RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 UGGT1Q9NYU2 1555 aa13.57□□□□□ -0.24
C11orf54-201ENST00000331239 SLIT1O75093 1534 aa13.56□□□□□ -0.24
C11orf54-201ENST00000331239 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-201ENST00000331239 CEP170BQ9Y4F5 1589 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-201ENST00000331239 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-201ENST00000331239 THEMISQ8N1K5 641 aaPredicted RBP13.55□□□□□ -0.24
C11orf54-201ENST00000331239 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
C11orf54-201ENST00000331239 NEXMIFQ5QGS0 1516 aa13.54□□□□□ -0.24
C11orf54-201ENST00000331239 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
C11orf54-201ENST00000331239 MYO5BQ9ULV0 1848 aa13.54□□□□□ -0.24
C11orf54-201ENST00000331239 LAMC1P11047 1609 aa13.53□□□□□ -0.24
C11orf54-201ENST00000331239 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
C11orf54-201ENST00000331239 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
C11orf54-201ENST00000331239 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.24
C11orf54-201ENST00000331239 PRAG1Q86YV5 1406 aa13.52□□□□□ -0.24
C11orf54-201ENST00000331239 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
C11orf54-201ENST00000331239 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
C11orf54-201ENST00000331239 RALGAPBQ86X10 1494 aa13.5□□□□□ -0.25
C11orf54-201ENST00000331239 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
C11orf54-201ENST00000331239 SETBP1Q9Y6X0 1596 aa13.49□□□□□ -0.25
C11orf54-201ENST00000331239 ZNF326Q5BKZ1 582 aaKnown RBP13.49□□□□□ -0.25
C11orf54-201ENST00000331239 GPRASP1Q5JY77 1395 aa13.49□□□□□ -0.25
C11orf54-201ENST00000331239 RGL3Q3MIN7 710 aa13.49□□□□□ -0.25
C11orf54-201ENST00000331239 TRPM1Q7Z4N2 1603 aa13.48□□□□□ -0.25
C11orf54-201ENST00000331239 PIK3C2GO75747 1445 aa13.48□□□□□ -0.25
C11orf54-201ENST00000331239 CHGAP10645 457 aaKnown RBP13.48□□□□□ -0.25
C11orf54-201ENST00000331239 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
C11orf54-201ENST00000331239 DIP2AQ14689 1571 aa13.46□□□□□ -0.25
C11orf54-201ENST00000331239 PLEKHG1Q9ULL1 1385 aa13.46□□□□□ -0.25
C11orf54-201ENST00000331239 C14orf93Q9H972 538 aaKnown RBP13.45□□□□□ -0.26
C11orf54-201ENST00000331239 MED14O60244 1454 aa13.45□□□□□ -0.26
C11orf54-201ENST00000331239 CENPBP07199 599 aaPredicted RBP13.45□□□□□ -0.26
C11orf54-201ENST00000331239 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
C11orf54-201ENST00000331239 SLC24A1O60721 1099 aa13.44□□□□□ -0.26
C11orf54-201ENST00000331239 NBPF8Q3BBV2 869 aa13.43□□□□□ -0.26
C11orf54-201ENST00000331239 ANKLE2Q86XL3 938 aa13.43□□□□□ -0.26
C11orf54-201ENST00000331239 POLR1AO95602 1720 aaPredicted RBP13.42□□□□□ -0.26
C11orf54-201ENST00000331239 PIK3R4Q99570 1358 aa13.42□□□□□ -0.26
C11orf54-201ENST00000331239 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
C11orf54-201ENST00000331239 ADGRF5Q8IZF2 1346 aa13.42□□□□□ -0.26
C11orf54-201ENST00000331239 ALKQ9UM73 1620 aa13.4□□□□□ -0.26
C11orf54-201ENST00000331239 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
C11orf54-201ENST00000331239 SETD1AO15047 1707 aaKnown RBP13.4□□□□□ -0.26
C11orf54-201ENST00000331239 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
C11orf54-201ENST00000331239 NRXN3Q9Y4C0 1643 aa13.4□□□□□ -0.27
C11orf54-201ENST00000331239 ROCK2O75116 1388 aaKnown RBP13.39□□□□□ -0.27
C11orf54-201ENST00000331239 SIRT1Q96EB6 747 aa13.39□□□□□ -0.27
C11orf54-201ENST00000331239 LMTK3Q96Q04 1460 aa13.39□□□□□ -0.27
C11orf54-201ENST00000331239 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
C11orf54-201ENST00000331239 IQGAP1P46940 1657 aa13.38□□□□□ -0.27
C11orf54-201ENST00000331239 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
C11orf54-201ENST00000331239 DLC1Q96QB1 1528 aa13.37□□□□□ -0.27
C11orf54-201ENST00000331239 LTKP29376 864 aa13.37□□□□□ -0.27
C11orf54-201ENST00000331239 KNDC1Q76NI1 1749 aa13.37□□□□□ -0.27
C11orf54-201ENST00000331239 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
C11orf54-201ENST00000331239 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.27
C11orf54-201ENST00000331239 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
C11orf54-201ENST00000331239 TECPR2O15040 1411 aa13.35□□□□□ -0.27
C11orf54-201ENST00000331239 NPHP4O75161 1426 aaPredicted RBP13.35□□□□□ -0.27
C11orf54-201ENST00000331239 PLPPR3Q6T4P5 718 aa13.35□□□□□ -0.27
C11orf54-201ENST00000331239 LRPPRCP42704 1394 aaKnown RBP13.34□□□□□ -0.27
C11orf54-201ENST00000331239 ABCC11Q96J66 1382 aa13.34□□□□□ -0.27
C11orf54-201ENST00000331239 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
C11orf54-201ENST00000331239 SBNO2Q9Y2G9 1366 aa13.34□□□□□ -0.27
C11orf54-201ENST00000331239 DMRT2Q9Y5R5 561 aa13.33□□□□□ -0.28
C11orf54-201ENST00000331239 FAM135BQ49AJ0 1406 aa13.32□□□□□ -0.28
C11orf54-201ENST00000331239 USP47Q96K76 1375 aa13.32□□□□□ -0.28
C11orf54-201ENST00000331239 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
C11orf54-201ENST00000331239 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
C11orf54-201ENST00000331239 CPS1P31327 1500 aa13.31□□□□□ -0.28
C11orf54-201ENST00000331239 NBPF1Q3BBV0 1214 aa13.31□□□□□ -0.28
C11orf54-201ENST00000331239 MIER1Q8N108 512 aa13.31□□□□□ -0.28
C11orf54-201ENST00000331239 CHD2O14647 1828 aaKnown RBP13.3□□□□□ -0.28
C11orf54-201ENST00000331239 PUS7Q96PZ0 661 aaKnown RBP13.3□□□□□ -0.28
C11orf54-201ENST00000331239 PTCH1Q13635 1447 aa13.3□□□□□ -0.28
C11orf54-201ENST00000331239 STRCQ7RTU9 1775 aa13.29□□□□□ -0.28
C11orf54-201ENST00000331239 ARHGEF28Q8N1W1 1705 aaKnown RBP13.29□□□□□ -0.28
C11orf54-201ENST00000331239 NWD1Q149M9 1564 aa13.29□□□□□ -0.28
C11orf54-201ENST00000331239 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
C11orf54-201ENST00000331239 GTF3C3Q9Y5Q9 886 aa13.28□□□□□ -0.28
C11orf54-201ENST00000331239 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
C11orf54-201ENST00000331239 NCOA3Q9Y6Q9 1424 aa13.27□□□□□ -0.29
C11orf54-201ENST00000331239 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.29
C11orf54-201ENST00000331239 CDCA8Q53HL2 280 aa13.27□□□□□ -0.29
C11orf54-201ENST00000331239 BCANQ96GW7 911 aa13.27□□□□□ -0.29
C11orf54-201ENST00000331239 METP08581 1390 aa13.26□□□□□ -0.29
C11orf54-201ENST00000331239 NKTRP30414 1462 aaKnown RBP13.26□□□□□ -0.29
C11orf54-201ENST00000331239 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
C11orf54-201ENST00000331239 KCNA6P17658 529 aa13.25□□□□□ -0.29
C11orf54-201ENST00000331239 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
C11orf54-201ENST00000331239 CENPJQ9HC77 1338 aaPredicted RBP13.25□□□□□ -0.29
C11orf54-201ENST00000331239 QRICH2Q9H0J4 1663 aa13.23□□□□□ -0.29
C11orf54-201ENST00000331239 ADGRB2O60241 1585 aa13.23□□□□□ -0.29
C11orf54-201ENST00000331239 ST20-MTHFSA0A0A6YYL1 179 aa13.22□□□□□ -0.29
C11orf54-201ENST00000331239 TMEM132EQ6IEE7 984 aa13.22□□□□□ -0.29
C11orf54-201ENST00000331239 TESK2Q96S53 571 aa13.22□□□□□ -0.29
C11orf54-201ENST00000331239 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
C11orf54-201ENST00000331239 TMF1P82094 1093 aa13.21□□□□□ -0.29
C11orf54-201ENST00000331239 SLC26A8Q96RN1 970 aa13.21□□□□□ -0.29
C11orf54-201ENST00000331239 AMOTL2Q9Y2J4 779 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms