RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 RNF17Q9BXT8 1623 aaKnown RBP10.03□□□□□ -0.8
CD46-201ENST00000322875 MCM4P33991 863 aa10.03□□□□□ -0.8
CD46-201ENST00000322875 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
CD46-201ENST00000322875 ERBB4Q15303 1308 aa10.03□□□□□ -0.8
CD46-201ENST00000322875 DISP1Q96F81 1524 aa10.03□□□□□ -0.8
CD46-201ENST00000322875 GRIN2AQ12879 1464 aa10.03□□□□□ -0.8
CD46-201ENST00000322875 GOLGA2Q08379 1002 aa10.02□□□□□ -0.8
CD46-201ENST00000322875 WDR7Q9Y4E6 1490 aa10.02□□□□□ -0.81
CD46-201ENST00000322875 NUP160Q12769 1436 aa10.02□□□□□ -0.81
CD46-201ENST00000322875 TROQ12816 1431 aaPredicted RBP10.02□□□□□ -0.81
CD46-201ENST00000322875 MRE11P49959 708 aa10.02□□□□□ -0.81
CD46-201ENST00000322875 SLKQ9H2G2 1235 aaPredicted RBP10.02□□□□□ -0.81
CD46-201ENST00000322875 MAGI2Q86UL8 1455 aa10.02□□□□□ -0.81
CD46-201ENST00000322875 ERBINQ96RT1 1412 aa10.01□□□□□ -0.81
CD46-201ENST00000322875 NINLQ9Y2I6 1382 aa10.01□□□□□ -0.81
CD46-201ENST00000322875 MYO5CQ9NQX4 1742 aa10.01□□□□□ -0.81
CD46-201ENST00000322875 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
CD46-201ENST00000322875 CC2D1BQ5T0F9 858 aaKnown RBP10.01□□□□□ -0.81
CD46-201ENST00000322875 SHROOM2Q13796 1616 aa10.01□□□□□ -0.81
CD46-201ENST00000322875 EIF2AK4Q9P2K8 1649 aaKnown RBP10.01□□□□□ -0.81
CD46-201ENST00000322875 FBLN2P98095 1184 aa10.01□□□□□ -0.81
CD46-201ENST00000322875 PANK3Q9H999 370 aa10.01□□□□□ -0.81
CD46-201ENST00000322875 PIK3C2GO75747 1445 aa10□□□□□ -0.81
CD46-201ENST00000322875 NUP155O75694 1391 aa10□□□□□ -0.81
CD46-201ENST00000322875 ESPNB1AK53 854 aa10□□□□□ -0.81
CD46-201ENST00000322875 NCOA3Q9Y6Q9 1424 aa10□□□□□ -0.81
CD46-201ENST00000322875 A2MP01023 1474 aa9.99□□□□□ -0.81
CD46-201ENST00000322875 PDE3AQ14432 1141 aa9.99□□□□□ -0.81
CD46-201ENST00000322875 SPINK5Q9NQ38 1064 aaPredicted RBP9.99□□□□□ -0.81
CD46-201ENST00000322875 TPM2P07951 284 aa9.99□□□□□ -0.81
CD46-201ENST00000322875 DDIT3P35638 169 aa9.99□□□□□ -0.81
CD46-201ENST00000322875 ZNF692Q9BU19 519 aaPredicted RBP9.99□□□□□ -0.81
CD46-201ENST00000322875 PDCL3Q9H2J4 239 aa9.99□□□□□ -0.81
CD46-201ENST00000322875 CGNL1Q0VF96 1302 aa9.99□□□□□ -0.81
CD46-201ENST00000322875 PRG4Q92954 1404 aaPredicted RBP9.99□□□□□ -0.81
CD46-201ENST00000322875 PPP2R1AP30153 589 aa9.99□□□□□ -0.81
CD46-201ENST00000322875 SYNMO15061 1565 aa9.98□□□□□ -0.81
CD46-201ENST00000322875 SCAPERQ9BY12 1400 aa9.98□□□□□ -0.81
CD46-201ENST00000322875 CCDC141Q6ZP82 1450 aa9.98□□□□□ -0.81
CD46-201ENST00000322875 MYOM1P52179 1685 aa9.98□□□□□ -0.81
CD46-201ENST00000322875 FAM135AQ9P2D6 1515 aa9.98□□□□□ -0.81
CD46-201ENST00000322875 TRAK2O60296 914 aa9.98□□□□□ -0.81
CD46-201ENST00000322875 GRPEL1Q9HAV7 217 aa9.98□□□□□ -0.81
CD46-201ENST00000322875 KDM2AQ9Y2K7 1162 aa9.98□□□□□ -0.81
CD46-201ENST00000322875 PLA2R1Q13018 1463 aa9.97□□□□□ -0.81
CD46-201ENST00000322875 BCAR3O75815 825 aa9.97□□□□□ -0.81
CD46-201ENST00000322875 NBPF1Q3BBV0 1214 aa9.97□□□□□ -0.81
CD46-201ENST00000322875 IQGAP1P46940 1657 aa9.97□□□□□ -0.81
CD46-201ENST00000322875 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
CD46-201ENST00000322875 PRDM4Q9UKN5 801 aa9.97□□□□□ -0.81
CD46-201ENST00000322875 C9orf84Q5VXU9 1444 aa9.97□□□□□ -0.81
CD46-201ENST00000322875 NPC1L1Q9UHC9 1359 aa9.96□□□□□ -0.81
CD46-201ENST00000322875 CALD1Q05682 793 aaKnown RBP9.96□□□□□ -0.81
CD46-201ENST00000322875 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.81
CD46-201ENST00000322875 ARHGEF5Q12774 1597 aa9.96□□□□□ -0.81
CD46-201ENST00000322875 CFDP1Q9UEE9 299 aaPredicted RBP9.96□□□□□ -0.82
CD46-201ENST00000322875 CHMP5Q9NZZ3 219 aa9.95□□□□□ -0.82
CD46-201ENST00000322875 UNC13BO14795 1591 aa9.95□□□□□ -0.82
CD46-201ENST00000322875 AAMPQ13685 434 aa9.95□□□□□ -0.82
CD46-201ENST00000322875 MYH16Q9H6N6 1097 aa9.95□□□□□ -0.82
CD46-201ENST00000322875 ASXL1Q8IXJ9 1541 aa9.95□□□□□ -0.82
CD46-201ENST00000322875 E9PSI1 815 aa9.94□□□□□ -0.82
CD46-201ENST00000322875 TERF1P54274 439 aa9.94□□□□□ -0.82
CD46-201ENST00000322875 ARID3CA6NKF2 412 aa9.93□□□□□ -0.82
CD46-201ENST00000322875 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
CD46-201ENST00000322875 ATP10AO60312 1499 aa9.93□□□□□ -0.82
CD46-201ENST00000322875 WDR43Q15061 677 aaKnown RBP eCLIP9.93□□□□□ -0.82
CD46-201ENST00000322875 CYB5RLQ6IPT4 315 aa9.93□□□□□ -0.82
CD46-201ENST00000322875 NGEFQ8N5V2 710 aa9.93□□□□□ -0.82
CD46-201ENST00000322875 DDX11L8A8MPP1 907 aa9.92□□□□□ -0.82
CD46-201ENST00000322875 TMF1P82094 1093 aa9.92□□□□□ -0.82
CD46-201ENST00000322875 GAS2L3Q86XJ1 694 aa9.92□□□□□ -0.82
CD46-201ENST00000322875 DMRT2Q9Y5R5 561 aa9.92□□□□□ -0.82
CD46-201ENST00000322875 PPP1R9BQ96SB3 815 aa9.92□□□□□ -0.82
CD46-201ENST00000322875 ARHGAP31Q2M1Z3 1444 aa9.92□□□□□ -0.82
CD46-201ENST00000322875 UPF2Q9HAU5 1272 aaKnown RBP9.92□□□□□ -0.82
CD46-201ENST00000322875 PMFBP1Q8TBY8 1022 aa9.91□□□□□ -0.82
CD46-201ENST00000322875 IQGAP3Q86VI3 1631 aa9.91□□□□□ -0.82
CD46-201ENST00000322875 PCDHB15Q9Y5E8 787 aa9.91□□□□□ -0.82
CD46-201ENST00000322875 SHPRHQ149N8 1683 aa9.9□□□□□ -0.82
CD46-201ENST00000322875 OFD1O75665 1012 aa9.9□□□□□ -0.82
CD46-201ENST00000322875 RIPK4P57078 832 aa9.9□□□□□ -0.82
CD46-201ENST00000322875 ARXQ96QS3 562 aa9.9□□□□□ -0.82
CD46-201ENST00000322875 MADDQ8WXG6 1647 aa9.9□□□□□ -0.82
CD46-201ENST00000322875 PANK1Q8TE04 598 aa9.9□□□□□ -0.83
CD46-201ENST00000322875 PDZRN3Q9UPQ7 1066 aa9.9□□□□□ -0.83
CD46-201ENST00000322875 COG6Q9Y2V7 657 aa9.89□□□□□ -0.83
CD46-201ENST00000322875 APAF1O14727 1248 aa9.88□□□□□ -0.83
CD46-201ENST00000322875 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
CD46-201ENST00000322875 PODXL2Q9NZ53 605 aa9.88□□□□□ -0.83
CD46-201ENST00000322875 IBTKQ9P2D0 1353 aaPredicted RBP9.88□□□□□ -0.83
CD46-201ENST00000322875 IQSEC2Q5JU85 1478 aa9.88□□□□□ -0.83
CD46-201ENST00000322875 CEP152O94986 1710 aa9.88□□□□□ -0.83
CD46-201ENST00000322875 MAST1Q9Y2H9 1570 aa9.88□□□□□ -0.83
CD46-201ENST00000322875 SNX21Q969T3 373 aa9.88□□□□□ -0.83
CD46-201ENST00000322875 C22orf23Q9BZE7 217 aa9.88□□□□□ -0.83
CD46-201ENST00000322875 ABCA8O94911 1581 aa9.87□□□□□ -0.83
CD46-201ENST00000322875 SMC5Q8IY18 1101 aa9.87□□□□□ -0.83
CD46-201ENST00000322875 PHF23Q9BUL5 403 aaPredicted RBP9.87□□□□□ -0.83
CD46-201ENST00000322875 CCDC173Q0VFZ6 552 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms