RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 C11orf95C9JLR9 678 aaPredicted RBP30.32■■■□□ 2.44
TOP1MT-201ENST00000329245 IFT172Q9UG01 1749 aa30.32■■■□□ 2.44
TOP1MT-201ENST00000329245 LAMC1P11047 1609 aa30.28■■■□□ 2.44
TOP1MT-201ENST00000329245 VGFO15240 615 aaPredicted RBP30.28■■■□□ 2.44
TOP1MT-201ENST00000329245 CFAP70Q5T0N1 1121 aa30.28■■■□□ 2.44
TOP1MT-201ENST00000329245 PPLO60437 1756 aa30.27■■■□□ 2.44
TOP1MT-201ENST00000329245 NUTM2DQ5VT03 806 aaPredicted RBP30.27■■■□□ 2.44
TOP1MT-201ENST00000329245 CCDC7Q96M83 1385 aa30.27■■■□□ 2.44
TOP1MT-201ENST00000329245 NRXN1Q9ULB1 1477 aa30.26■■■□□ 2.44
TOP1MT-201ENST00000329245 TMEM131LA2VDJ0 1609 aa30.26■■■□□ 2.43
TOP1MT-201ENST00000329245 KIF7Q2M1P5 1343 aa30.24■■■□□ 2.43
TOP1MT-201ENST00000329245 NEXMIFQ5QGS0 1516 aa30.23■■■□□ 2.43
TOP1MT-201ENST00000329245 KIAA1210Q9ULL0 1709 aa30.21■■■□□ 2.43
TOP1MT-201ENST00000329245 TNRQ92752 1358 aa30.21■■■□□ 2.43
TOP1MT-201ENST00000329245 CEBPAP49715 358 aaPredicted RBP30.21■■■□□ 2.43
TOP1MT-201ENST00000329245 PIK3C2GO75747 1445 aa30.2■■■□□ 2.43
TOP1MT-201ENST00000329245 MYO5BQ9ULV0 1848 aa30.19■■■□□ 2.42
TOP1MT-201ENST00000329245 POLR3GLQ9BT43 218 aa30.18■■■□□ 2.42
TOP1MT-201ENST00000329245 PLPPR3Q6T4P5 718 aa30.17■■■□□ 2.42
TOP1MT-201ENST00000329245 C14orf93Q9H972 538 aaKnown RBP30.17■■■□□ 2.42
TOP1MT-201ENST00000329245 SCAF11Q99590 1463 aaKnown RBP30.16■■■□□ 2.42
TOP1MT-201ENST00000329245 FER1L4A9Z1Z3 1794 aa30.16■■■□□ 2.42
TOP1MT-201ENST00000329245 A2ML1A8K2U0 1454 aa30.15■■■□□ 2.42
TOP1MT-201ENST00000329245 ZFYVE9O95405 1425 aa30.15■■■□□ 2.42
TOP1MT-201ENST00000329245 POLR1AO95602 1720 aaPredicted RBP30.13■■■□□ 2.41
TOP1MT-201ENST00000329245 EIF3AQ14152 1382 aaKnown RBP30.1■■■□□ 2.41
TOP1MT-201ENST00000329245 TESK2Q96S53 571 aa30.1■■■□□ 2.41
TOP1MT-201ENST00000329245 IQGAP1P46940 1657 aa30.1■■■□□ 2.41
TOP1MT-201ENST00000329245 SENP3Q9H4L4 574 aaPredicted RBP30.09■■■□□ 2.41
TOP1MT-201ENST00000329245 C3P01024 1663 aa30.08■■■□□ 2.41
TOP1MT-201ENST00000329245 ANP32CO43423 234 aa30.08■■■□□ 2.41
TOP1MT-201ENST00000329245 TMEM132EQ6IEE7 984 aa30.07■■■□□ 2.4
TOP1MT-201ENST00000329245 SETBP1Q9Y6X0 1596 aa30.07■■■□□ 2.4
TOP1MT-201ENST00000329245 RIMS2Q9UQ26 1411 aa30.06■■■□□ 2.4
TOP1MT-201ENST00000329245 TMF1P82094 1093 aa30.06■■■□□ 2.4
TOP1MT-201ENST00000329245 NLRP1Q9C000 1473 aa30.03■■■□□ 2.4
TOP1MT-201ENST00000329245 HDGFP51858 240 aaKnown RBP30.03■■■□□ 2.4
TOP1MT-201ENST00000329245 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.03■■■□□ 2.4
TOP1MT-201ENST00000329245 TRAK1Q9UPV9 953 aa30.02■■■□□ 2.4
TOP1MT-201ENST00000329245 ADGRB1O14514 1584 aa30■■■□□ 2.39
TOP1MT-201ENST00000329245 DISP3Q9P2K9 1392 aa30■■■□□ 2.39
TOP1MT-201ENST00000329245 RIMS1Q86UR5 1692 aaKnown RBP29.97■■■□□ 2.39
TOP1MT-201ENST00000329245 KDM5AP29375 1690 aaKnown RBP29.96■■■□□ 2.39
TOP1MT-201ENST00000329245 UBR1Q8IWV7 1749 aa29.95■■■□□ 2.39
TOP1MT-201ENST00000329245 TMEM2Q9UHN6 1383 aa29.95■■■□□ 2.38
TOP1MT-201ENST00000329245 SLC24A1O60721 1099 aa29.95■■■□□ 2.38
TOP1MT-201ENST00000329245 ADAMTSL3P82987 1691 aa29.93■■■□□ 2.38
TOP1MT-201ENST00000329245 CENPJQ9HC77 1338 aaPredicted RBP29.93■■■□□ 2.38
TOP1MT-201ENST00000329245 CDCA8Q53HL2 280 aa29.92■■■□□ 2.38
TOP1MT-201ENST00000329245 ALKQ9UM73 1620 aa29.91■■■□□ 2.38
TOP1MT-201ENST00000329245 YTHDC1Q96MU7 727 aaKnown RBP29.9■■■□□ 2.38
TOP1MT-201ENST00000329245 STK26Q9P289 416 aa29.9■■■□□ 2.38
TOP1MT-201ENST00000329245 BCANQ96GW7 911 aa29.89■■■□□ 2.38
TOP1MT-201ENST00000329245 THEMISQ8N1K5 641 aaPredicted RBP29.87■■■□□ 2.37
TOP1MT-201ENST00000329245 MYO3AQ8NEV4 1616 aa29.85■■■□□ 2.37
TOP1MT-201ENST00000329245 ASXL1Q8IXJ9 1541 aa29.85■■■□□ 2.37
TOP1MT-201ENST00000329245 EID1Q9Y6B2 187 aa29.85■■■□□ 2.37
TOP1MT-201ENST00000329245 TXNDC2Q86VQ3 553 aa29.84■■■□□ 2.37
TOP1MT-201ENST00000329245 SBNO2Q9Y2G9 1366 aa29.84■■■□□ 2.37
TOP1MT-201ENST00000329245 YTHDC2Q9H6S0 1430 aaKnown RBP29.83■■■□□ 2.37
TOP1MT-201ENST00000329245 LTKP29376 864 aa29.83■■■□□ 2.37
TOP1MT-201ENST00000329245 CCER2I3L3R5 266 aa29.82■■■□□ 2.36
TOP1MT-201ENST00000329245 PTPRMP28827 1452 aa29.79■■■□□ 2.36
TOP1MT-201ENST00000329245 PRKRIP1Q9H875 184 aaPredicted RBP29.79■■■□□ 2.36
TOP1MT-201ENST00000329245 CENPBP07199 599 aaPredicted RBP29.77■■■□□ 2.36
TOP1MT-201ENST00000329245 SAFB2Q14151 953 aaKnown RBP eCLIP29.77■■■□□ 2.36
TOP1MT-201ENST00000329245 ARHGEF28Q8N1W1 1705 aaKnown RBP29.77■■■□□ 2.36
TOP1MT-201ENST00000329245 CNGB1Q14028 1251 aaPredicted RBP29.77■■■□□ 2.36
TOP1MT-201ENST00000329245 POGKQ9P215 609 aa29.77■■■□□ 2.36
TOP1MT-201ENST00000329245 SLIT1O75093 1534 aa29.77■■■□□ 2.36
TOP1MT-201ENST00000329245 QRICH2Q9H0J4 1663 aa29.76■■■□□ 2.36
TOP1MT-201ENST00000329245 NRXN3Q9Y4C0 1643 aa29.76■■■□□ 2.36
TOP1MT-201ENST00000329245 PANK3Q9H999 370 aa29.76■■■□□ 2.35
TOP1MT-201ENST00000329245 PLEKHG1Q9ULL1 1385 aa29.76■■■□□ 2.35
TOP1MT-201ENST00000329245 ARHGAP23Q9P227 1491 aa29.75■■■□□ 2.35
TOP1MT-201ENST00000329245 PRAM1Q96QH2 718 aa29.75■■■□□ 2.35
TOP1MT-201ENST00000329245 CEP170BQ9Y4F5 1589 aaPredicted RBP29.75■■■□□ 2.35
TOP1MT-201ENST00000329245 METP08581 1390 aa29.73■■■□□ 2.35
TOP1MT-201ENST00000329245 LRPPRCP42704 1394 aaKnown RBP29.73■■■□□ 2.35
TOP1MT-201ENST00000329245 SETD1AO15047 1707 aaKnown RBP29.72■■■□□ 2.35
TOP1MT-201ENST00000329245 EVC2Q86UK5 1308 aa29.71■■■□□ 2.35
TOP1MT-201ENST00000329245 ABCC11Q96J66 1382 aa29.69■■■□□ 2.34
TOP1MT-201ENST00000329245 ADAMTS13Q76LX8 1427 aa29.68■■■□□ 2.34
TOP1MT-201ENST00000329245 PER1O15534 1290 aaPredicted RBP29.68■■■□□ 2.34
TOP1MT-201ENST00000329245 SLC26A8Q96RN1 970 aa29.66■■■□□ 2.34
TOP1MT-201ENST00000329245 SETD1BQ9UPS6 1966 aaKnown RBP29.66■■■□□ 2.34
TOP1MT-201ENST00000329245 MINK1Q8N4C8 1332 aaPredicted RBP29.65■■■□□ 2.34
TOP1MT-201ENST00000329245 WAPLQ7Z5K2 1190 aa29.64■■■□□ 2.34
TOP1MT-201ENST00000329245 DLC1Q96QB1 1528 aa29.64■■■□□ 2.33
TOP1MT-201ENST00000329245 ANKLE2Q86XL3 938 aa29.61■■■□□ 2.33
TOP1MT-201ENST00000329245 TMC1Q8TDI8 760 aa29.61■■■□□ 2.33
TOP1MT-201ENST00000329245 PUS7Q96PZ0 661 aaKnown RBP29.61■■■□□ 2.33
TOP1MT-201ENST00000329245 ZNF142P52746 1687 aaPredicted RBP29.61■■■□□ 2.33
TOP1MT-201ENST00000329245 KNSTRNQ9Y448 316 aa29.61■■■□□ 2.33
TOP1MT-201ENST00000329245 CABP2Q9NPB3 220 aa29.6■■■□□ 2.33
TOP1MT-201ENST00000329245 TBX22Q9Y458 520 aa29.6■■■□□ 2.33
TOP1MT-201ENST00000329245 TULP4Q9NRJ4 1543 aa29.6■■■□□ 2.33
TOP1MT-201ENST00000329245 SRPK2P78362 688 aaKnown RBP29.59■■■□□ 2.33
TOP1MT-201ENST00000329245 MYOM1P52179 1685 aa29.59■■■□□ 2.33
TOP1MT-201ENST00000329245 MED14O60244 1454 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms