RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 CFAP70Q5T0N1 1121 aa28.89■■■□□ 2.22
PTPN18-202ENST00000347849 STAC3Q96MF2 364 aa28.87■■■□□ 2.21
PTPN18-202ENST00000347849 TSPOAP1O95153 1857 aa28.87■■■□□ 2.21
PTPN18-202ENST00000347849 PPP4R2Q9NY27 417 aa28.86■■■□□ 2.21
PTPN18-202ENST00000347849 NEURL4Q96JN8 1562 aa28.85■■■□□ 2.21
PTPN18-202ENST00000347849 ERICH6BQ5W0A0 696 aa28.85■■■□□ 2.21
PTPN18-202ENST00000347849 KIF1BO60333 1816 aa28.84■■■□□ 2.21
PTPN18-202ENST00000347849 TMF1P82094 1093 aa28.83■■■□□ 2.21
PTPN18-202ENST00000347849 IQGAP1P46940 1657 aa28.83■■■□□ 2.21
PTPN18-202ENST00000347849 PER1O15534 1290 aaPredicted RBP28.82■■■□□ 2.2
PTPN18-202ENST00000347849 SIGLEC1Q9BZZ2 1709 aa28.81■■■□□ 2.2
PTPN18-202ENST00000347849 SCAF11Q99590 1463 aaKnown RBP28.81■■■□□ 2.2
PTPN18-202ENST00000347849 ADGRB3O60242 1522 aa28.81■■■□□ 2.2
PTPN18-202ENST00000347849 ERICH6Q7L0X2 663 aa28.81■■■□□ 2.2
PTPN18-202ENST00000347849 NOS1P29475 1434 aa28.8■■■□□ 2.2
PTPN18-202ENST00000347849 CAMSAP1Q5T5Y3 1602 aa28.8■■■□□ 2.2
PTPN18-202ENST00000347849 MYOM2P54296 1465 aa28.8■■■□□ 2.2
PTPN18-202ENST00000347849 PANK3Q9H999 370 aa28.78■■■□□ 2.2
PTPN18-202ENST00000347849 IFT172Q9UG01 1749 aa28.77■■■□□ 2.2
PTPN18-202ENST00000347849 B4GALNT3Q6L9W6 998 aa28.75■■■□□ 2.19
PTPN18-202ENST00000347849 NUTM2DQ5VT03 806 aaPredicted RBP28.74■■■□□ 2.19
PTPN18-202ENST00000347849 NRXN1Q9ULB1 1477 aa28.74■■■□□ 2.19
PTPN18-202ENST00000347849 ZMYM4Q5VZL5 1548 aa28.73■■■□□ 2.19
PTPN18-202ENST00000347849 SYNMO15061 1565 aa28.73■■■□□ 2.19
PTPN18-202ENST00000347849 SENP3-EIF4A1A0A087X0R7 540 aa28.72■■■□□ 2.19
PTPN18-202ENST00000347849 KIAA1210Q9ULL0 1709 aa28.71■■■□□ 2.19
PTPN18-202ENST00000347849 PNISRQ8TF01 805 aaKnown RBP28.7■■■□□ 2.19
PTPN18-202ENST00000347849 TMC1Q8TDI8 760 aa28.7■■■□□ 2.18
PTPN18-202ENST00000347849 ZBED9Q6R2W3 1325 aa28.7■■■□□ 2.18
PTPN18-202ENST00000347849 IDI1Q13907 227 aa28.69■■■□□ 2.18
PTPN18-202ENST00000347849 RALBP1Q15311 655 aa28.69■■■□□ 2.18
PTPN18-202ENST00000347849 CC2D1BQ5T0F9 858 aaKnown RBP28.69■■■□□ 2.18
PTPN18-202ENST00000347849 MYBBP1AQ9BQG0 1328 aaKnown RBP28.69■■■□□ 2.18
PTPN18-202ENST00000347849 ARHGAP31Q2M1Z3 1444 aa28.67■■■□□ 2.18
PTPN18-202ENST00000347849 PARD3Q8TEW0 1356 aa28.67■■■□□ 2.18
PTPN18-202ENST00000347849 FBXO31Q5XUX0 539 aaPredicted RBP28.66■■■□□ 2.18
PTPN18-202ENST00000347849 KTN1Q86UP2 1357 aaKnown RBP28.66■■■□□ 2.18
PTPN18-202ENST00000347849 TMEM132EQ6IEE7 984 aa28.65■■■□□ 2.18
PTPN18-202ENST00000347849 PIK3C2GO75747 1445 aa28.65■■■□□ 2.18
PTPN18-202ENST00000347849 PIK3C2BO00750 1634 aa28.65■■■□□ 2.18
PTPN18-202ENST00000347849 PPLO60437 1756 aa28.64■■■□□ 2.18
PTPN18-202ENST00000347849 SENP3Q9H4L4 574 aaPredicted RBP28.64■■■□□ 2.17
PTPN18-202ENST00000347849 EIF3AQ14152 1382 aaKnown RBP28.63■■■□□ 2.17
PTPN18-202ENST00000347849 C14orf93Q9H972 538 aaKnown RBP28.62■■■□□ 2.17
PTPN18-202ENST00000347849 ZC3H13Q5T200 1668 aaKnown RBP28.61■■■□□ 2.17
PTPN18-202ENST00000347849 TRAK1Q9UPV9 953 aa28.61■■■□□ 2.17
PTPN18-202ENST00000347849 KIF13AQ9H1H9 1805 aa28.6■■■□□ 2.17
PTPN18-202ENST00000347849 BRD4O60885 1362 aaPredicted RBP28.6■■■□□ 2.17
PTPN18-202ENST00000347849 RPGRIP1LQ68CZ1 1315 aa28.59■■■□□ 2.17
PTPN18-202ENST00000347849 MLECQ14165 292 aa28.58■■■□□ 2.17
PTPN18-202ENST00000347849 ERVK-7P63135 1459 aa28.57■■■□□ 2.16
PTPN18-202ENST00000347849 NLRP13Q86W25 1043 aa28.56■■■□□ 2.16
PTPN18-202ENST00000347849 NEXMIFQ5QGS0 1516 aa28.56■■■□□ 2.16
PTPN18-202ENST00000347849 ADGRB1O14514 1584 aa28.55■■■□□ 2.16
PTPN18-202ENST00000347849 CDCA8Q53HL2 280 aa28.55■■■□□ 2.16
PTPN18-202ENST00000347849 SLC52A1Q9NWF4 448 aa28.54■■■□□ 2.16
PTPN18-202ENST00000347849 LRPPRCP42704 1394 aaKnown RBP28.54■■■□□ 2.16
PTPN18-202ENST00000347849 PREX1Q8TCU6 1659 aa28.54■■■□□ 2.16
PTPN18-202ENST00000347849 SETBP1Q9Y6X0 1596 aa28.52■■■□□ 2.16
PTPN18-202ENST00000347849 MYOM1P52179 1685 aa28.51■■■□□ 2.15
PTPN18-202ENST00000347849 VGFO15240 615 aaPredicted RBP28.51■■■□□ 2.15
PTPN18-202ENST00000347849 CENPJQ9HC77 1338 aaPredicted RBP28.51■■■□□ 2.15
PTPN18-202ENST00000347849 AMER1Q5JTC6 1135 aaPredicted RBP28.5■■■□□ 2.15
PTPN18-202ENST00000347849 KNSTRNQ9Y448 316 aa28.5■■■□□ 2.15
PTPN18-202ENST00000347849 REREQ9P2R6 1566 aa28.49■■■□□ 2.15
PTPN18-202ENST00000347849 AGLP35573 1532 aa28.49■■■□□ 2.15
PTPN18-202ENST00000347849 MYO5BQ9ULV0 1848 aa28.47■■■□□ 2.15
PTPN18-202ENST00000347849 TMEM131LA2VDJ0 1609 aa28.46■■■□□ 2.15
PTPN18-202ENST00000347849 MYO3AQ8NEV4 1616 aa28.46■■■□□ 2.15
PTPN18-202ENST00000347849 KDM5AP29375 1690 aaKnown RBP28.45■■■□□ 2.14
PTPN18-202ENST00000347849 CLTCQ00610 1675 aaKnown RBP28.43■■■□□ 2.14
PTPN18-202ENST00000347849 SBNO2Q9Y2G9 1366 aa28.43■■■□□ 2.14
PTPN18-202ENST00000347849 CARD14Q9BXL6 1004 aa28.43■■■□□ 2.14
PTPN18-202ENST00000347849 SMG6Q86US8 1419 aaKnown RBP28.41■■■□□ 2.14
PTPN18-202ENST00000347849 ARHGEF40Q8TER5 1519 aa28.4■■■□□ 2.14
PTPN18-202ENST00000347849 NUDCQ9Y266 331 aa28.39■■■□□ 2.14
PTPN18-202ENST00000347849 PPP2R1AP30153 589 aa28.38■■■□□ 2.13
PTPN18-202ENST00000347849 PPP6R1Q9UPN7 881 aa28.38■■■□□ 2.13
PTPN18-202ENST00000347849 STK26Q9P289 416 aa28.38■■■□□ 2.13
PTPN18-202ENST00000347849 SALL2Q9Y467 1007 aaPredicted RBP28.38■■■□□ 2.13
PTPN18-202ENST00000347849 ASXL1Q8IXJ9 1541 aa28.38■■■□□ 2.13
PTPN18-202ENST00000347849 ZFYVE9O95405 1425 aa28.37■■■□□ 2.13
PTPN18-202ENST00000347849 SLC24A1O60721 1099 aa28.37■■■□□ 2.13
PTPN18-202ENST00000347849 SAFB2Q14151 953 aaKnown RBP eCLIP28.37■■■□□ 2.13
PTPN18-202ENST00000347849 QRICH2Q9H0J4 1663 aa28.37■■■□□ 2.13
PTPN18-202ENST00000347849 CCDC136Q96JN2 1154 aa28.36■■■□□ 2.13
PTPN18-202ENST00000347849 NOP58Q9Y2X3 529 aaKnown RBP28.36■■■□□ 2.13
PTPN18-202ENST00000347849 STAG3Q9UJ98 1225 aa28.35■■■□□ 2.13
PTPN18-202ENST00000347849 SLC12A5Q9H2X9 1139 aa28.35■■■□□ 2.13
PTPN18-202ENST00000347849 PAK3O75914 559 aaPredicted RBP28.32■■■□□ 2.12
PTPN18-202ENST00000347849 DEKP35659 375 aaKnown RBP28.32■■■□□ 2.12
PTPN18-202ENST00000347849 RNF123Q5XPI4 1314 aa28.3■■■□□ 2.12
PTPN18-202ENST00000347849 ARHGEF28Q8N1W1 1705 aaKnown RBP28.3■■■□□ 2.12
PTPN18-202ENST00000347849 SPATA31D1Q6ZQQ2 1576 aa28.29■■■□□ 2.12
PTPN18-202ENST00000347849 NBR1Q14596 966 aa28.29■■■□□ 2.12
PTPN18-202ENST00000347849 ZMYM3Q14202 1370 aa28.28■■■□□ 2.12
PTPN18-202ENST00000347849 NPC1L1Q9UHC9 1359 aa28.27■■■□□ 2.12
PTPN18-202ENST00000347849 A2ML1A8K2U0 1454 aa28.27■■■□□ 2.12
PTPN18-202ENST00000347849 ADAMTS8Q9UP79 889 aa28.27■■■□□ 2.12
PTPN18-202ENST00000347849 TULP4Q9NRJ4 1543 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms