RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 GNL2Q13823 731 aaKnown RBP10.76□□□□□ -0.69
FGD6-201ENST00000343958 NGEFQ8N5V2 710 aa10.76□□□□□ -0.69
FGD6-201ENST00000343958 TCP11L2Q8N4U5 519 aa10.75□□□□□ -0.69
FGD6-201ENST00000343958 GORABQ5T7V8 394 aa10.75□□□□□ -0.69
FGD6-201ENST00000343958 ST18O60284 1047 aa10.75□□□□□ -0.69
FGD6-201ENST00000343958 USP35Q9P2H5 1018 aa10.75□□□□□ -0.69
FGD6-201ENST00000343958 EXOSC9Q06265 439 aaKnown RBP10.75□□□□□ -0.69
FGD6-201ENST00000343958 DDX49Q9Y6V7 483 aaKnown RBP10.74□□□□□ -0.69
FGD6-201ENST00000343958 PNISRQ8TF01 805 aaKnown RBP10.74□□□□□ -0.69
FGD6-201ENST00000343958 KIAA1107Q9UPP5 1409 aa10.74□□□□□ -0.69
FGD6-201ENST00000343958 CHAF1AQ13111 956 aaPredicted RBP10.74□□□□□ -0.69
FGD6-201ENST00000343958 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
FGD6-201ENST00000343958 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
FGD6-201ENST00000343958 GPATCH3Q96I76 525 aa10.74□□□□□ -0.69
FGD6-201ENST00000343958 PDZRN3Q9UPQ7 1066 aa10.74□□□□□ -0.69
FGD6-201ENST00000343958 HFM1A2PYH4 1435 aa10.74□□□□□ -0.69
FGD6-201ENST00000343958 DDX11L8A8MPP1 907 aa10.73□□□□□ -0.69
FGD6-201ENST00000343958 SKAP1Q86WV1 359 aa10.73□□□□□ -0.69
FGD6-201ENST00000343958 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
FGD6-201ENST00000343958 API5Q9BZZ5 524 aaKnown RBP10.73□□□□□ -0.69
FGD6-201ENST00000343958 NFKBIBQ15653 356 aa10.73□□□□□ -0.69
FGD6-201ENST00000343958 NUTM2GQ5VZR2 741 aa10.73□□□□□ -0.69
FGD6-201ENST00000343958 ISY1Q9ULR0 285 aaKnown RBP10.73□□□□□ -0.69
FGD6-201ENST00000343958 TSR2Q969E8 191 aaKnown RBP10.72□□□□□ -0.69
FGD6-201ENST00000343958 KIAA2012Q0VF49 1180 aa10.72□□□□□ -0.69
FGD6-201ENST00000343958 SYAP1Q96A49 352 aaPredicted RBP10.72□□□□□ -0.69
FGD6-201ENST00000343958 SLC12A5Q9H2X9 1139 aa10.72□□□□□ -0.69
FGD6-201ENST00000343958 DAPK1P53355 1430 aa10.72□□□□□ -0.69
FGD6-201ENST00000343958 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
FGD6-201ENST00000343958 POLA1P09884 1462 aaPredicted RBP10.71□□□□□ -0.69
FGD6-201ENST00000343958 C1orf115Q9H7X2 142 aa10.71□□□□□ -0.69
FGD6-201ENST00000343958 TIAM1Q13009 1591 aa10.71□□□□□ -0.7
FGD6-201ENST00000343958 NRDCO43847 1150 aa10.71□□□□□ -0.7
FGD6-201ENST00000343958 OSCARQ8IYS5 282 aa10.71□□□□□ -0.7
FGD6-201ENST00000343958 CHMP5Q9NZZ3 219 aa10.71□□□□□ -0.7
FGD6-201ENST00000343958 DNAJC5BQ9UF47 199 aa10.71□□□□□ -0.7
FGD6-201ENST00000343958 C22orf23Q9BZE7 217 aa10.7□□□□□ -0.7
FGD6-201ENST00000343958 TSPYL4Q9UJ04 414 aa10.7□□□□□ -0.7
FGD6-201ENST00000343958 TOPBP1Q92547 1522 aa10.7□□□□□ -0.7
FGD6-201ENST00000343958 FAM69CQ0P6D2 419 aa10.7□□□□□ -0.7
FGD6-201ENST00000343958 TOP2BQ02880 1626 aa10.7□□□□□ -0.7
FGD6-201ENST00000343958 ARHGAP5Q13017 1502 aa10.7□□□□□ -0.7
FGD6-201ENST00000343958 C1orf141Q5JVX7 400 aa10.7□□□□□ -0.7
FGD6-201ENST00000343958 NAIPQ13075 1403 aa10.7□□□□□ -0.7
FGD6-201ENST00000343958 GNAI1P63096 354 aa10.69□□□□□ -0.7
FGD6-201ENST00000343958 C9orf84Q5VXU9 1444 aa10.69□□□□□ -0.7
FGD6-201ENST00000343958 EHBP1L1Q8N3D4 1523 aa10.69□□□□□ -0.7
FGD6-201ENST00000343958 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
FGD6-201ENST00000343958 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.69□□□□□ -0.7
FGD6-201ENST00000343958 KIF16BQ96L93 1317 aa10.69□□□□□ -0.7
FGD6-201ENST00000343958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.69□□□□□ -0.7
FGD6-201ENST00000343958 CDK13Q14004 1512 aaKnown RBP10.69□□□□□ -0.7
FGD6-201ENST00000343958 TEFQ10587 303 aa10.69□□□□□ -0.7
FGD6-201ENST00000343958 TOMM22Q9NS69 142 aa10.69□□□□□ -0.7
FGD6-201ENST00000343958 HTATSF1O43719 755 aaKnown RBP10.68□□□□□ -0.7
FGD6-201ENST00000343958 PRKAR2BP31323 418 aa10.68□□□□□ -0.7
FGD6-201ENST00000343958 SMG6Q86US8 1419 aaKnown RBP10.68□□□□□ -0.7
FGD6-201ENST00000343958 ANO2Q9NQ90 1003 aa10.68□□□□□ -0.7
FGD6-201ENST00000343958 PRAM1Q96QH2 718 aa10.68□□□□□ -0.7
FGD6-201ENST00000343958 NOB1Q9ULX3 412 aaKnown RBP10.67□□□□□ -0.7
FGD6-201ENST00000343958 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
FGD6-201ENST00000343958 SNAPC4Q5SXM2 1469 aa10.67□□□□□ -0.7
FGD6-201ENST00000343958 CHMP4AQ9BY43 222 aa10.67□□□□□ -0.7
FGD6-201ENST00000343958 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
FGD6-201ENST00000343958 ERBINQ96RT1 1412 aa10.66□□□□□ -0.7
FGD6-201ENST00000343958 EFCAB5A4FU69 1503 aa10.66□□□□□ -0.7
FGD6-201ENST00000343958 DIAPH3Q9NSV4 1193 aa10.66□□□□□ -0.7
FGD6-201ENST00000343958 HDAC5Q9UQL6 1122 aa10.66□□□□□ -0.7
FGD6-201ENST00000343958 MCTP1Q6DN14 999 aa10.66□□□□□ -0.7
FGD6-201ENST00000343958 CSPP1Q1MSJ5 1256 aa10.65□□□□□ -0.7
FGD6-201ENST00000343958 FRAT2O75474 233 aaPredicted RBP10.65□□□□□ -0.7
FGD6-201ENST00000343958 MSH5O43196 834 aa10.65□□□□□ -0.7
FGD6-201ENST00000343958 SKOR2Q2VWA4 1001 aaPredicted RBP10.65□□□□□ -0.7
FGD6-201ENST00000343958 TXNDC2Q86VQ3 553 aa10.65□□□□□ -0.7
FGD6-201ENST00000343958 BACH2Q9BYV9 841 aa10.65□□□□□ -0.71
FGD6-201ENST00000343958 SYNJ2O15056 1496 aa10.64□□□□□ -0.71
FGD6-201ENST00000343958 FOSBP53539 338 aa10.64□□□□□ -0.71
FGD6-201ENST00000343958 C9orf78Q9NZ63 289 aaPredicted RBP10.64□□□□□ -0.71
FGD6-201ENST00000343958 SCAPERQ9BY12 1400 aa10.64□□□□□ -0.71
FGD6-201ENST00000343958 IFIT2P09913 472 aaKnown RBP10.64□□□□□ -0.71
FGD6-201ENST00000343958 CDC45O75419 566 aa10.64□□□□□ -0.71
FGD6-201ENST00000343958 MRC2Q9UBG0 1479 aa10.64□□□□□ -0.71
FGD6-201ENST00000343958 H3BQV1 296 aa10.64□□□□□ -0.71
FGD6-201ENST00000343958 IFFO2Q5TF58 517 aa10.64□□□□□ -0.71
FGD6-201ENST00000343958 INTS3Q68E01 1043 aaKnown RBP10.64□□□□□ -0.71
FGD6-201ENST00000343958 CABP1Q9NZU7 370 aa10.64□□□□□ -0.71
FGD6-201ENST00000343958 AIMP1Q12904 312 aaKnown RBP10.63□□□□□ -0.71
FGD6-201ENST00000343958 C20orf194Q5TEA3 1177 aa10.63□□□□□ -0.71
FGD6-201ENST00000343958 ZNF428Q96B54 188 aa10.63□□□□□ -0.71
FGD6-201ENST00000343958 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
FGD6-201ENST00000343958 CREBRFQ8IUR6 639 aa10.63□□□□□ -0.71
FGD6-201ENST00000343958 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
FGD6-201ENST00000343958 FAM184AQ8NB25 1140 aa10.63□□□□□ -0.71
FGD6-201ENST00000343958 ABCC5O15440 1437 aa10.63□□□□□ -0.71
FGD6-201ENST00000343958 SF3A1Q15459 793 aaKnown RBP10.63□□□□□ -0.71
FGD6-201ENST00000343958 TWISTNBQ3B726 338 aaPredicted RBP10.62□□□□□ -0.71
FGD6-201ENST00000343958 PSME1Q06323 249 aa10.62□□□□□ -0.71
FGD6-201ENST00000343958 BRPF3Q9ULD4 1205 aa10.62□□□□□ -0.71
FGD6-201ENST00000343958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
FGD6-201ENST00000343958 IFT140Q96RY7 1462 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms