RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 CNTLNQ9NXG0 1405 aa20.41■□□□□ 0.86
AP3D1-201ENST00000345016 NGDNQ8NEJ9 315 aaKnown RBP20.4■□□□□ 0.86
AP3D1-201ENST00000345016 CCDC9Q9Y3X0 531 aaKnown RBP20.39■□□□□ 0.86
AP3D1-201ENST00000345016 NCBP3Q53F19 620 aaKnown RBP20.39■□□□□ 0.86
AP3D1-201ENST00000345016 ZKSCAN1P17029 563 aaPredicted RBP20.39■□□□□ 0.85
AP3D1-201ENST00000345016 RNF214Q8ND24 703 aa20.39■□□□□ 0.85
AP3D1-201ENST00000345016 PDE4CQ08493 712 aa20.39■□□□□ 0.85
AP3D1-201ENST00000345016 RIPK4P57078 832 aa20.38■□□□□ 0.85
AP3D1-201ENST00000345016 BICD2Q8TD16 824 aa20.38■□□□□ 0.85
AP3D1-201ENST00000345016 API5Q9BZZ5 524 aaKnown RBP20.38■□□□□ 0.85
AP3D1-201ENST00000345016 GPS2Q13227 327 aa20.38■□□□□ 0.85
AP3D1-201ENST00000345016 WASHC2CQ9Y4E1 1318 aa20.38■□□□□ 0.85
AP3D1-201ENST00000345016 VPS37CA5D8V6 355 aaPredicted RBP20.37■□□□□ 0.85
AP3D1-201ENST00000345016 HOMER1Q86YM7 354 aa20.37■□□□□ 0.85
AP3D1-201ENST00000345016 TPD52L1Q16890 204 aaPredicted RBP20.36■□□□□ 0.85
AP3D1-201ENST00000345016 RUFY2Q8WXA3 655 aa20.36■□□□□ 0.85
AP3D1-201ENST00000345016 ADAMTS8Q9UP79 889 aa20.36■□□□□ 0.85
AP3D1-201ENST00000345016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.36■□□□□ 0.85
AP3D1-201ENST00000345016 INTS3Q68E01 1043 aaKnown RBP20.36■□□□□ 0.85
AP3D1-201ENST00000345016 RUNDC1Q96C34 613 aa20.35■□□□□ 0.85
AP3D1-201ENST00000345016 TSR1Q2NL82 804 aaKnown RBP20.35■□□□□ 0.85
AP3D1-201ENST00000345016 BACH2Q9BYV9 841 aa20.35■□□□□ 0.85
AP3D1-201ENST00000345016 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
AP3D1-201ENST00000345016 SMC3Q9UQE7 1217 aa20.33■□□□□ 0.85
AP3D1-201ENST00000345016 DIAPH1O60610 1272 aaKnown RBP20.33■□□□□ 0.84
AP3D1-201ENST00000345016 EVC2Q86UK5 1308 aa20.33■□□□□ 0.84
AP3D1-201ENST00000345016 CHMP4CQ96CF2 233 aa20.33■□□□□ 0.84
AP3D1-201ENST00000345016 MAP7D2Q96T17 732 aa20.32■□□□□ 0.84
AP3D1-201ENST00000345016 TPM1P09493 284 aa20.32■□□□□ 0.84
AP3D1-201ENST00000345016 AAMPQ13685 434 aa20.32■□□□□ 0.84
AP3D1-201ENST00000345016 CAVIN1Q6NZI2 390 aaKnown RBP20.31■□□□□ 0.84
AP3D1-201ENST00000345016 COG3Q96JB2 828 aa20.31■□□□□ 0.84
AP3D1-201ENST00000345016 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
AP3D1-201ENST00000345016 BRD4O60885 1362 aaPredicted RBP20.31■□□□□ 0.84
AP3D1-201ENST00000345016 TEX35Q5T0J7 233 aa20.3■□□□□ 0.84
AP3D1-201ENST00000345016 BCL11BQ9C0K0 894 aaPredicted RBP20.3■□□□□ 0.84
AP3D1-201ENST00000345016 CPLX2Q6PUV4 134 aaKnown RBP20.29■□□□□ 0.84
AP3D1-201ENST00000345016 SASS6Q6UVJ0 657 aa20.29■□□□□ 0.84
AP3D1-201ENST00000345016 AKNAQ7Z591 1439 aa20.29■□□□□ 0.84
AP3D1-201ENST00000345016 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
AP3D1-201ENST00000345016 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
AP3D1-201ENST00000345016 CCDC39Q9UFE4 941 aa20.29■□□□□ 0.84
AP3D1-201ENST00000345016 MTERF4Q7Z6M4 381 aaKnown RBP20.28■□□□□ 0.84
AP3D1-201ENST00000345016 UACAQ9BZF9 1416 aa20.28■□□□□ 0.84
AP3D1-201ENST00000345016 MINK1Q8N4C8 1332 aaPredicted RBP20.28■□□□□ 0.84
AP3D1-201ENST00000345016 C9orf78Q9NZ63 289 aaPredicted RBP20.28■□□□□ 0.84
AP3D1-201ENST00000345016 CDC45O75419 566 aa20.27■□□□□ 0.84
AP3D1-201ENST00000345016 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
AP3D1-201ENST00000345016 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
AP3D1-201ENST00000345016 IFIT2P09913 472 aaKnown RBP20.26■□□□□ 0.83
AP3D1-201ENST00000345016 FKBP5Q13451 457 aaPredicted RBP20.26■□□□□ 0.83
AP3D1-201ENST00000345016 FBXW7Q969H0 707 aa20.26■□□□□ 0.83
AP3D1-201ENST00000345016 TPM2P07951 284 aa20.26■□□□□ 0.83
AP3D1-201ENST00000345016 JPH4Q96JJ6 628 aa20.26■□□□□ 0.83
AP3D1-201ENST00000345016 CPLX1O14810 134 aa20.25■□□□□ 0.83
AP3D1-201ENST00000345016 VGFO15240 615 aaPredicted RBP20.25■□□□□ 0.83
AP3D1-201ENST00000345016 RBM10P98175 930 aaKnown RBP20.25■□□□□ 0.83
AP3D1-201ENST00000345016 TEFQ10587 303 aa20.25■□□□□ 0.83
AP3D1-201ENST00000345016 CEP89Q96ST8 783 aa20.25■□□□□ 0.83
AP3D1-201ENST00000345016 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
AP3D1-201ENST00000345016 AKAP17AQ02040 695 aaKnown RBP20.24■□□□□ 0.83
AP3D1-201ENST00000345016 CCDC70Q6NSX1 233 aa20.24■□□□□ 0.83
AP3D1-201ENST00000345016 IPO7O95373 1038 aaKnown RBP20.24■□□□□ 0.83
AP3D1-201ENST00000345016 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
AP3D1-201ENST00000345016 MNS1Q8NEH6 495 aa20.24■□□□□ 0.83
AP3D1-201ENST00000345016 MARCH6O60337 910 aa20.23■□□□□ 0.83
AP3D1-201ENST00000345016 PRPF40AO75400 957 aaKnown RBP20.23■□□□□ 0.83
AP3D1-201ENST00000345016 CCDC73Q6ZRK6 1079 aa20.23■□□□□ 0.83
AP3D1-201ENST00000345016 TCP11L2Q8N4U5 519 aa20.22■□□□□ 0.83
AP3D1-201ENST00000345016 MBD3O95983 291 aa20.22■□□□□ 0.83
AP3D1-201ENST00000345016 PKNOX2Q96KN3 472 aa20.22■□□□□ 0.83
AP3D1-201ENST00000345016 GNAI1P63096 354 aa20.22■□□□□ 0.83
AP3D1-201ENST00000345016 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
AP3D1-201ENST00000345016 ROCK1Q13464 1354 aa20.22■□□□□ 0.83
AP3D1-201ENST00000345016 ARGLU1Q9NWB6 273 aaPredicted RBP20.21■□□□□ 0.83
AP3D1-201ENST00000345016 ZNF644Q9H582 1327 aaPredicted RBP20.21■□□□□ 0.83
AP3D1-201ENST00000345016 SYNE3Q6ZMZ3 975 aa20.21■□□□□ 0.83
AP3D1-201ENST00000345016 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
AP3D1-201ENST00000345016 CCDC184Q52MB2 194 aa20.21■□□□□ 0.83
AP3D1-201ENST00000345016 PDS5BQ9NTI5 1447 aa20.21■□□□□ 0.83
AP3D1-201ENST00000345016 NEK4P51957 841 aa20.2■□□□□ 0.82
AP3D1-201ENST00000345016 NEXNQ0ZGT2 675 aa20.2■□□□□ 0.82
AP3D1-201ENST00000345016 MSH5O43196 834 aa20.2■□□□□ 0.82
AP3D1-201ENST00000345016 TRIM29Q14134 588 aa20.2■□□□□ 0.82
AP3D1-201ENST00000345016 CCDC173Q0VFZ6 552 aa20.2■□□□□ 0.82
AP3D1-201ENST00000345016 HMOX1P09601 288 aa20.19■□□□□ 0.82
AP3D1-201ENST00000345016 PNISRQ8TF01 805 aaKnown RBP20.19■□□□□ 0.82
AP3D1-201ENST00000345016 FOSBP53539 338 aa20.19■□□□□ 0.82
AP3D1-201ENST00000345016 PDE3AQ14432 1141 aa20.19■□□□□ 0.82
AP3D1-201ENST00000345016 BCAR3O75815 825 aa20.19■□□□□ 0.82
AP3D1-201ENST00000345016 TRIM5Q9C035 493 aa20.17■□□□□ 0.82
AP3D1-201ENST00000345016 CADPSQ9ULU8 1353 aa20.17■□□□□ 0.82
AP3D1-201ENST00000345016 MTHFSP49914 203 aa20.17■□□□□ 0.82
AP3D1-201ENST00000345016 HMGN5P82970 282 aaKnown RBP20.17■□□□□ 0.82
AP3D1-201ENST00000345016 GGNBP2Q9H3C7 697 aa20.17■□□□□ 0.82
AP3D1-201ENST00000345016 LRRFIP1Q32MZ4 808 aaKnown RBP20.17■□□□□ 0.82
AP3D1-201ENST00000345016 ANKRD20A12PQ8NF67 263 aa20.17■□□□□ 0.82
AP3D1-201ENST00000345016 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.821e-6■■■□□ 14.9
AP3D1-201ENST00000345016 PCMTD1Q96MG8 357 aaPredicted RBP20.16■□□□□ 0.82
AP3D1-201ENST00000345016 GRPEL1Q9HAV7 217 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms