RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 PTPRTO14522 1441 aa26.54■■□□□ 1.84
SOX2-201ENST00000325404 RRP1P56182 461 aaKnown RBP26.54■■□□□ 1.84
SOX2-201ENST00000325404 DISP3Q9P2K9 1392 aa26.54■■□□□ 1.84
SOX2-201ENST00000325404 TMF1P82094 1093 aa26.54■■□□□ 1.84
SOX2-201ENST00000325404 FRMPD1Q5SYB0 1578 aa26.53■■□□□ 1.84
SOX2-201ENST00000325404 ABCA6Q8N139 1617 aa26.53■■□□□ 1.84
SOX2-201ENST00000325404 BLMP54132 1417 aaPredicted RBP26.53■■□□□ 1.84
SOX2-201ENST00000325404 SPHKAPQ2M3C7 1700 aa26.51■■□□□ 1.83
SOX2-201ENST00000325404 RICTORQ6R327 1708 aa26.5■■□□□ 1.83
SOX2-201ENST00000325404 RCAN3Q9UKA8 241 aa26.5■■□□□ 1.83
SOX2-201ENST00000325404 LMTK2Q8IWU2 1503 aa26.48■■□□□ 1.83
SOX2-201ENST00000325404 EFCAB6Q5THR3 1501 aa26.47■■□□□ 1.83
SOX2-201ENST00000325404 DIP2CQ9Y2E4 1556 aa26.46■■□□□ 1.83
SOX2-201ENST00000325404 PANK3Q9H999 370 aa26.45■■□□□ 1.83
SOX2-201ENST00000325404 MADDQ8WXG6 1647 aa26.44■■□□□ 1.82
SOX2-201ENST00000325404 CLTCL1P53675 1640 aa26.43■■□□□ 1.82
SOX2-201ENST00000325404 IQGAP1P46940 1657 aa26.43■■□□□ 1.82
SOX2-201ENST00000325404 GGT6Q6P531 493 aa26.42■■□□□ 1.82
SOX2-201ENST00000325404 PPRC1Q5VV67 1664 aaKnown RBP26.42■■□□□ 1.82
SOX2-201ENST00000325404 CEP152O94986 1710 aa26.41■■□□□ 1.82
SOX2-201ENST00000325404 NEURL4Q96JN8 1562 aa26.4■■□□□ 1.82
SOX2-201ENST00000325404 NOP58Q9Y2X3 529 aaKnown RBP26.4■■□□□ 1.82
SOX2-201ENST00000325404 CDCA8Q53HL2 280 aa26.38■■□□□ 1.81
SOX2-201ENST00000325404 TSPOAP1O95153 1857 aa26.38■■□□□ 1.81
SOX2-201ENST00000325404 YEATS2Q9ULM3 1422 aa26.38■■□□□ 1.81
SOX2-201ENST00000325404 CC2D1BQ5T0F9 858 aaKnown RBP26.37■■□□□ 1.81
SOX2-201ENST00000325404 TCERG1O14776 1098 aaKnown RBP26.36■■□□□ 1.81
SOX2-201ENST00000325404 SCAF11Q99590 1463 aaKnown RBP26.35■■□□□ 1.81
SOX2-201ENST00000325404 ANP32AP39687 249 aaKnown RBP26.35■■□□□ 1.81
SOX2-201ENST00000325404 EXOC6Q8TAG9 804 aa26.35■■□□□ 1.81
SOX2-201ENST00000325404 SYNMO15061 1565 aa26.35■■□□□ 1.81
SOX2-201ENST00000325404 SENP3-EIF4A1A0A087X0R7 540 aa26.34■■□□□ 1.81
SOX2-201ENST00000325404 ABCC3O15438 1527 aa26.34■■□□□ 1.81
SOX2-201ENST00000325404 IPO9Q96P70 1041 aaKnown RBP26.33■■□□□ 1.81
SOX2-201ENST00000325404 KIAA1210Q9ULL0 1709 aa26.33■■□□□ 1.81
SOX2-201ENST00000325404 NPC1L1Q9UHC9 1359 aa26.32■■□□□ 1.8
SOX2-201ENST00000325404 NPATQ14207 1427 aa26.32■■□□□ 1.8
SOX2-201ENST00000325404 MS4A1P11836 297 aa26.31■■□□□ 1.8
SOX2-201ENST00000325404 UGGT1Q9NYU2 1555 aa26.3■■□□□ 1.8
SOX2-201ENST00000325404 SLC24A1O60721 1099 aa26.29■■□□□ 1.8
SOX2-201ENST00000325404 CDCA7LQ96GN5 454 aa26.29■■□□□ 1.8
SOX2-201ENST00000325404 KNSTRNQ9Y448 316 aa26.28■■□□□ 1.8
SOX2-201ENST00000325404 EIF3AQ14152 1382 aaKnown RBP26.27■■□□□ 1.8
SOX2-201ENST00000325404 KIF13AQ9H1H9 1805 aa26.26■■□□□ 1.79
SOX2-201ENST00000325404 PIK3C2GO75747 1445 aa26.26■■□□□ 1.79
SOX2-201ENST00000325404 AMER1Q5JTC6 1135 aaPredicted RBP26.26■■□□□ 1.79
SOX2-201ENST00000325404 SALL2Q9Y467 1007 aaPredicted RBP26.26■■□□□ 1.79
SOX2-201ENST00000325404 KIF1BO60333 1816 aa26.25■■□□□ 1.79
SOX2-201ENST00000325404 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
SOX2-201ENST00000325404 ASXL1Q8IXJ9 1541 aa26.25■■□□□ 1.79
SOX2-201ENST00000325404 PPP2R1AP30153 589 aa26.25■■□□□ 1.79
SOX2-201ENST00000325404 ZC3H13Q5T200 1668 aaKnown RBP26.23■■□□□ 1.79
SOX2-201ENST00000325404 ADAMTS8Q9UP79 889 aa26.22■■□□□ 1.79
SOX2-201ENST00000325404 MYOM2P54296 1465 aa26.21■■□□□ 1.79
SOX2-201ENST00000325404 ARHGAP31Q2M1Z3 1444 aa26.2■■□□□ 1.78
SOX2-201ENST00000325404 PAK3O75914 559 aaPredicted RBP26.2■■□□□ 1.78
SOX2-201ENST00000325404 BCL11AQ9H165 835 aa26.19■■□□□ 1.78
SOX2-201ENST00000325404 NOS1P29475 1434 aa26.19■■□□□ 1.78
SOX2-201ENST00000325404 ZNF521Q96K83 1311 aa26.18■■□□□ 1.78
SOX2-201ENST00000325404 ADGRB3O60242 1522 aa26.18■■□□□ 1.78
SOX2-201ENST00000325404 MYOM1P52179 1685 aa26.18■■□□□ 1.78
SOX2-201ENST00000325404 REREQ9P2R6 1566 aa26.18■■□□□ 1.78
SOX2-201ENST00000325404 ZBTB47Q9UFB7 747 aaPredicted RBP26.18■■□□□ 1.78
SOX2-201ENST00000325404 CFAP65Q6ZU64 1925 aaKnown RBP26.18■■□□□ 1.78
SOX2-201ENST00000325404 WDR43Q15061 677 aaKnown RBP eCLIP26.18■■□□□ 1.78
SOX2-201ENST00000325404 MROH2AA6NES4 1674 aa26.16■■□□□ 1.78
SOX2-201ENST00000325404 BACH2Q9BYV9 841 aa26.16■■□□□ 1.78
SOX2-201ENST00000325404 KDM5AP29375 1690 aaKnown RBP26.16■■□□□ 1.78
SOX2-201ENST00000325404 CHGAP10645 457 aaKnown RBP26.15■■□□□ 1.78
SOX2-201ENST00000325404 PDE4AP27815 886 aa26.15■■□□□ 1.78
SOX2-201ENST00000325404 AGLP35573 1532 aa26.14■■□□□ 1.78
SOX2-201ENST00000325404 SIGLEC1Q9BZZ2 1709 aa26.13■■□□□ 1.77
SOX2-201ENST00000325404 IFT172Q9UG01 1749 aa26.13■■□□□ 1.77
SOX2-201ENST00000325404 DUSP27Q5VZP5 1158 aa26.12■■□□□ 1.77
SOX2-201ENST00000325404 CRBNQ96SW2 442 aa26.12■■□□□ 1.77
SOX2-201ENST00000325404 PLEKHH1Q9ULM0 1364 aa26.12■■□□□ 1.77
SOX2-201ENST00000325404 NGEFQ8N5V2 710 aa26.11■■□□□ 1.77
SOX2-201ENST00000325404 ADGRF5Q8IZF2 1346 aa26.1■■□□□ 1.77
SOX2-201ENST00000325404 GOLGA2Q08379 1002 aa26.1■■□□□ 1.77
SOX2-201ENST00000325404 NRXN1Q9ULB1 1477 aa26.09■■□□□ 1.77
SOX2-201ENST00000325404 PLIN1O60240 522 aa26.09■■□□□ 1.77
SOX2-201ENST00000325404 PIK3C2BO00750 1634 aa26.09■■□□□ 1.77
SOX2-201ENST00000325404 SBNO2Q9Y2G9 1366 aa26.08■■□□□ 1.77
SOX2-201ENST00000325404 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
SOX2-201ENST00000325404 ARHGEF40Q8TER5 1519 aa26.08■■□□□ 1.77
SOX2-201ENST00000325404 PPP6R1Q9UPN7 881 aa26.08■■□□□ 1.76
SOX2-201ENST00000325404 RPGRIP1LQ68CZ1 1315 aa26.07■■□□□ 1.76
SOX2-201ENST00000325404 TRMT2AQ8IZ69 625 aaKnown RBP26.07■■□□□ 1.76
SOX2-201ENST00000325404 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.07■■□□□ 1.76
SOX2-201ENST00000325404 MYO3AQ8NEV4 1616 aa26.07■■□□□ 1.76
SOX2-201ENST00000325404 ERVK-7P63135 1459 aa26.06■■□□□ 1.76
SOX2-201ENST00000325404 SLFN5Q08AF3 891 aa26.05■■□□□ 1.76
SOX2-201ENST00000325404 CFAP70Q5T0N1 1121 aa26.05■■□□□ 1.76
SOX2-201ENST00000325404 KDM2BQ8NHM5 1336 aa26.04■■□□□ 1.76
SOX2-201ENST00000325404 SLC52A1Q9NWF4 448 aa26.04■■□□□ 1.76
SOX2-201ENST00000325404 PPLO60437 1756 aa26.02■■□□□ 1.76
SOX2-201ENST00000325404 PREX1Q8TCU6 1659 aa26.02■■□□□ 1.76
SOX2-201ENST00000325404 DEKP35659 375 aaKnown RBP26.02■■□□□ 1.76
SOX2-201ENST00000325404 CENPQQ7L2Z9 268 aaPredicted RBP26.02■■□□□ 1.76
SOX2-201ENST00000325404 SETBP1Q9Y6X0 1596 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms