RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CFAP70Q5T0N1 1121 aa27.34■■□□□ 1.97
LINC01006-201ENST00000333319 CCDC136Q96JN2 1154 aa27.33■■□□□ 1.97
LINC01006-201ENST00000333319 PPRC1Q5VV67 1664 aaKnown RBP27.33■■□□□ 1.97
LINC01006-201ENST00000333319 ADGRF5Q8IZF2 1346 aa27.33■■□□□ 1.96
LINC01006-201ENST00000333319 SYNMO15061 1565 aa27.33■■□□□ 1.96
LINC01006-201ENST00000333319 INSRP06213 1382 aa27.32■■□□□ 1.96
LINC01006-201ENST00000333319 MAP3K4Q9Y6R4 1608 aa27.32■■□□□ 1.96
LINC01006-201ENST00000333319 CD109Q6YHK3 1445 aa27.32■■□□□ 1.96
LINC01006-201ENST00000333319 BLMP54132 1417 aaPredicted RBP27.32■■□□□ 1.96
LINC01006-201ENST00000333319 MYOM2P54296 1465 aa27.31■■□□□ 1.96
LINC01006-201ENST00000333319 AMER1Q5JTC6 1135 aaPredicted RBP27.3■■□□□ 1.96
LINC01006-201ENST00000333319 RCAN3Q9UKA8 241 aa27.3■■□□□ 1.96
LINC01006-201ENST00000333319 ZMYM4Q5VZL5 1548 aa27.3■■□□□ 1.96
LINC01006-201ENST00000333319 ABCA6Q8N139 1617 aa27.29■■□□□ 1.96
LINC01006-201ENST00000333319 LMTK2Q8IWU2 1503 aa27.29■■□□□ 1.96
LINC01006-201ENST00000333319 RRP1P56182 461 aaKnown RBP27.29■■□□□ 1.96
LINC01006-201ENST00000333319 CDCA7LQ96GN5 454 aa27.28■■□□□ 1.96
LINC01006-201ENST00000333319 FANCIQ9NVI1 1328 aa27.28■■□□□ 1.96
LINC01006-201ENST00000333319 PPP2R1AP30153 589 aa27.28■■□□□ 1.96
LINC01006-201ENST00000333319 POGZQ7Z3K3 1410 aa27.27■■□□□ 1.96
LINC01006-201ENST00000333319 MROH2AA6NES4 1674 aa27.26■■□□□ 1.96
LINC01006-201ENST00000333319 CFAP74Q9C0B2 1584 aa27.26■■□□□ 1.95
LINC01006-201ENST00000333319 MYOM1P52179 1685 aa27.26■■□□□ 1.95
LINC01006-201ENST00000333319 IFT172Q9UG01 1749 aa27.25■■□□□ 1.95
LINC01006-201ENST00000333319 ADAMTS8Q9UP79 889 aa27.25■■□□□ 1.95
LINC01006-201ENST00000333319 ASXL1Q8IXJ9 1541 aa27.24■■□□□ 1.95
LINC01006-201ENST00000333319 GGT6Q6P531 493 aa27.24■■□□□ 1.95
LINC01006-201ENST00000333319 KDM5AP29375 1690 aaKnown RBP27.23■■□□□ 1.95
LINC01006-201ENST00000333319 CHGAP10645 457 aaKnown RBP27.23■■□□□ 1.95
LINC01006-201ENST00000333319 MLH3Q9UHC1 1453 aa27.23■■□□□ 1.95
LINC01006-201ENST00000333319 MSH5O43196 834 aa27.21■■□□□ 1.95
LINC01006-201ENST00000333319 CFAP65Q6ZU64 1925 aaKnown RBP27.21■■□□□ 1.95
LINC01006-201ENST00000333319 FRMPD1Q5SYB0 1578 aa27.21■■□□□ 1.95
LINC01006-201ENST00000333319 SLC24A1O60721 1099 aa27.21■■□□□ 1.95
LINC01006-201ENST00000333319 NRXN1Q9ULB1 1477 aa27.2■■□□□ 1.94
LINC01006-201ENST00000333319 HECW2Q9P2P5 1572 aa27.19■■□□□ 1.94
LINC01006-201ENST00000333319 NOS1P29475 1434 aa27.19■■□□□ 1.94
LINC01006-201ENST00000333319 NPATQ14207 1427 aa27.19■■□□□ 1.94
LINC01006-201ENST00000333319 ERVK-7P63135 1459 aa27.19■■□□□ 1.94
LINC01006-201ENST00000333319 WDR43Q15061 677 aaKnown RBP eCLIP27.19■■□□□ 1.94
LINC01006-201ENST00000333319 ADGRB3O60242 1522 aa27.19■■□□□ 1.94
LINC01006-201ENST00000333319 EXOC6Q8TAG9 804 aa27.17■■□□□ 1.94
LINC01006-201ENST00000333319 NPC1L1Q9UHC9 1359 aa27.17■■□□□ 1.94
LINC01006-201ENST00000333319 PIK3C2GO75747 1445 aa27.14■■□□□ 1.93
LINC01006-201ENST00000333319 RAPGEF3O95398 923 aa27.11■■□□□ 1.93
LINC01006-201ENST00000333319 MYO3AQ8NEV4 1616 aa27.1■■□□□ 1.93
LINC01006-201ENST00000333319 SETBP1Q9Y6X0 1596 aa27.09■■□□□ 1.93
LINC01006-201ENST00000333319 PPLO60437 1756 aa27.09■■□□□ 1.93
LINC01006-201ENST00000333319 CENPJQ9HC77 1338 aaPredicted RBP27.09■■□□□ 1.93
LINC01006-201ENST00000333319 ABCC3O15438 1527 aa27.09■■□□□ 1.93
LINC01006-201ENST00000333319 CARD14Q9BXL6 1004 aa27.09■■□□□ 1.93
LINC01006-201ENST00000333319 SBNO2Q9Y2G9 1366 aa27.09■■□□□ 1.93
LINC01006-201ENST00000333319 NEO1Q92859 1461 aa27.08■■□□□ 1.92
LINC01006-201ENST00000333319 C14orf93Q9H972 538 aaKnown RBP27.07■■□□□ 1.92
LINC01006-201ENST00000333319 TRAK1Q9UPV9 953 aa27.07■■□□□ 1.92
LINC01006-201ENST00000333319 PLEKHH1Q9ULM0 1364 aa27.07■■□□□ 1.92
LINC01006-201ENST00000333319 PLIN1O60240 522 aa27.06■■□□□ 1.92
LINC01006-201ENST00000333319 RPGRIP1LQ68CZ1 1315 aa27.04■■□□□ 1.92
LINC01006-201ENST00000333319 TMEM132EQ6IEE7 984 aa27.03■■□□□ 1.92
LINC01006-201ENST00000333319 CAMSAP1Q5T5Y3 1602 aa27.03■■□□□ 1.92
LINC01006-201ENST00000333319 ZNF521Q96K83 1311 aa27.01■■□□□ 1.91
LINC01006-201ENST00000333319 ADGRB1O14514 1584 aa27■■□□□ 1.91
LINC01006-201ENST00000333319 SIGLEC1Q9BZZ2 1709 aa27■■□□□ 1.91
LINC01006-201ENST00000333319 DUSP27Q5VZP5 1158 aa27■■□□□ 1.91
LINC01006-201ENST00000333319 CCDC146Q8IYE0 955 aa27■■□□□ 1.91
LINC01006-201ENST00000333319 DIP2CQ9Y2E4 1556 aa26.99■■□□□ 1.91
LINC01006-201ENST00000333319 GOLGA2Q08379 1002 aa26.99■■□□□ 1.91
LINC01006-201ENST00000333319 QRICH2Q9H0J4 1663 aa26.97■■□□□ 1.91
LINC01006-201ENST00000333319 ERICH6Q7L0X2 663 aa26.97■■□□□ 1.91
LINC01006-201ENST00000333319 NUTM2DQ5VT03 806 aaPredicted RBP26.96■■□□□ 1.91
LINC01006-201ENST00000333319 ZC3H13Q5T200 1668 aaKnown RBP26.96■■□□□ 1.91
LINC01006-201ENST00000333319 CRBNQ96SW2 442 aa26.95■■□□□ 1.91
LINC01006-201ENST00000333319 SLC12A5Q9H2X9 1139 aa26.94■■□□□ 1.9
LINC01006-201ENST00000333319 PIK3C2BO00750 1634 aa26.93■■□□□ 1.9
LINC01006-201ENST00000333319 APAF1O14727 1248 aa26.93■■□□□ 1.9
LINC01006-201ENST00000333319 RICTORQ6R327 1708 aa26.93■■□□□ 1.9
LINC01006-201ENST00000333319 VGFO15240 615 aaPredicted RBP26.92■■□□□ 1.9
LINC01006-201ENST00000333319 NSD3Q9BZ95 1437 aa26.92■■□□□ 1.9
LINC01006-201ENST00000333319 SLFN5Q08AF3 891 aa26.91■■□□□ 1.9
LINC01006-201ENST00000333319 C20orf194Q5TEA3 1177 aa26.9■■□□□ 1.9
LINC01006-201ENST00000333319 YEATS2Q9ULM3 1422 aa26.89■■□□□ 1.9
LINC01006-201ENST00000333319 NEXMIFQ5QGS0 1516 aa26.89■■□□□ 1.9
LINC01006-201ENST00000333319 ARHGAP31Q2M1Z3 1444 aa26.89■■□□□ 1.89
LINC01006-201ENST00000333319 IDI1Q13907 227 aa26.88■■□□□ 1.89
LINC01006-201ENST00000333319 GLI2P10070 1586 aa26.88■■□□□ 1.89
LINC01006-201ENST00000333319 MORC1Q86VD1 984 aa26.88■■□□□ 1.89
LINC01006-201ENST00000333319 POLR3AO14802 1390 aaPredicted RBP26.87■■□□□ 1.89
LINC01006-201ENST00000333319 TCERG1O14776 1098 aaKnown RBP26.86■■□□□ 1.89
LINC01006-201ENST00000333319 TRMT2AQ8IZ69 625 aaKnown RBP26.85■■□□□ 1.89
LINC01006-201ENST00000333319 TNNT2P45379 298 aaPredicted RBP26.85■■□□□ 1.89
LINC01006-201ENST00000333319 SPINK5Q9NQ38 1064 aaPredicted RBP26.85■■□□□ 1.89
LINC01006-201ENST00000333319 EVC2Q86UK5 1308 aa26.82■■□□□ 1.88
LINC01006-201ENST00000333319 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
LINC01006-201ENST00000333319 SLC52A1Q9NWF4 448 aa26.82■■□□□ 1.88
LINC01006-201ENST00000333319 ARHGEF28Q8N1W1 1705 aaKnown RBP26.82■■□□□ 1.88
LINC01006-201ENST00000333319 ANP32AP39687 249 aaKnown RBP26.81■■□□□ 1.88
LINC01006-201ENST00000333319 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.8■■□□□ 1.88
LINC01006-201ENST00000333319 NGEFQ8N5V2 710 aa26.79■■□□□ 1.88
LINC01006-201ENST00000333319 E9PSI1 815 aa26.79■■□□□ 1.88
LINC01006-201ENST00000333319 PUS7Q96PZ0 661 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms