RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 SETD5Q9C0A6 1442 aa31.13■■■□□ 2.57
MRPL39-202ENST00000352957 KIF1BO60333 1816 aa31.1■■■□□ 2.57
MRPL39-202ENST00000352957 HDGFP51858 240 aaKnown RBP31.08■■■□□ 2.57
MRPL39-202ENST00000352957 PPP1R15AO75807 674 aaPredicted RBP31.07■■■□□ 2.56
MRPL39-202ENST00000352957 PLEKHG1Q9ULL1 1385 aa31.06■■■□□ 2.56
MRPL39-202ENST00000352957 SLC26A8Q96RN1 970 aa31.06■■■□□ 2.56
MRPL39-202ENST00000352957 SENP3Q9H4L4 574 aaPredicted RBP31.06■■■□□ 2.56
MRPL39-202ENST00000352957 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.05■■■□□ 2.56
MRPL39-202ENST00000352957 BCANQ96GW7 911 aa31.05■■■□□ 2.56
MRPL39-202ENST00000352957 NUTM2DQ5VT03 806 aaPredicted RBP31.04■■■□□ 2.56
MRPL39-202ENST00000352957 RAB3GAP2Q9H2M9 1393 aa31.04■■■□□ 2.56
MRPL39-202ENST00000352957 FOXD1Q16676 465 aa31.03■■■□□ 2.56
MRPL39-202ENST00000352957 LRRC7Q96NW7 1537 aa31.03■■■□□ 2.56
MRPL39-202ENST00000352957 MPHOSPH9Q99550 1183 aa31.02■■■□□ 2.56
MRPL39-202ENST00000352957 ZNF326Q5BKZ1 582 aaKnown RBP30.99■■■□□ 2.55
MRPL39-202ENST00000352957 ACIN1Q9UKV3 1341 aaKnown RBP30.98■■■□□ 2.55
MRPL39-202ENST00000352957 XIRP1Q702N8 1843 aaKnown RBP30.97■■■□□ 2.55
MRPL39-202ENST00000352957 UBAP1LF5GYI3 381 aa30.97■■■□□ 2.55
MRPL39-202ENST00000352957 NEXMIFQ5QGS0 1516 aa30.95■■■□□ 2.55
MRPL39-202ENST00000352957 NWD1Q149M9 1564 aa30.95■■■□□ 2.54
MRPL39-202ENST00000352957 CHD2O14647 1828 aaKnown RBP30.94■■■□□ 2.54
MRPL39-202ENST00000352957 ADAMTS13Q76LX8 1427 aa30.93■■■□□ 2.54
MRPL39-202ENST00000352957 KCNA6P17658 529 aa30.93■■■□□ 2.54
MRPL39-202ENST00000352957 DIP2AQ14689 1571 aa30.92■■■□□ 2.54
MRPL39-202ENST00000352957 NRXN3Q9Y4C0 1643 aa30.91■■■□□ 2.54
MRPL39-202ENST00000352957 TBX22Q9Y458 520 aa30.89■■■□□ 2.54
MRPL39-202ENST00000352957 CCDC144AA2RUR9 1427 aa30.88■■■□□ 2.53
MRPL39-202ENST00000352957 SETBP1Q9Y6X0 1596 aa30.88■■■□□ 2.53
MRPL39-202ENST00000352957 NKTRP30414 1462 aaKnown RBP30.87■■■□□ 2.53
MRPL39-202ENST00000352957 ALKQ9UM73 1620 aa30.87■■■□□ 2.53
MRPL39-202ENST00000352957 PPLO60437 1756 aa30.86■■■□□ 2.53
MRPL39-202ENST00000352957 TOM1O60784 492 aa30.85■■■□□ 2.53
MRPL39-202ENST00000352957 TMEM94Q12767 1356 aa30.82■■■□□ 2.52
MRPL39-202ENST00000352957 PROSER2Q86WR7 435 aaPredicted RBP30.82■■■□□ 2.52
MRPL39-202ENST00000352957 SCAF1Q9H7N4 1312 aaKnown RBP30.79■■■□□ 2.52
MRPL39-202ENST00000352957 HRCP23327 699 aa30.79■■■□□ 2.52
MRPL39-202ENST00000352957 PIP4K2BP78356 416 aa30.79■■■□□ 2.52
MRPL39-202ENST00000352957 RBM33Q96EV2 1170 aaKnown RBP30.79■■■□□ 2.52
MRPL39-202ENST00000352957 PIK3R4Q99570 1358 aa30.79■■■□□ 2.52
MRPL39-202ENST00000352957 RPGRIP1LQ68CZ1 1315 aa30.78■■■□□ 2.52
MRPL39-202ENST00000352957 SPATA31E1Q6ZUB1 1445 aa30.77■■■□□ 2.52
MRPL39-202ENST00000352957 IFT172Q9UG01 1749 aa30.76■■■□□ 2.52
MRPL39-202ENST00000352957 PTPRUQ92729 1446 aa30.75■■■□□ 2.51
MRPL39-202ENST00000352957 VGFO15240 615 aaPredicted RBP30.75■■■□□ 2.51
MRPL39-202ENST00000352957 SETD1AO15047 1707 aaKnown RBP30.73■■■□□ 2.51
MRPL39-202ENST00000352957 XRN1Q8IZH2 1706 aaKnown RBP30.73■■■□□ 2.51
MRPL39-202ENST00000352957 RGL3Q3MIN7 710 aa30.72■■■□□ 2.51
MRPL39-202ENST00000352957 METP08581 1390 aa30.71■■■□□ 2.51
MRPL39-202ENST00000352957 AMOTL2Q9Y2J4 779 aa30.7■■■□□ 2.51
MRPL39-202ENST00000352957 ANKRD30BQ9BXX2 1392 aa30.66■■■□□ 2.5
MRPL39-202ENST00000352957 MSH6P52701 1360 aa30.65■■■□□ 2.5
MRPL39-202ENST00000352957 ADGRF5Q8IZF2 1346 aa30.63■■■□□ 2.49
MRPL39-202ENST00000352957 NCOA3Q9Y6Q9 1424 aa30.63■■■□□ 2.49
MRPL39-202ENST00000352957 HSPA1LP34931 641 aa30.62■■■□□ 2.49
MRPL39-202ENST00000352957 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.6■■■□□ 2.49
MRPL39-202ENST00000352957 C14orf37Q86TY3 774 aa30.58■■■□□ 2.49
MRPL39-202ENST00000352957 ROBO1Q9Y6N7 1651 aa30.55■■■□□ 2.48
MRPL39-202ENST00000352957 PIK3C2GO75747 1445 aa30.54■■■□□ 2.48
MRPL39-202ENST00000352957 MYOM2P54296 1465 aa30.52■■■□□ 2.48
MRPL39-202ENST00000352957 FAM135BQ49AJ0 1406 aa30.52■■■□□ 2.48
MRPL39-202ENST00000352957 C19orf44Q9H6X5 657 aa30.51■■■□□ 2.47
MRPL39-202ENST00000352957 NALCNQ8IZF0 1738 aa30.5■■■□□ 2.47
MRPL39-202ENST00000352957 SLAIN2Q9P270 581 aa30.49■■■□□ 2.47
MRPL39-202ENST00000352957 NRXN1Q9ULB1 1477 aa30.49■■■□□ 2.47
MRPL39-202ENST00000352957 PTCH1Q13635 1447 aa30.48■■■□□ 2.47
MRPL39-202ENST00000352957 ASXL1Q8IXJ9 1541 aa30.48■■■□□ 2.47
MRPL39-202ENST00000352957 PRAG1Q86YV5 1406 aa30.47■■■□□ 2.47
MRPL39-202ENST00000352957 ROBO2Q9HCK4 1378 aa30.46■■■□□ 2.47
MRPL39-202ENST00000352957 ATF3P18847 181 aa30.45■■■□□ 2.47
MRPL39-202ENST00000352957 CADPS2Q86UW7 1296 aa30.45■■■□□ 2.47
MRPL39-202ENST00000352957 LAMC1P11047 1609 aa30.44■■■□□ 2.46
MRPL39-202ENST00000352957 DCCP43146 1447 aa30.44■■■□□ 2.46
MRPL39-202ENST00000352957 ADGRL3Q9HAR2 1447 aa30.44■■■□□ 2.46
MRPL39-202ENST00000352957 KNDC1Q76NI1 1749 aa30.42■■■□□ 2.46
MRPL39-202ENST00000352957 TMEM132EQ6IEE7 984 aa30.41■■■□□ 2.46
MRPL39-202ENST00000352957 TRIM26Q12899 539 aaPredicted RBP30.39■■■□□ 2.46
MRPL39-202ENST00000352957 C14orf93Q9H972 538 aaKnown RBP30.39■■■□□ 2.46
MRPL39-202ENST00000352957 DCAF11Q8TEB1 546 aa30.38■■■□□ 2.45
MRPL39-202ENST00000352957 STK26Q9P289 416 aa30.38■■■□□ 2.45
MRPL39-202ENST00000352957 LRPPRCP42704 1394 aaKnown RBP30.38■■■□□ 2.45
MRPL39-202ENST00000352957 PHLPP1O60346 1717 aa30.37■■■□□ 2.45
MRPL39-202ENST00000352957 CFAP70Q5T0N1 1121 aa30.37■■■□□ 2.45
MRPL39-202ENST00000352957 KDM2AQ9Y2K7 1162 aa30.37■■■□□ 2.45
MRPL39-202ENST00000352957 DHX57Q6P158 1386 aaKnown RBP30.37■■■□□ 2.45
MRPL39-202ENST00000352957 TECPR2O15040 1411 aa30.37■■■□□ 2.45
MRPL39-202ENST00000352957 MST1RQ04912 1400 aa30.35■■■□□ 2.45
MRPL39-202ENST00000352957 YTHDC2Q9H6S0 1430 aaKnown RBP30.35■■■□□ 2.45
MRPL39-202ENST00000352957 DISP3Q9P2K9 1392 aa30.34■■■□□ 2.45
MRPL39-202ENST00000352957 ABCC11Q96J66 1382 aa30.33■■■□□ 2.45
MRPL39-202ENST00000352957 MED1Q15648 1581 aaPredicted RBP30.32■■■□□ 2.45
MRPL39-202ENST00000352957 STAC3Q96MF2 364 aa30.29■■■□□ 2.44
MRPL39-202ENST00000352957 WAPLQ7Z5K2 1190 aa30.28■■■□□ 2.44
MRPL39-202ENST00000352957 COL16A1Q07092 1604 aaPredicted RBP30.28■■■□□ 2.44
MRPL39-202ENST00000352957 AHDC1Q5TGY3 1603 aaPredicted RBP30.28■■■□□ 2.44
MRPL39-202ENST00000352957 ADGRB1O14514 1584 aa30.28■■■□□ 2.44
MRPL39-202ENST00000352957 BRINP3Q76B58 766 aa30.27■■■□□ 2.44
MRPL39-202ENST00000352957 PLEKHH1Q9ULM0 1364 aa30.27■■■□□ 2.44
MRPL39-202ENST00000352957 CDC42BPGQ6DT37 1551 aa30.25■■■□□ 2.43
MRPL39-202ENST00000352957 C1orf167Q5SNV9 1468 aa30.23■■■□□ 2.43
MRPL39-202ENST00000352957 NHSL1Q5SYE7 1610 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms