RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 NFXL1Q6ZNB6 911 aa6.36□□□□□ -1.39
CKAP5-202ENST00000354558 SMG6Q86US8 1419 aaKnown RBP6.36□□□□□ -1.39
CKAP5-202ENST00000354558 HMMRO75330 724 aa6.36□□□□□ -1.39
CKAP5-202ENST00000354558 SCLT1Q96NL6 688 aa6.36□□□□□ -1.39
CKAP5-202ENST00000354558 ZPR1O75312 459 aa6.36□□□□□ -1.39
CKAP5-202ENST00000354558 ANKRD30AQ9BXX3 1397 aa6.36□□□□□ -1.39
CKAP5-202ENST00000354558 AIMP1Q12904 312 aaKnown RBP6.35□□□□□ -1.39
CKAP5-202ENST00000354558 ABTB2Q8N961 1025 aa6.35□□□□□ -1.39
CKAP5-202ENST00000354558 NUP155O75694 1391 aa6.35□□□□□ -1.39
CKAP5-202ENST00000354558 NOL8Q76FK4 1167 aaKnown RBP6.35□□□□□ -1.39
CKAP5-202ENST00000354558 RIC3Q7Z5B4 369 aa6.35□□□□□ -1.39
CKAP5-202ENST00000354558 GOLGA3Q08378 1498 aa6.35□□□□□ -1.39
CKAP5-202ENST00000354558 DRC1Q96MC2 740 aa6.35□□□□□ -1.39
CKAP5-202ENST00000354558 ECM2O94769 699 aaPredicted RBP6.34□□□□□ -1.39
CKAP5-202ENST00000354558 MATR3P43243 847 aaKnown RBP eCLIP6.34□□□□□ -1.39
CKAP5-202ENST00000354558 CCDC47Q96A33 483 aaKnown RBP6.34□□□□□ -1.39
CKAP5-202ENST00000354558 PHF14O94880 888 aa6.34□□□□□ -1.39
CKAP5-202ENST00000354558 TATP17735 454 aaPredicted RBP6.34□□□□□ -1.39
CKAP5-202ENST00000354558 TRIM29Q14134 588 aa6.34□□□□□ -1.39
CKAP5-202ENST00000354558 CT47A1Q5JQC4 288 aaPredicted RBP6.34□□□□□ -1.39
CKAP5-202ENST00000354558 PCMTD1Q96MG8 357 aaPredicted RBP6.34□□□□□ -1.39
CKAP5-202ENST00000354558 BCL2L13Q9BXK5 485 aa6.34□□□□□ -1.39
CKAP5-202ENST00000354558 PRDM11Q9NQV5 511 aa6.34□□□□□ -1.39
CKAP5-202ENST00000354558 CABP4P57796 275 aa6.34□□□□□ -1.4
CKAP5-202ENST00000354558 FHAD1B1AJZ9 1412 aa6.34□□□□□ -1.4
CKAP5-202ENST00000354558 ZFYVE27Q5T4F4 411 aa6.33□□□□□ -1.4
CKAP5-202ENST00000354558 UACAQ9BZF9 1416 aa6.33□□□□□ -1.4
CKAP5-202ENST00000354558 WWC3Q9ULE0 1092 aa6.33□□□□□ -1.4
CKAP5-202ENST00000354558 HSCBQ8IWL3 235 aa6.33□□□□□ -1.4
CKAP5-202ENST00000354558 AK7Q96M32 723 aa6.33□□□□□ -1.4
CKAP5-202ENST00000354558 SF3A1Q15459 793 aaKnown RBP6.33□□□□□ -1.4
CKAP5-202ENST00000354558 AIDAQ96BJ3 306 aa6.33□□□□□ -1.4
CKAP5-202ENST00000354558 C8orf37Q96NL8 207 aa6.33□□□□□ -1.4
CKAP5-202ENST00000354558 EVC2Q86UK5 1308 aa6.32□□□□□ -1.4
CKAP5-202ENST00000354558 GPR162Q16538 588 aa6.32□□□□□ -1.4
CKAP5-202ENST00000354558 ZNF622Q969S3 477 aaKnown RBP eCLIP6.32□□□□□ -1.45e-9■■□□□ 12.1
CKAP5-202ENST00000354558 NEBLO76041 1014 aa6.32□□□□□ -1.4
CKAP5-202ENST00000354558 SLC3A2P08195 630 aaKnown RBP6.32□□□□□ -1.4
CKAP5-202ENST00000354558 GNL3LQ9NVN8 582 aaKnown RBP6.32□□□□□ -1.4
CKAP5-202ENST00000354558 XPCQ01831 940 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-202ENST00000354558 SART3Q15020 963 aaKnown RBP6.32□□□□□ -1.4
CKAP5-202ENST00000354558 H3BQV1 296 aa6.32□□□□□ -1.4
CKAP5-202ENST00000354558 NLRP6P59044 892 aa6.32□□□□□ -1.4
CKAP5-202ENST00000354558 TRDNQ13061 729 aa6.32□□□□□ -1.4
CKAP5-202ENST00000354558 IFFO2Q5TF58 517 aa6.32□□□□□ -1.4
CKAP5-202ENST00000354558 SLKQ9H2G2 1235 aaPredicted RBP6.32□□□□□ -1.4
CKAP5-202ENST00000354558 LMOD1P29536 600 aaPredicted RBP6.31□□□□□ -1.4
CKAP5-202ENST00000354558 PRDM2Q13029 1718 aa6.31□□□□□ -1.4
CKAP5-202ENST00000354558 TRIM21P19474 475 aaKnown RBP6.31□□□□□ -1.4
CKAP5-202ENST00000354558 NEUROD6Q96NK8 337 aa6.31□□□□□ -1.4
CKAP5-202ENST00000354558 CNNM1Q9NRU3 951 aa6.31□□□□□ -1.4
CKAP5-202ENST00000354558 TSR1Q2NL82 804 aaKnown RBP6.31□□□□□ -1.4
CKAP5-202ENST00000354558 EP400NLQ6ZTU2 488 aa6.31□□□□□ -1.4
CKAP5-202ENST00000354558 ZMYND15Q9H091 742 aa6.31□□□□□ -1.4
CKAP5-202ENST00000354558 RRP7AQ9Y3A4 280 aaKnown RBP6.31□□□□□ -1.4
CKAP5-202ENST00000354558 EEA1Q15075 1411 aa6.31□□□□□ -1.4
CKAP5-202ENST00000354558 B4GALNT3Q6L9W6 998 aa6.31□□□□□ -1.4
CKAP5-202ENST00000354558 RPGRQ92834 1020 aaKnown RBP6.31□□□□□ -1.4
CKAP5-202ENST00000354558 TPM3P06753 285 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 NF2P35240 595 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 PMFBP1Q8TBY8 1022 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 CEP162Q5TB80 1403 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 FAM184AQ8NB25 1140 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 KTN1Q86UP2 1357 aaKnown RBP6.3□□□□□ -1.4
CKAP5-202ENST00000354558 EPS15P42566 896 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 KIF3AQ9Y496 699 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 WASHC4Q2M389 1173 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 RILPL2Q969X0 211 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 ARHGAP35Q9NRY4 1499 aa6.3□□□□□ -1.4
CKAP5-202ENST00000354558 NOP2P46087 812 aaKnown RBP6.29□□□□□ -1.4
CKAP5-202ENST00000354558 RSPH4AQ5TD94 716 aa6.29□□□□□ -1.4
CKAP5-202ENST00000354558 SPG7Q9UQ90 795 aa6.29□□□□□ -1.4
CKAP5-202ENST00000354558 KIF16BQ96L93 1317 aa6.29□□□□□ -1.4
CKAP5-202ENST00000354558 IFIT2P09913 472 aaKnown RBP6.29□□□□□ -1.4
CKAP5-202ENST00000354558 G3BP1Q13283 466 aaKnown RBP eCLIP6.29□□□□□ -1.41e-6■■■■□ 19.5
CKAP5-202ENST00000354558 ZNF408Q9H9D4 720 aa6.29□□□□□ -1.4
CKAP5-202ENST00000354558 PPP6R1Q9UPN7 881 aa6.29□□□□□ -1.4
CKAP5-202ENST00000354558 CPLX2Q6PUV4 134 aaKnown RBP6.28□□□□□ -1.4
CKAP5-202ENST00000354558 KDM4AO75164 1064 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 TBC1D2BQ9UPU7 963 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 PLEKHO1Q53GL0 409 aaPredicted RBP6.28□□□□□ -1.4
CKAP5-202ENST00000354558 KCNA4P22459 653 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 TTC16Q8NEE8 873 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 MCTP1Q6DN14 999 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 CCDC146Q8IYE0 955 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 BRMS1Q9HCU9 246 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 ANKIB1Q9P2G1 1089 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 ZNF652Q9Y2D9 606 aa6.28□□□□□ -1.4
CKAP5-202ENST00000354558 ELL2O00472 640 aaPredicted RBP6.27□□□□□ -1.4
CKAP5-202ENST00000354558 CCDC18Q5T9S5 1454 aa6.27□□□□□ -1.4
CKAP5-202ENST00000354558 LMTK3Q96Q04 1460 aa6.27□□□□□ -1.4
CKAP5-202ENST00000354558 MYO1BO43795 1136 aa6.27□□□□□ -1.41
CKAP5-202ENST00000354558 STK11IPQ8N1F8 1099 aa6.27□□□□□ -1.41
CKAP5-202ENST00000354558 DNAI2Q9GZS0 605 aa6.27□□□□□ -1.41
CKAP5-202ENST00000354558 PODXL2Q9NZ53 605 aa6.27□□□□□ -1.41
CKAP5-202ENST00000354558 GTF3C3Q9Y5Q9 886 aa6.27□□□□□ -1.41
CKAP5-202ENST00000354558 TTC39AQ5SRH9 613 aa6.27□□□□□ -1.41
CKAP5-202ENST00000354558 CRACR2BQ8N4Y2 399 aaPredicted RBP6.27□□□□□ -1.41
CKAP5-202ENST00000354558 CPLX1O14810 134 aa6.27□□□□□ -1.41
CKAP5-202ENST00000354558 TSPYL4Q9UJ04 414 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms