RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KIAA1211Q6ZU35 1233 aa7.35□□□□□ -1.23
CDC42BPA-201ENST00000334218 KRI1Q8N9T8 703 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-201ENST00000334218 OSCARQ8IYS5 282 aa7.35□□□□□ -1.23
CDC42BPA-201ENST00000334218 EEA1Q15075 1411 aa7.35□□□□□ -1.23
CDC42BPA-201ENST00000334218 DNAJC21Q5F1R6 531 aaKnown RBP7.35□□□□□ -1.23
CDC42BPA-201ENST00000334218 MICALCLQ6ZW33 695 aa7.35□□□□□ -1.23
CDC42BPA-201ENST00000334218 SEPT8Q92599 483 aa7.35□□□□□ -1.23
CDC42BPA-201ENST00000334218 CCDC152Q4G0S7 254 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 USH1CQ9Y6N9 552 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 RNF20Q5VTR2 975 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 GSE1Q14687 1217 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 PLEKHD1A6NEE1 506 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 CHMP2AO43633 222 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 SP100P23497 879 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 HSP90AB4PQ58FF6 505 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 SH3BP5O60239 455 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 KCTD17Q8N5Z5 321 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 TIGD1Q96MW7 591 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 CEP89Q96ST8 783 aa7.34□□□□□ -1.23
CDC42BPA-201ENST00000334218 EIF3JO75822 258 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-201ENST00000334218 ZNF592Q92610 1267 aa7.33□□□□□ -1.24
CDC42BPA-201ENST00000334218 CT47B1P0C2W7 299 aaPredicted RBP7.33□□□□□ -1.24
CDC42BPA-201ENST00000334218 MNAT1P51948 309 aa7.33□□□□□ -1.24
CDC42BPA-201ENST00000334218 CLASRPQ8N2M8 674 aaKnown RBP7.33□□□□□ -1.24
CDC42BPA-201ENST00000334218 WRNQ14191 1432 aaPredicted RBP eCLIP7.33□□□□□ -1.24
CDC42BPA-201ENST00000334218 KIF27Q86VH2 1401 aa7.33□□□□□ -1.24
CDC42BPA-201ENST00000334218 FAM184AQ8NB25 1140 aa7.33□□□□□ -1.24
CDC42BPA-201ENST00000334218 MBD3O95983 291 aa7.32□□□□□ -1.24
CDC42BPA-201ENST00000334218 SPRYD3Q8NCJ5 442 aa7.32□□□□□ -1.24
CDC42BPA-201ENST00000334218 BTN2A1Q7KYR7 527 aa7.32□□□□□ -1.24
CDC42BPA-201ENST00000334218 PDCD7Q8N8D1 485 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-201ENST00000334218 PPM1EQ8WY54 764 aa7.32□□□□□ -1.24
CDC42BPA-201ENST00000334218 RNF8O76064 485 aa7.32□□□□□ -1.24
CDC42BPA-201ENST00000334218 PPP4R4Q6NUP7 873 aa7.32□□□□□ -1.24
CDC42BPA-201ENST00000334218 NUTM1Q86Y26 1132 aa7.32□□□□□ -1.24
CDC42BPA-201ENST00000334218 FMNL3Q8IVF7 1028 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 DDX12PQ92771 950 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 ATAD2BQ9ULI0 1458 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 CT47A1Q5JQC4 288 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 PPP4R2Q9NY27 417 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 DAAM2Q86T65 1068 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 CEP164Q9UPV0 1460 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 TPM1P09493 284 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 CCDC65Q8IXS2 484 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 CEP104O60308 925 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 IPO4Q8TEX9 1081 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 CGNQ9P2M7 1197 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 IKQ13123 557 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 HDAC5Q9UQL6 1122 aa7.31□□□□□ -1.24
CDC42BPA-201ENST00000334218 KIF3BO15066 747 aa7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 NCAPD3P42695 1498 aa7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 SLMAPQ14BN4 828 aa7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 LRRC43Q8N309 656 aa7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 MAP9Q49MG5 647 aa7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 GTPBP4Q9BZE4 634 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 CARMIL2Q6F5E8 1435 aa7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 PPM1FP49593 454 aaPredicted RBP7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 ERLIN1O75477 346 aa7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 FRMD4BQ9Y2L6 1034 aa7.3□□□□□ -1.24
CDC42BPA-201ENST00000334218 RABEP1Q15276 862 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 PPFIA3O75145 1194 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 CCDC38Q502W7 563 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 CCDC144CPQ8IYA2 1237 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 A0A1B0GUA9 196 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 PRPF38AQ8NAV1 312 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 MS4A1P11836 297 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 RBBP5Q15291 538 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 FGD1P98174 961 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 JAKMIP3Q5VZ66 844 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 TAX1BP1Q86VP1 789 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 DNAAF4Q8WXU2 420 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 KIF20AO95235 890 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 LRCH2Q5VUJ6 765 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 ERLIN2O94905 339 aa7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 APLFQ8IW19 511 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-201ENST00000334218 TSR1Q2NL82 804 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 CCAR2Q8N163 923 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 ZMYND15Q9H091 742 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 STAG3Q9UJ98 1225 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 SEPT7Q16181 437 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 CCDC6Q16204 474 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 CHMP4CQ96CF2 233 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 CFAP45Q9UL16 551 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 DBN1Q16643 649 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 RNF214Q8ND24 703 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 PSMD7P51665 324 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 TPX2Q9ULW0 747 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 PLIN1O60240 522 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 TRIM35Q9UPQ4 493 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 FANCIQ9NVI1 1328 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 ZNF280CQ8ND82 737 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 SLC26A8Q96RN1 970 aa7.28□□□□□ -1.24
CDC42BPA-201ENST00000334218 IVLP07476 585 aa7.27□□□□□ -1.24
CDC42BPA-201ENST00000334218 C10orf67Q8IYJ2 551 aa7.27□□□□□ -1.24
CDC42BPA-201ENST00000334218 MKL2Q9ULH7 1088 aa7.27□□□□□ -1.24
CDC42BPA-201ENST00000334218 ZHX1Q9UKY1 873 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-201ENST00000334218 EZRP15311 586 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-201ENST00000334218 SESN3P58005 492 aa7.27□□□□□ -1.25
CDC42BPA-201ENST00000334218 ZC4H2Q9NQZ6 224 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms