RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CHMP3Q9Y3E7 222 aa21.12■□□□□ 0.97
TRAPPC11-201ENST00000334690 KIF3AQ9Y496 699 aa21.12■□□□□ 0.97
TRAPPC11-201ENST00000334690 REC8O95072 547 aa21.11■□□□□ 0.97
TRAPPC11-201ENST00000334690 TOPBP1Q92547 1522 aa21.11■□□□□ 0.97
TRAPPC11-201ENST00000334690 TROQ12816 1431 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC11-201ENST00000334690 POLA1P09884 1462 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC11-201ENST00000334690 TAF7LQ5H9L4 462 aa21.1■□□□□ 0.97
TRAPPC11-201ENST00000334690 GNAI1P63096 354 aa21.1■□□□□ 0.97
TRAPPC11-201ENST00000334690 NOL8Q76FK4 1167 aaKnown RBP21.1■□□□□ 0.97
TRAPPC11-201ENST00000334690 DDX49Q9Y6V7 483 aaKnown RBP21.1■□□□□ 0.97
TRAPPC11-201ENST00000334690 ROCK1Q13464 1354 aa21.09■□□□□ 0.97
TRAPPC11-201ENST00000334690 TEFQ10587 303 aa21.09■□□□□ 0.97
TRAPPC11-201ENST00000334690 CCDC34Q96HJ3 373 aa21.08■□□□□ 0.97
TRAPPC11-201ENST00000334690 AFAP1Q8N556 730 aa21.08■□□□□ 0.97
TRAPPC11-201ENST00000334690 RILPL2Q969X0 211 aa21.08■□□□□ 0.96
TRAPPC11-201ENST00000334690 CHMP5Q9NZZ3 219 aa21.08■□□□□ 0.96
TRAPPC11-201ENST00000334690 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.96
TRAPPC11-201ENST00000334690 ATP6V1DQ9Y5K8 247 aa21.07■□□□□ 0.96
TRAPPC11-201ENST00000334690 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
TRAPPC11-201ENST00000334690 PPP2R1AP30153 589 aa21.07■□□□□ 0.96
TRAPPC11-201ENST00000334690 PNISRQ8TF01 805 aaKnown RBP21.07■□□□□ 0.96
TRAPPC11-201ENST00000334690 HSP90B1P14625 803 aaKnown RBP21.07■□□□□ 0.96
TRAPPC11-201ENST00000334690 CFAP70Q5T0N1 1121 aa21.06■□□□□ 0.96
TRAPPC11-201ENST00000334690 ARHGAP5Q13017 1502 aa21.06■□□□□ 0.96
TRAPPC11-201ENST00000334690 NBPF1Q3BBV0 1214 aa21.05■□□□□ 0.96
TRAPPC11-201ENST00000334690 CDCA7LQ96GN5 454 aa21.05■□□□□ 0.96
TRAPPC11-201ENST00000334690 TPM4P67936 248 aa21.05■□□□□ 0.96
TRAPPC11-201ENST00000334690 MTHFSP49914 203 aa21.05■□□□□ 0.96
TRAPPC11-201ENST00000334690 TCP11L2Q8N4U5 519 aa21.04■□□□□ 0.96
TRAPPC11-201ENST00000334690 GGNBP2Q9H3C7 697 aa21.04■□□□□ 0.96
TRAPPC11-201ENST00000334690 NAIPQ13075 1403 aa21.03■□□□□ 0.96
TRAPPC11-201ENST00000334690 C1orf141Q5JVX7 400 aa21.03■□□□□ 0.96
TRAPPC11-201ENST00000334690 CYB5RLQ6IPT4 315 aa21.03■□□□□ 0.96
TRAPPC11-201ENST00000334690 CHMP4CQ96CF2 233 aa21.03■□□□□ 0.96
TRAPPC11-201ENST00000334690 PANK1Q8TE04 598 aa21.02■□□□□ 0.96
TRAPPC11-201ENST00000334690 PLEKHH2Q8IVE3 1493 aa21.02■□□□□ 0.96
TRAPPC11-201ENST00000334690 NESP48681 1621 aa21.02■□□□□ 0.96
TRAPPC11-201ENST00000334690 PRG4Q92954 1404 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC11-201ENST00000334690 TMEM132EQ6IEE7 984 aa21.01■□□□□ 0.95
TRAPPC11-201ENST00000334690 RUFY2Q8WXA3 655 aa21.01■□□□□ 0.95
TRAPPC11-201ENST00000334690 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
TRAPPC11-201ENST00000334690 SCAPERQ9BY12 1400 aa21.01■□□□□ 0.95
TRAPPC11-201ENST00000334690 HECW1Q76N89 1606 aa21■□□□□ 0.95
TRAPPC11-201ENST00000334690 TULP1O00294 542 aaPredicted RBP21■□□□□ 0.95
TRAPPC11-201ENST00000334690 WDR97A6NE52 1622 aa21■□□□□ 0.95
TRAPPC11-201ENST00000334690 PDE3AQ14432 1141 aa21■□□□□ 0.95
TRAPPC11-201ENST00000334690 DAPK1P53355 1430 aa21■□□□□ 0.95
TRAPPC11-201ENST00000334690 DIAPH3Q9NSV4 1193 aa21■□□□□ 0.95
TRAPPC11-201ENST00000334690 LNPKQ9C0E8 428 aa20.99■□□□□ 0.95
TRAPPC11-201ENST00000334690 NEXNQ0ZGT2 675 aa20.99■□□□□ 0.95
TRAPPC11-201ENST00000334690 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
TRAPPC11-201ENST00000334690 C22orf23Q9BZE7 217 aa20.98■□□□□ 0.95
TRAPPC11-201ENST00000334690 FOXD4L5Q5VV16 416 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC11-201ENST00000334690 FOXD4L4Q8WXT5 416 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC11-201ENST00000334690 CABP2Q9NPB3 220 aa20.98■□□□□ 0.95
TRAPPC11-201ENST00000334690 FKBP5Q13451 457 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC11-201ENST00000334690 C9orf78Q9NZ63 289 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC11-201ENST00000334690 SUPT6HQ7KZ85 1726 aaKnown RBP20.96■□□□□ 0.95
TRAPPC11-201ENST00000334690 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
TRAPPC11-201ENST00000334690 INTS3Q68E01 1043 aaKnown RBP20.96■□□□□ 0.95
TRAPPC11-201ENST00000334690 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC11-201ENST00000334690 HMOX1P09601 288 aa20.95■□□□□ 0.94
TRAPPC11-201ENST00000334690 MAP3K1Q13233 1512 aa20.95■□□□□ 0.94
TRAPPC11-201ENST00000334690 SMG6Q86US8 1419 aaKnown RBP20.95■□□□□ 0.94
TRAPPC11-201ENST00000334690 SF3A1Q15459 793 aaKnown RBP20.95■□□□□ 0.94
TRAPPC11-201ENST00000334690 ISY1Q9ULR0 285 aaKnown RBP20.94■□□□□ 0.94
TRAPPC11-201ENST00000334690 NUCB2P80303 420 aa20.94■□□□□ 0.94
TRAPPC11-201ENST00000334690 EIF2S2P20042 333 aaKnown RBP20.94■□□□□ 0.94
TRAPPC11-201ENST00000334690 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
TRAPPC11-201ENST00000334690 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 AKNAQ7Z591 1439 aa20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 DDX58O95786 925 aaKnown RBP20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 NFKBIBQ15653 356 aa20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 HSP90AB4PQ58FF6 505 aa20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 TSPYL4Q9UJ04 414 aa20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 EPRSP07814 1512 aaKnown RBP20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 H3BQV1 296 aa20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 IFFO2Q5TF58 517 aa20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 FAM184AQ8NB25 1140 aa20.92■□□□□ 0.94
TRAPPC11-201ENST00000334690 ANO2Q9NQ90 1003 aa20.91■□□□□ 0.94
TRAPPC11-201ENST00000334690 RSPH6AQ9H0K4 717 aa20.91■□□□□ 0.94
TRAPPC11-201ENST00000334690 CCDC184Q52MB2 194 aa20.9■□□□□ 0.94
TRAPPC11-201ENST00000334690 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC11-201ENST00000334690 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
TRAPPC11-201ENST00000334690 IFIT2P09913 472 aaKnown RBP20.9■□□□□ 0.94
TRAPPC11-201ENST00000334690 TTC5Q8N0Z6 440 aa20.9■□□□□ 0.94
TRAPPC11-201ENST00000334690 FAM69CQ0P6D2 419 aa20.89■□□□□ 0.94
TRAPPC11-201ENST00000334690 SLC12A5Q9H2X9 1139 aa20.88■□□□□ 0.93
TRAPPC11-201ENST00000334690 ERBINQ96RT1 1412 aa20.88■□□□□ 0.93
TRAPPC11-201ENST00000334690 CDC45O75419 566 aa20.88■□□□□ 0.93
TRAPPC11-201ENST00000334690 CT47B1P0C2W7 299 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC11-201ENST00000334690 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
TRAPPC11-201ENST00000334690 TOMM22Q9NS69 142 aa20.87■□□□□ 0.93
TRAPPC11-201ENST00000334690 EXOSC9Q06265 439 aaKnown RBP20.87■□□□□ 0.93
TRAPPC11-201ENST00000334690 RNF20Q5VTR2 975 aa20.87■□□□□ 0.93
TRAPPC11-201ENST00000334690 CPLX2Q6PUV4 134 aaKnown RBP20.86■□□□□ 0.93
TRAPPC11-201ENST00000334690 NECTIN2Q92692 538 aa20.86■□□□□ 0.93
TRAPPC11-201ENST00000334690 BACH2Q9BYV9 841 aa20.86■□□□□ 0.93
TRAPPC11-201ENST00000334690 PSME1Q06323 249 aa20.86■□□□□ 0.93
TRAPPC11-201ENST00000334690 WDR63Q8IWG1 891 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms