RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
KDM1A-201ENST00000356634 CDC42BPAQ5VT25 1732 aa22.76■■□□□ 1.23
KDM1A-201ENST00000356634 USP19O94966 1318 aa22.76■■□□□ 1.23
KDM1A-201ENST00000356634 GZF1Q9H116 711 aaPredicted RBP22.74■■□□□ 1.23
KDM1A-201ENST00000356634 UPF2Q9HAU5 1272 aaKnown RBP22.74■■□□□ 1.23
KDM1A-201ENST00000356634 AMER1Q5JTC6 1135 aaPredicted RBP22.74■■□□□ 1.23
KDM1A-201ENST00000356634 NEUROD2Q15784 382 aa22.74■■□□□ 1.23
KDM1A-201ENST00000356634 RRAGDQ9NQL2 400 aaPredicted RBP22.73■■□□□ 1.23
KDM1A-201ENST00000356634 MAGI2Q86UL8 1455 aa22.73■■□□□ 1.23
KDM1A-201ENST00000356634 EIF3AQ14152 1382 aaKnown RBP22.72■■□□□ 1.23
KDM1A-201ENST00000356634 DMRT2Q9Y5R5 561 aa22.72■■□□□ 1.23
KDM1A-201ENST00000356634 L1TD1Q5T7N2 865 aaKnown RBP22.72■■□□□ 1.23
KDM1A-201ENST00000356634 CLUAP1Q96AJ1 413 aa22.72■■□□□ 1.23
KDM1A-201ENST00000356634 NKTRP30414 1462 aaKnown RBP22.71■■□□□ 1.23
KDM1A-201ENST00000356634 MAPK8IP3Q9UPT6 1336 aa22.7■■□□□ 1.23
KDM1A-201ENST00000356634 ADCY10Q96PN6 1610 aa22.7■■□□□ 1.22
KDM1A-201ENST00000356634 E9PSI1 815 aa22.7■■□□□ 1.22
KDM1A-201ENST00000356634 PRDM15P57071 1507 aaPredicted RBP22.7■■□□□ 1.22
KDM1A-201ENST00000356634 CGNL1Q0VF96 1302 aa22.7■■□□□ 1.22
KDM1A-201ENST00000356634 CENPJQ9HC77 1338 aaPredicted RBP22.69■■□□□ 1.22
KDM1A-201ENST00000356634 PLA2R1Q13018 1463 aa22.69■■□□□ 1.22
KDM1A-201ENST00000356634 NUP160Q12769 1436 aa22.68■■□□□ 1.22
KDM1A-201ENST00000356634 NAP1L5Q96NT1 182 aaPredicted RBP22.66■■□□□ 1.22
KDM1A-201ENST00000356634 ABCC10Q5T3U5 1492 aa22.66■■□□□ 1.22
KDM1A-201ENST00000356634 CDCA8Q53HL2 280 aa22.66■■□□□ 1.22
KDM1A-201ENST00000356634 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
KDM1A-201ENST00000356634 TRMT2AQ8IZ69 625 aaKnown RBP22.65■■□□□ 1.22
KDM1A-201ENST00000356634 BCL2L13Q9BXK5 485 aa22.65■■□□□ 1.22
KDM1A-201ENST00000356634 CCDC141Q6ZP82 1450 aa22.64■■□□□ 1.21
KDM1A-201ENST00000356634 AFAP1Q8N556 730 aa22.64■■□□□ 1.21
KDM1A-201ENST00000356634 GOLGA6L3A6NEY3 463 aa22.63■■□□□ 1.21
KDM1A-201ENST00000356634 PDE3AQ14432 1141 aa22.63■■□□□ 1.21
KDM1A-201ENST00000356634 RRP7AQ9Y3A4 280 aaKnown RBP22.63■■□□□ 1.21
KDM1A-201ENST00000356634 TBC1D2Q9BYX2 928 aa22.63■■□□□ 1.21
KDM1A-201ENST00000356634 TNNT2P45379 298 aaPredicted RBP22.61■■□□□ 1.21
KDM1A-201ENST00000356634 PANK2Q9BZ23 570 aa22.6■■□□□ 1.21
KDM1A-201ENST00000356634 XRCC6P12956 609 aaKnown RBP eCLIP22.59■■□□□ 1.21
KDM1A-201ENST00000356634 ANTXR1Q9H6X2 564 aa22.59■■□□□ 1.21
KDM1A-201ENST00000356634 TNNQ9UQP3 1299 aa22.59■■□□□ 1.21
KDM1A-201ENST00000356634 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.21
KDM1A-201ENST00000356634 PNNQ9H307 717 aaKnown RBP22.58■■□□□ 1.21
KDM1A-201ENST00000356634 PDZRN3Q9UPQ7 1066 aa22.58■■□□□ 1.21
KDM1A-201ENST00000356634 RSPH4AQ5TD94 716 aa22.57■■□□□ 1.2
KDM1A-201ENST00000356634 EIF2AK4Q9P2K8 1649 aaKnown RBP22.57■■□□□ 1.2
KDM1A-201ENST00000356634 ASXL1Q8IXJ9 1541 aa22.57■■□□□ 1.2
KDM1A-201ENST00000356634 PMFBP1Q8TBY8 1022 aa22.57■■□□□ 1.2
KDM1A-201ENST00000356634 TBC1D32Q96NH3 1257 aa22.57■■□□□ 1.2
KDM1A-201ENST00000356634 PCDHB15Q9Y5E8 787 aa22.57■■□□□ 1.2
KDM1A-201ENST00000356634 PIK3C2GO75747 1445 aa22.56■■□□□ 1.2
KDM1A-201ENST00000356634 WWC1Q8IX03 1113 aa22.56■■□□□ 1.2
KDM1A-201ENST00000356634 MYO5CQ9NQX4 1742 aa22.55■■□□□ 1.2
KDM1A-201ENST00000356634 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
KDM1A-201ENST00000356634 MFAP1P55081 439 aaKnown RBP22.54■■□□□ 1.2
KDM1A-201ENST00000356634 LAMC1P11047 1609 aa22.53■■□□□ 1.2
KDM1A-201ENST00000356634 RLBP1P12271 317 aa22.53■■□□□ 1.2
KDM1A-201ENST00000356634 MCM4P33991 863 aa22.53■■□□□ 1.2
KDM1A-201ENST00000356634 ABCA8O94911 1581 aa22.53■■□□□ 1.2
KDM1A-201ENST00000356634 ARHGEF5Q12774 1597 aa22.53■■□□□ 1.2
KDM1A-201ENST00000356634 SYCP2Q9BX26 1530 aa22.52■■□□□ 1.2
KDM1A-201ENST00000356634 SAMD9LQ8IVG5 1584 aa22.51■■□□□ 1.19
KDM1A-201ENST00000356634 CLASP1Q7Z460 1538 aa22.5■■□□□ 1.19
KDM1A-201ENST00000356634 RARSP54136 660 aaKnown RBP22.49■■□□□ 1.19
KDM1A-201ENST00000356634 NLRP1Q9C000 1473 aa22.49■■□□□ 1.19
KDM1A-201ENST00000356634 TRAK2O60296 914 aa22.49■■□□□ 1.19
KDM1A-201ENST00000356634 RWDD1Q9H446 243 aaPredicted RBP22.49■■□□□ 1.19
KDM1A-201ENST00000356634 VIRMAQ69YN4 1812 aaKnown RBP22.49■■□□□ 1.19
KDM1A-201ENST00000356634 GLIPR1L2Q4G1C9 344 aa22.48■■□□□ 1.19
KDM1A-201ENST00000356634 C22orf23Q9BZE7 217 aa22.47■■□□□ 1.19
KDM1A-201ENST00000356634 NINLQ9Y2I6 1382 aa22.47■■□□□ 1.19
KDM1A-201ENST00000356634 ABCC2Q92887 1545 aa22.45■■□□□ 1.19
KDM1A-201ENST00000356634 CARD14Q9BXL6 1004 aa22.45■■□□□ 1.18
KDM1A-201ENST00000356634 CHMP5Q9NZZ3 219 aa22.45■■□□□ 1.18
KDM1A-201ENST00000356634 CHGAP10645 457 aaKnown RBP22.45■■□□□ 1.18
KDM1A-201ENST00000356634 FTSJ3Q8IY81 847 aaKnown RBP22.45■■□□□ 1.18
KDM1A-201ENST00000356634 TCP11L2Q8N4U5 519 aa22.44■■□□□ 1.18
KDM1A-201ENST00000356634 SCAF11Q99590 1463 aaKnown RBP22.44■■□□□ 1.18
KDM1A-201ENST00000356634 HSP90AA1P07900 732 aaKnown RBP22.44■■□□□ 1.18
KDM1A-201ENST00000356634 SYNMO15061 1565 aa22.43■■□□□ 1.18
KDM1A-201ENST00000356634 FSD2A1L4K1 749 aa22.43■■□□□ 1.18
KDM1A-201ENST00000356634 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
KDM1A-201ENST00000356634 MYH16Q9H6N6 1097 aa22.42■■□□□ 1.18
KDM1A-201ENST00000356634 HSP90AA2PQ14568 343 aaPredicted RBP22.42■■□□□ 1.18
KDM1A-201ENST00000356634 VSIG10Q8N0Z9 540 aa22.42■■□□□ 1.18
KDM1A-201ENST00000356634 NGEFQ8N5V2 710 aa22.42■■□□□ 1.18
KDM1A-201ENST00000356634 HSCBQ8IWL3 235 aa22.41■■□□□ 1.18
KDM1A-201ENST00000356634 CLCN1P35523 988 aa22.41■■□□□ 1.18
KDM1A-201ENST00000356634 CFAP70Q5T0N1 1121 aa22.41■■□□□ 1.18
KDM1A-201ENST00000356634 EFCAB2Q5VUJ9 269 aa22.41■■□□□ 1.18
KDM1A-201ENST00000356634 TTC37Q6PGP7 1564 aa22.41■■□□□ 1.18
KDM1A-201ENST00000356634 UNC13BO14795 1591 aa22.41■■□□□ 1.18
KDM1A-201ENST00000356634 CDC42BPBQ9Y5S2 1711 aa22.4■■□□□ 1.18
KDM1A-201ENST00000356634 KIF3BO15066 747 aa22.4■■□□□ 1.18
KDM1A-201ENST00000356634 MRE11P49959 708 aa22.4■■□□□ 1.18
KDM1A-201ENST00000356634 NPC1L1Q9UHC9 1359 aa22.39■■□□□ 1.18
KDM1A-201ENST00000356634 NUTM2DQ5VT03 806 aaPredicted RBP22.39■■□□□ 1.17
KDM1A-201ENST00000356634 RUNDC1Q96C34 613 aa22.39■■□□□ 1.17
KDM1A-201ENST00000356634 TRIM44Q96DX7 344 aaPredicted RBP22.38■■□□□ 1.17
KDM1A-201ENST00000356634 RNF17Q9BXT8 1623 aaKnown RBP22.38■■□□□ 1.17
KDM1A-201ENST00000356634 TRAPPC8Q9Y2L5 1435 aa22.38■■□□□ 1.17
KDM1A-201ENST00000356634 GRPEL1Q9HAV7 217 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms