RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 LMTK3Q96Q04 1460 aa21.38■■□□□ 1.01
TUBB4B-201ENST00000340384 ZFYVE9O95405 1425 aa21.38■■□□□ 1.01
TUBB4B-201ENST00000340384 TMEM2Q9UHN6 1383 aa21.38■■□□□ 1.01
TUBB4B-201ENST00000340384 NUTM2DQ5VT03 806 aaPredicted RBP21.38■■□□□ 1.01
TUBB4B-201ENST00000340384 NEXMIFQ5QGS0 1516 aa21.38■■□□□ 1.01
TUBB4B-201ENST00000340384 THEMISQ8N1K5 641 aaPredicted RBP21.37■■□□□ 1.01
TUBB4B-201ENST00000340384 ARHGAP23Q9P227 1491 aa21.37■■□□□ 1.01
TUBB4B-201ENST00000340384 RPGRIP1LQ68CZ1 1315 aa21.37■■□□□ 1.01
TUBB4B-201ENST00000340384 LTKP29376 864 aa21.37■■□□□ 1.01
TUBB4B-201ENST00000340384 KDM2AQ9Y2K7 1162 aa21.36■■□□□ 1.01
TUBB4B-201ENST00000340384 RIMS2Q9UQ26 1411 aa21.36■■□□□ 1.01
TUBB4B-201ENST00000340384 SLIT1O75093 1534 aa21.35■■□□□ 1.01
TUBB4B-201ENST00000340384 ADGRF5Q8IZF2 1346 aa21.34■■□□□ 1.01
TUBB4B-201ENST00000340384 IFT172Q9UG01 1749 aa21.34■■□□□ 1.01
TUBB4B-201ENST00000340384 HSPA2P54652 639 aa21.33■■□□□ 1.01
TUBB4B-201ENST00000340384 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1.01
TUBB4B-201ENST00000340384 NBPF8Q3BBV2 869 aa21.33■■□□□ 1.01
TUBB4B-201ENST00000340384 PPLO60437 1756 aa21.33■■□□□ 1
TUBB4B-201ENST00000340384 NRXN1Q9ULB1 1477 aa21.3■■□□□ 1
TUBB4B-201ENST00000340384 TXNDC2Q86VQ3 553 aa21.29■■□□□ 1
TUBB4B-201ENST00000340384 MYOM2P54296 1465 aa21.29■■□□□ 1
TUBB4B-201ENST00000340384 VGFO15240 615 aaPredicted RBP21.28■■□□□ 1
TUBB4B-201ENST00000340384 PRAG1Q86YV5 1406 aa21.27■■□□□ 1
TUBB4B-201ENST00000340384 DDX10Q13206 875 aaKnown RBP21.27■■□□□ 1
TUBB4B-201ENST00000340384 STAC3Q96MF2 364 aa21.27■■□□□ 1
TUBB4B-201ENST00000340384 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
TUBB4B-201ENST00000340384 HSPA5P11021 654 aaKnown RBP21.26■□□□□ 0.99
TUBB4B-201ENST00000340384 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.26■□□□□ 0.99
TUBB4B-201ENST00000340384 NCKAP5LQ9HCH0 1330 aa21.25■□□□□ 0.99
TUBB4B-201ENST00000340384 PIK3C2GO75747 1445 aa21.25■□□□□ 0.99
TUBB4B-201ENST00000340384 POLR1AO95602 1720 aaPredicted RBP21.24■□□□□ 0.99
TUBB4B-201ENST00000340384 SCAF11Q99590 1463 aaKnown RBP21.24■□□□□ 0.99
TUBB4B-201ENST00000340384 ANKLE2Q86XL3 938 aa21.24■□□□□ 0.99
TUBB4B-201ENST00000340384 HDGFP51858 240 aaKnown RBP21.23■□□□□ 0.99
TUBB4B-201ENST00000340384 HIRIP3Q9BW71 556 aaPredicted RBP21.23■□□□□ 0.99
TUBB4B-201ENST00000340384 EID1Q9Y6B2 187 aa21.23■□□□□ 0.99
TUBB4B-201ENST00000340384 CFAP70Q5T0N1 1121 aa21.22■□□□□ 0.99
TUBB4B-201ENST00000340384 PLEKHG1Q9ULL1 1385 aa21.22■□□□□ 0.99
TUBB4B-201ENST00000340384 NRXN3Q9Y4C0 1643 aa21.21■□□□□ 0.99
TUBB4B-201ENST00000340384 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
TUBB4B-201ENST00000340384 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
TUBB4B-201ENST00000340384 C14orf93Q9H972 538 aaKnown RBP21.2■□□□□ 0.98
TUBB4B-201ENST00000340384 ADAMTS13Q76LX8 1427 aa21.19■□□□□ 0.98
TUBB4B-201ENST00000340384 MED14O60244 1454 aa21.19■□□□□ 0.98
TUBB4B-201ENST00000340384 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
TUBB4B-201ENST00000340384 STRCQ7RTU9 1775 aa21.18■□□□□ 0.98
TUBB4B-201ENST00000340384 SETBP1Q9Y6X0 1596 aa21.18■□□□□ 0.98
TUBB4B-201ENST00000340384 ANP32CO43423 234 aa21.17■□□□□ 0.98
TUBB4B-201ENST00000340384 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
TUBB4B-201ENST00000340384 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
TUBB4B-201ENST00000340384 ALKQ9UM73 1620 aa21.15■□□□□ 0.98
TUBB4B-201ENST00000340384 IQGAP1P46940 1657 aa21.15■□□□□ 0.98
TUBB4B-201ENST00000340384 TRPM1Q7Z4N2 1603 aa21.15■□□□□ 0.98
TUBB4B-201ENST00000340384 NPHP4O75161 1426 aaPredicted RBP21.15■□□□□ 0.98
TUBB4B-201ENST00000340384 TMEM132EQ6IEE7 984 aa21.14■□□□□ 0.97
TUBB4B-201ENST00000340384 SETD1AO15047 1707 aaKnown RBP21.13■□□□□ 0.97
TUBB4B-201ENST00000340384 ASXL1Q8IXJ9 1541 aa21.13■□□□□ 0.97
TUBB4B-201ENST00000340384 METP08581 1390 aa21.13■□□□□ 0.97
TUBB4B-201ENST00000340384 ADGRB1O14514 1584 aa21.12■□□□□ 0.97
TUBB4B-201ENST00000340384 CCER2I3L3R5 266 aa21.11■□□□□ 0.97
TUBB4B-201ENST00000340384 BCANQ96GW7 911 aa21.11■□□□□ 0.97
TUBB4B-201ENST00000340384 TBX22Q9Y458 520 aa21.11■□□□□ 0.97
TUBB4B-201ENST00000340384 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
TUBB4B-201ENST00000340384 GPRASP1Q5JY77 1395 aa21.11■□□□□ 0.97
TUBB4B-201ENST00000340384 USP47Q96K76 1375 aa21.1■□□□□ 0.97
TUBB4B-201ENST00000340384 KIAA1210Q9ULL0 1709 aa21.1■□□□□ 0.97
TUBB4B-201ENST00000340384 CCDC7Q96M83 1385 aa21.09■□□□□ 0.97
TUBB4B-201ENST00000340384 ROCK2O75116 1388 aaKnown RBP21.07■□□□□ 0.96
TUBB4B-201ENST00000340384 PTPRUQ92729 1446 aa21.07■□□□□ 0.96
TUBB4B-201ENST00000340384 LAMC1P11047 1609 aa21.07■□□□□ 0.96
TUBB4B-201ENST00000340384 CARD11Q9BXL7 1154 aa21.04■□□□□ 0.96
TUBB4B-201ENST00000340384 DIP2AQ14689 1571 aa21.03■□□□□ 0.96
TUBB4B-201ENST00000340384 YTHDC2Q9H6S0 1430 aaKnown RBP21.02■□□□□ 0.96
TUBB4B-201ENST00000340384 STK26Q9P289 416 aa21■□□□□ 0.95
TUBB4B-201ENST00000340384 LRPPRCP42704 1394 aaKnown RBP21■□□□□ 0.95
TUBB4B-201ENST00000340384 TRAK1Q9UPV9 953 aa21■□□□□ 0.95
TUBB4B-201ENST00000340384 ABCC11Q96J66 1382 aa20.99■□□□□ 0.95
TUBB4B-201ENST00000340384 PIK3R4Q99570 1358 aa20.99■□□□□ 0.95
TUBB4B-201ENST00000340384 AMOTL2Q9Y2J4 779 aa20.99■□□□□ 0.95
TUBB4B-201ENST00000340384 KIF7Q2M1P5 1343 aa20.98■□□□□ 0.95
TUBB4B-201ENST00000340384 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
TUBB4B-201ENST00000340384 KCNA6P17658 529 aa20.96■□□□□ 0.95
TUBB4B-201ENST00000340384 TECPR2O15040 1411 aa20.96■□□□□ 0.95
TUBB4B-201ENST00000340384 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
TUBB4B-201ENST00000340384 CHD2O14647 1828 aaKnown RBP20.96■□□□□ 0.95
TUBB4B-201ENST00000340384 ROBO2Q9HCK4 1378 aa20.95■□□□□ 0.94
TUBB4B-201ENST00000340384 C11orf95C9JLR9 678 aaPredicted RBP20.95■□□□□ 0.94
TUBB4B-201ENST00000340384 XRN1Q8IZH2 1706 aaKnown RBP20.94■□□□□ 0.94
TUBB4B-201ENST00000340384 PLEKHH1Q9ULM0 1364 aa20.94■□□□□ 0.94
TUBB4B-201ENST00000340384 WAPLQ7Z5K2 1190 aa20.93■□□□□ 0.94
TUBB4B-201ENST00000340384 STRCP1A6NGW2 1772 aa20.93■□□□□ 0.94
TUBB4B-201ENST00000340384 ZNF335Q9H4Z2 1342 aaPredicted RBP20.93■□□□□ 0.94
TUBB4B-201ENST00000340384 ST20-MTHFSA0A0A6YYL1 179 aa20.93■□□□□ 0.94
TUBB4B-201ENST00000340384 NWD1Q149M9 1564 aa20.92■□□□□ 0.94
TUBB4B-201ENST00000340384 DLC1Q96QB1 1528 aa20.91■□□□□ 0.94
TUBB4B-201ENST00000340384 SIRT1Q96EB6 747 aa20.91■□□□□ 0.94
TUBB4B-201ENST00000340384 PRAM1Q96QH2 718 aa20.91■□□□□ 0.94
TUBB4B-201ENST00000340384 ARHGEF28Q8N1W1 1705 aaKnown RBP20.91■□□□□ 0.94
TUBB4B-201ENST00000340384 CPS1P31327 1500 aa20.9■□□□□ 0.94
TUBB4B-201ENST00000340384 KNDC1Q76NI1 1749 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms