RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 MAP3K4Q9Y6R4 1608 aa21.09■□□□□ 0.97
MBD1-205ENST00000353909 BRD4O60885 1362 aaPredicted RBP21.09■□□□□ 0.97
MBD1-205ENST00000353909 RIMBP3CA6NJZ7 1639 aa21.09■□□□□ 0.97
MBD1-205ENST00000353909 RIMBP3BA6NNM3 1639 aa21.09■□□□□ 0.97
MBD1-205ENST00000353909 RIMBP3Q9UFD9 1639 aa21.09■□□□□ 0.97
MBD1-205ENST00000353909 DIP2CQ9Y2E4 1556 aa21.08■□□□□ 0.97
MBD1-205ENST00000353909 ABCC3O15438 1527 aa21.08■□□□□ 0.97
MBD1-205ENST00000353909 NEURL4Q96JN8 1562 aa21.08■□□□□ 0.96
MBD1-205ENST00000353909 RICTORQ6R327 1708 aa21.08■□□□□ 0.96
MBD1-205ENST00000353909 NOS1P29475 1434 aa21.08■□□□□ 0.96
MBD1-205ENST00000353909 FAM69CQ0P6D2 419 aa21.06■□□□□ 0.96
MBD1-205ENST00000353909 LRPPRCP42704 1394 aaKnown RBP21.06■□□□□ 0.96
MBD1-205ENST00000353909 MYOM2P54296 1465 aa21.06■□□□□ 0.96
MBD1-205ENST00000353909 IFT172Q9UG01 1749 aa21.06■□□□□ 0.96
MBD1-205ENST00000353909 MYT1Q01538 1121 aa21.06■□□□□ 0.96
MBD1-205ENST00000353909 NLRP13Q86W25 1043 aa21.06■□□□□ 0.96
MBD1-205ENST00000353909 ADGRB3O60242 1522 aa21.04■□□□□ 0.96
MBD1-205ENST00000353909 SIGLEC1Q9BZZ2 1709 aa21.04■□□□□ 0.96
MBD1-205ENST00000353909 KIAA1210Q9ULL0 1709 aa21.03■□□□□ 0.96
MBD1-205ENST00000353909 NUTM2DQ5VT03 806 aaPredicted RBP21.03■□□□□ 0.96
MBD1-205ENST00000353909 CAMSAP1Q5T5Y3 1602 aa21.01■□□□□ 0.95
MBD1-205ENST00000353909 TSHZ2Q9NRE2 1034 aa21.01■□□□□ 0.95
MBD1-205ENST00000353909 NRXN1Q9ULB1 1477 aa21.01■□□□□ 0.95
MBD1-205ENST00000353909 SALL2Q9Y467 1007 aaPredicted RBP21■□□□□ 0.95
MBD1-205ENST00000353909 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
MBD1-205ENST00000353909 EIF3AQ14152 1382 aaKnown RBP20.99■□□□□ 0.95
MBD1-205ENST00000353909 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
MBD1-205ENST00000353909 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
MBD1-205ENST00000353909 GLI2P10070 1586 aa20.98■□□□□ 0.95
MBD1-205ENST00000353909 KNSTRNQ9Y448 316 aa20.97■□□□□ 0.95
MBD1-205ENST00000353909 SMG6Q86US8 1419 aaKnown RBP20.97■□□□□ 0.95
MBD1-205ENST00000353909 SYNMO15061 1565 aa20.96■□□□□ 0.95
MBD1-205ENST00000353909 AMER1Q5JTC6 1135 aaPredicted RBP20.96■□□□□ 0.95
MBD1-205ENST00000353909 TRAK1Q9UPV9 953 aa20.96■□□□□ 0.95
MBD1-205ENST00000353909 PPLO60437 1756 aa20.96■□□□□ 0.95
MBD1-205ENST00000353909 CDCA8Q53HL2 280 aa20.96■□□□□ 0.95
MBD1-205ENST00000353909 DIP2BQ9P265 1576 aa20.96■□□□□ 0.95
MBD1-205ENST00000353909 MYOM1P52179 1685 aa20.96■□□□□ 0.95
MBD1-205ENST00000353909 NUDCQ9Y266 331 aa20.96■□□□□ 0.95
MBD1-205ENST00000353909 ERVK-7P63135 1459 aa20.95■□□□□ 0.94
MBD1-205ENST00000353909 PIK3C2GO75747 1445 aa20.95■□□□□ 0.94
MBD1-205ENST00000353909 IDI1Q13907 227 aa20.95■□□□□ 0.94
MBD1-205ENST00000353909 C14orf93Q9H972 538 aaKnown RBP20.94■□□□□ 0.94
MBD1-205ENST00000353909 PIK3C2BO00750 1634 aa20.9■□□□□ 0.94
MBD1-205ENST00000353909 KDM5AP29375 1690 aaKnown RBP20.9■□□□□ 0.94
MBD1-205ENST00000353909 FBXO31Q5XUX0 539 aaPredicted RBP20.9■□□□□ 0.94
MBD1-205ENST00000353909 PPP2R1AP30153 589 aa20.9■□□□□ 0.94
MBD1-205ENST00000353909 CENPJQ9HC77 1338 aaPredicted RBP20.89■□□□□ 0.94
MBD1-205ENST00000353909 ADGRB1O14514 1584 aa20.89■□□□□ 0.93
MBD1-205ENST00000353909 CARD14Q9BXL6 1004 aa20.88■□□□□ 0.93
MBD1-205ENST00000353909 ARHGAP31Q2M1Z3 1444 aa20.88■□□□□ 0.93
MBD1-205ENST00000353909 RPGRIP1LQ68CZ1 1315 aa20.88■□□□□ 0.93
MBD1-205ENST00000353909 SETBP1Q9Y6X0 1596 aa20.87■□□□□ 0.93
MBD1-205ENST00000353909 ASXL1Q8IXJ9 1541 aa20.86■□□□□ 0.93
MBD1-205ENST00000353909 NEXMIFQ5QGS0 1516 aa20.86■□□□□ 0.93
MBD1-205ENST00000353909 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
MBD1-205ENST00000353909 ZMYM4Q5VZL5 1548 aa20.85■□□□□ 0.93
MBD1-205ENST00000353909 MYO3AQ8NEV4 1616 aa20.84■□□□□ 0.93
MBD1-205ENST00000353909 ZC3H13Q5T200 1668 aaKnown RBP20.84■□□□□ 0.93
MBD1-205ENST00000353909 MYO5BQ9ULV0 1848 aa20.84■□□□□ 0.93
MBD1-205ENST00000353909 B4GALNT3Q6L9W6 998 aa20.84■□□□□ 0.93
MBD1-205ENST00000353909 CDCA7LQ96GN5 454 aa20.84■□□□□ 0.93
MBD1-205ENST00000353909 VGFO15240 615 aaPredicted RBP20.83■□□□□ 0.93
MBD1-205ENST00000353909 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.93
MBD1-205ENST00000353909 SBNO2Q9Y2G9 1366 aa20.83■□□□□ 0.92
MBD1-205ENST00000353909 SLC52A1Q9NWF4 448 aa20.82■□□□□ 0.92
MBD1-205ENST00000353909 PREX1Q8TCU6 1659 aa20.81■□□□□ 0.92
MBD1-205ENST00000353909 RNF123Q5XPI4 1314 aa20.81■□□□□ 0.92
MBD1-205ENST00000353909 MLECQ14165 292 aa20.81■□□□□ 0.92
MBD1-205ENST00000353909 ERICH6BQ5W0A0 696 aa20.81■□□□□ 0.92
MBD1-205ENST00000353909 SLC12A5Q9H2X9 1139 aa20.81■□□□□ 0.92
MBD1-205ENST00000353909 BLMP54132 1417 aaPredicted RBP20.81■□□□□ 0.92
MBD1-205ENST00000353909 QRICH2Q9H0J4 1663 aa20.8■□□□□ 0.92
MBD1-205ENST00000353909 SAFB2Q14151 953 aaKnown RBP eCLIP20.8■□□□□ 0.92
MBD1-205ENST00000353909 SLC24A1O60721 1099 aa20.79■□□□□ 0.92
MBD1-205ENST00000353909 STK26Q9P289 416 aa20.78■□□□□ 0.92
MBD1-205ENST00000353909 NPC1L1Q9UHC9 1359 aa20.77■□□□□ 0.92
MBD1-205ENST00000353909 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.91
MBD1-205ENST00000353909 WDR43Q15061 677 aaKnown RBP eCLIP20.74■□□□□ 0.91
MBD1-205ENST00000353909 ARHGEF28Q8N1W1 1705 aaKnown RBP20.73■□□□□ 0.91
MBD1-205ENST00000353909 KIF13AQ9H1H9 1805 aa20.72■□□□□ 0.91
MBD1-205ENST00000353909 NSD3Q9BZ95 1437 aa20.72■□□□□ 0.91
MBD1-205ENST00000353909 CABP2Q9NPB3 220 aa20.72■□□□□ 0.91
MBD1-205ENST00000353909 INSRP06213 1382 aa20.71■□□□□ 0.91
MBD1-205ENST00000353909 PDE3BQ13370 1112 aa20.71■□□□□ 0.91
MBD1-205ENST00000353909 TNNT2P45379 298 aaPredicted RBP20.71■□□□□ 0.91
MBD1-205ENST00000353909 RCAN3Q9UKA8 241 aa20.71■□□□□ 0.91
MBD1-205ENST00000353909 CLTCQ00610 1675 aaKnown RBP20.71■□□□□ 0.91
MBD1-205ENST00000353909 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
MBD1-205ENST00000353909 CCDC146Q8IYE0 955 aa20.7■□□□□ 0.9
MBD1-205ENST00000353909 TULP4Q9NRJ4 1543 aa20.7■□□□□ 0.9
MBD1-205ENST00000353909 PLEKHH1Q9ULM0 1364 aa20.7■□□□□ 0.9
MBD1-205ENST00000353909 STAG3Q9UJ98 1225 aa20.7■□□□□ 0.9
MBD1-205ENST00000353909 AGLP35573 1532 aa20.68■□□□□ 0.9
MBD1-205ENST00000353909 RBM19Q9Y4C8 960 aaKnown RBP20.68■□□□□ 0.9
MBD1-205ENST00000353909 REREQ9P2R6 1566 aa20.68■□□□□ 0.9
MBD1-205ENST00000353909 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
MBD1-205ENST00000353909 EVC2Q86UK5 1308 aa20.67■□□□□ 0.9
MBD1-205ENST00000353909 PRAM1Q96QH2 718 aa20.64■□□□□ 0.9
MBD1-205ENST00000353909 MINK1Q8N4C8 1332 aaPredicted RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms