RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 NRXN1Q9ULB1 1477 aa34.97■■■■□ 3.19
TRADD-201ENST00000345057 CHGAP10645 457 aaKnown RBP34.96■■■■□ 3.19
TRADD-201ENST00000345057 IQGAP1P46940 1657 aa34.93■■■■□ 3.18
TRADD-201ENST00000345057 SCAF11Q99590 1463 aaKnown RBP34.93■■■■□ 3.18
TRADD-201ENST00000345057 PPLO60437 1756 aa34.92■■■■□ 3.18
TRADD-201ENST00000345057 EIF3AQ14152 1382 aaKnown RBP34.89■■■■□ 3.18
TRADD-201ENST00000345057 CLTCQ00610 1675 aaKnown RBP34.89■■■■□ 3.18
TRADD-201ENST00000345057 ERVK-7P63135 1459 aa34.88■■■■□ 3.17
TRADD-201ENST00000345057 ADGRF5Q8IZF2 1346 aa34.87■■■■□ 3.17
TRADD-201ENST00000345057 POLR3GLQ9BT43 218 aa34.84■■■■□ 3.17
TRADD-201ENST00000345057 IDI1Q13907 227 aa34.83■■■■□ 3.17
TRADD-201ENST00000345057 SETBP1Q9Y6X0 1596 aa34.82■■■■□ 3.17
TRADD-201ENST00000345057 SLC24A1O60721 1099 aa34.82■■■■□ 3.17
TRADD-201ENST00000345057 TMF1P82094 1093 aa34.82■■■■□ 3.17
TRADD-201ENST00000345057 TESK2Q96S53 571 aa34.82■■■■□ 3.17
TRADD-201ENST00000345057 ESF1Q9H501 851 aaKnown RBP34.82■■■■□ 3.17
TRADD-201ENST00000345057 PIK3C2GO75747 1445 aa34.82■■■■□ 3.16
TRADD-201ENST00000345057 VGFO15240 615 aaPredicted RBP34.81■■■■□ 3.16
TRADD-201ENST00000345057 SPATA31D1Q6ZQQ2 1576 aa34.8■■■■□ 3.16
TRADD-201ENST00000345057 NEXMIFQ5QGS0 1516 aa34.79■■■■□ 3.16
TRADD-201ENST00000345057 CFAP70Q5T0N1 1121 aa34.78■■■■□ 3.16
TRADD-201ENST00000345057 ZFYVE9O95405 1425 aa34.77■■■■□ 3.16
TRADD-201ENST00000345057 MLECQ14165 292 aa34.77■■■■□ 3.16
TRADD-201ENST00000345057 TMEM131LA2VDJ0 1609 aa34.77■■■■□ 3.16
TRADD-201ENST00000345057 PRKRIP1Q9H875 184 aaPredicted RBP34.76■■■■□ 3.16
TRADD-201ENST00000345057 CDCA8Q53HL2 280 aa34.73■■■■□ 3.15
TRADD-201ENST00000345057 C14orf93Q9H972 538 aaKnown RBP34.73■■■■□ 3.15
TRADD-201ENST00000345057 FBXO31Q5XUX0 539 aaPredicted RBP34.72■■■■□ 3.15
TRADD-201ENST00000345057 DISP3Q9P2K9 1392 aa34.7■■■■□ 3.15
TRADD-201ENST00000345057 ZMYM3Q14202 1370 aa34.67■■■■□ 3.14
TRADD-201ENST00000345057 MYO3AQ8NEV4 1616 aa34.65■■■■□ 3.14
TRADD-201ENST00000345057 STAG3Q9UJ98 1225 aa34.64■■■■□ 3.14
TRADD-201ENST00000345057 KTN1Q86UP2 1357 aaKnown RBP34.64■■■■□ 3.14
TRADD-201ENST00000345057 MYO5BQ9ULV0 1848 aa34.63■■■■□ 3.13
TRADD-201ENST00000345057 ADGRB1O14514 1584 aa34.63■■■■□ 3.13
TRADD-201ENST00000345057 SBNO2Q9Y2G9 1366 aa34.6■■■■□ 3.13
TRADD-201ENST00000345057 A2ML1A8K2U0 1454 aa34.55■■■■□ 3.12
TRADD-201ENST00000345057 CENPJQ9HC77 1338 aaPredicted RBP34.52■■■■□ 3.12
TRADD-201ENST00000345057 KDM5AP29375 1690 aaKnown RBP34.51■■■■□ 3.11
TRADD-201ENST00000345057 TNRQ92752 1358 aa34.5■■■■□ 3.11
TRADD-201ENST00000345057 RALBP1Q15311 655 aa34.5■■■■□ 3.11
TRADD-201ENST00000345057 NUTM2DQ5VT03 806 aaPredicted RBP34.49■■■■□ 3.11
TRADD-201ENST00000345057 MRS2Q9HD23 443 aa34.46■■■■□ 3.11
TRADD-201ENST00000345057 TRAK1Q9UPV9 953 aa34.46■■■■□ 3.11
TRADD-201ENST00000345057 RIMS2Q9UQ26 1411 aa34.44■■■■□ 3.1
TRADD-201ENST00000345057 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.44■■■■□ 3.1
TRADD-201ENST00000345057 PER1O15534 1290 aaPredicted RBP34.44■■■■□ 3.1
TRADD-201ENST00000345057 TMEM132EQ6IEE7 984 aa34.44■■■■□ 3.1
TRADD-201ENST00000345057 PANK3Q9H999 370 aa34.44■■■■□ 3.1
TRADD-201ENST00000345057 HDGFP51858 240 aaKnown RBP34.43■■■■□ 3.1
TRADD-201ENST00000345057 QRICH2Q9H0J4 1663 aa34.43■■■■□ 3.1
TRADD-201ENST00000345057 ARHGEF28Q8N1W1 1705 aaKnown RBP34.39■■■■□ 3.1
TRADD-201ENST00000345057 NLRP1Q9C000 1473 aa34.39■■■■□ 3.1
TRADD-201ENST00000345057 MYBBP1AQ9BQG0 1328 aaKnown RBP34.38■■■■□ 3.09
TRADD-201ENST00000345057 FER1L4A9Z1Z3 1794 aa34.38■■■■□ 3.09
TRADD-201ENST00000345057 ALKQ9UM73 1620 aa34.38■■■■□ 3.09
TRADD-201ENST00000345057 MYOM1P52179 1685 aa34.36■■■■□ 3.09
TRADD-201ENST00000345057 ASXL1Q8IXJ9 1541 aa34.36■■■■□ 3.09
TRADD-201ENST00000345057 PARD3Q8TEW0 1356 aa34.35■■■■□ 3.09
TRADD-201ENST00000345057 CCDC184Q52MB2 194 aa34.33■■■■□ 3.09
TRADD-201ENST00000345057 PUS7Q96PZ0 661 aaKnown RBP34.33■■■■□ 3.09
TRADD-201ENST00000345057 BRD4O60885 1362 aaPredicted RBP34.32■■■■□ 3.08
TRADD-201ENST00000345057 KNSTRNQ9Y448 316 aa34.31■■■■□ 3.08
TRADD-201ENST00000345057 C3P01024 1663 aa34.31■■■■□ 3.08
TRADD-201ENST00000345057 YTHDC2Q9H6S0 1430 aaKnown RBP34.31■■■■□ 3.08
TRADD-201ENST00000345057 UBR1Q8IWV7 1749 aa34.31■■■■□ 3.08
TRADD-201ENST00000345057 SCAF1Q9H7N4 1312 aaKnown RBP34.31■■■■□ 3.08
TRADD-201ENST00000345057 CNGB1Q14028 1251 aaPredicted RBP34.29■■■■□ 3.08
TRADD-201ENST00000345057 EVC2Q86UK5 1308 aa34.27■■■■□ 3.08
TRADD-201ENST00000345057 TMC1Q8TDI8 760 aa34.27■■■■□ 3.08
TRADD-201ENST00000345057 TMEM2Q9UHN6 1383 aa34.26■■■■□ 3.07
TRADD-201ENST00000345057 NPC1L1Q9UHC9 1359 aa34.25■■■■□ 3.07
TRADD-201ENST00000345057 NLRP13Q86W25 1043 aa34.24■■■■□ 3.07
TRADD-201ENST00000345057 GTF3C3Q9Y5Q9 886 aa34.24■■■■□ 3.07
TRADD-201ENST00000345057 FAM9BQ8IZU0 186 aa34.24■■■■□ 3.07
TRADD-201ENST00000345057 PTPRMP28827 1452 aa34.23■■■■□ 3.07
TRADD-201ENST00000345057 HNRNPUQ00839 825 aaKnown RBP eCLIP34.23■■■■□ 3.07
TRADD-201ENST00000345057 DLC1Q96QB1 1528 aa34.22■■■■□ 3.07
TRADD-201ENST00000345057 SETD1AO15047 1707 aaKnown RBP34.21■■■■□ 3.07
TRADD-201ENST00000345057 STK26Q9P289 416 aa34.2■■■■□ 3.07
TRADD-201ENST00000345057 CC2D1BQ5T0F9 858 aaKnown RBP34.19■■■■□ 3.06
TRADD-201ENST00000345057 LRPPRCP42704 1394 aaKnown RBP34.19■■■■□ 3.06
TRADD-201ENST00000345057 NRXN3Q9Y4C0 1643 aa34.17■■■■□ 3.06
TRADD-201ENST00000345057 CEBPAP49715 358 aaPredicted RBP34.17■■■■□ 3.06
TRADD-201ENST00000345057 KDM4FA0A1W2PPD8 638 aa34.16■■■■□ 3.06
TRADD-201ENST00000345057 POGKQ9P215 609 aa34.16■■■■□ 3.06
TRADD-201ENST00000345057 TULP4Q9NRJ4 1543 aa34.16■■■■□ 3.06
TRADD-201ENST00000345057 AMER1Q5JTC6 1135 aaPredicted RBP34.15■■■■□ 3.06
TRADD-201ENST00000345057 ABCC11Q96J66 1382 aa34.14■■■■□ 3.06
TRADD-201ENST00000345057 NINLQ9Y2I6 1382 aa34.14■■■■□ 3.06
TRADD-201ENST00000345057 PNISRQ8TF01 805 aaKnown RBP34.13■■■■□ 3.05
TRADD-201ENST00000345057 PRAM1Q96QH2 718 aa34.13■■■■□ 3.05
TRADD-201ENST00000345057 SENP3Q9H4L4 574 aaPredicted RBP34.11■■■■□ 3.05
TRADD-201ENST00000345057 SLIT1O75093 1534 aa34.09■■■■□ 3.05
TRADD-201ENST00000345057 PLEKHG1Q9ULL1 1385 aa34.09■■■■□ 3.05
TRADD-201ENST00000345057 EID1Q9Y6B2 187 aa34.09■■■■□ 3.05
TRADD-201ENST00000345057 ATAD2Q6PL18 1390 aa34.07■■■■□ 3.04
TRADD-201ENST00000345057 ARHGAP23Q9P227 1491 aa34.06■■■■□ 3.04
TRADD-201ENST00000345057 KNDC1Q76NI1 1749 aa34.06■■■■□ 3.04
TRADD-201ENST00000345057 THEMISQ8N1K5 641 aaPredicted RBP34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms