RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CAMSAP2Q08AD1 1489 aa20.65■□□□□ 0.9
SFXN1-201ENST00000321442 KIAA1107Q9UPP5 1409 aa20.64■□□□□ 0.9
SFXN1-201ENST00000321442 NUP153P49790 1475 aaKnown RBP20.63■□□□□ 0.89
SFXN1-201ENST00000321442 ATP10BO94823 1461 aa20.63■□□□□ 0.89
SFXN1-201ENST00000321442 PTPN23Q9H3S7 1636 aa20.63■□□□□ 0.89
SFXN1-201ENST00000321442 ELL2O00472 640 aaPredicted RBP20.63■□□□□ 0.89
SFXN1-201ENST00000321442 IPO8O15397 1037 aaKnown RBP20.63■□□□□ 0.89
SFXN1-201ENST00000321442 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
SFXN1-201ENST00000321442 EIF3AQ14152 1382 aaKnown RBP20.63■□□□□ 0.89
SFXN1-201ENST00000321442 PANK1Q8TE04 598 aa20.62■□□□□ 0.89
SFXN1-201ENST00000321442 NCOA1Q15788 1441 aa20.62■□□□□ 0.89
SFXN1-201ENST00000321442 RSPH6AQ9H0K4 717 aa20.62■□□□□ 0.89
SFXN1-201ENST00000321442 E9PSI1 815 aa20.61■□□□□ 0.89
SFXN1-201ENST00000321442 SLC12A5Q9H2X9 1139 aa20.61■□□□□ 0.89
SFXN1-201ENST00000321442 TERF2IPQ9NYB0 399 aa20.61■□□□□ 0.89
SFXN1-201ENST00000321442 CGNL1Q0VF96 1302 aa20.61■□□□□ 0.89
SFXN1-201ENST00000321442 FBXO31Q5XUX0 539 aaPredicted RBP20.61■□□□□ 0.89
SFXN1-201ENST00000321442 NUTM2GQ5VZR2 741 aa20.6■□□□□ 0.89
SFXN1-201ENST00000321442 CHMP4BQ9H444 224 aaKnown RBP20.6■□□□□ 0.89
SFXN1-201ENST00000321442 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
SFXN1-201ENST00000321442 SLC26A8Q96RN1 970 aa20.59■□□□□ 0.89
SFXN1-201ENST00000321442 HSP90AA2PQ14568 343 aaPredicted RBP20.58■□□□□ 0.88
SFXN1-201ENST00000321442 VSIG10Q8N0Z9 540 aa20.58■□□□□ 0.88
SFXN1-201ENST00000321442 SMG6Q86US8 1419 aaKnown RBP20.57■□□□□ 0.88
SFXN1-201ENST00000321442 GPATCH8Q9UKJ3 1502 aaKnown RBP20.57■□□□□ 0.88
SFXN1-201ENST00000321442 CD109Q6YHK3 1445 aa20.57■□□□□ 0.88
SFXN1-201ENST00000321442 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-201ENST00000321442 TXNDC2Q86VQ3 553 aa20.56■□□□□ 0.88
SFXN1-201ENST00000321442 ANKRD30BQ9BXX2 1392 aa20.56■□□□□ 0.88
SFXN1-201ENST00000321442 PLEKHH2Q8IVE3 1493 aa20.56■□□□□ 0.88
SFXN1-201ENST00000321442 FOXD4L5Q5VV16 416 aaPredicted RBP20.55■□□□□ 0.88
SFXN1-201ENST00000321442 FOXD4L4Q8WXT5 416 aaPredicted RBP20.55■□□□□ 0.88
SFXN1-201ENST00000321442 EVC2Q86UK5 1308 aa20.54■□□□□ 0.88
SFXN1-201ENST00000321442 RBM33Q96EV2 1170 aaKnown RBP20.54■□□□□ 0.88
SFXN1-201ENST00000321442 EIF4G3O43432 1585 aaKnown RBP20.53■□□□□ 0.88
SFXN1-201ENST00000321442 PRAM1Q96QH2 718 aa20.53■□□□□ 0.88
SFXN1-201ENST00000321442 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
SFXN1-201ENST00000321442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.53■□□□□ 0.88
SFXN1-201ENST00000321442 BCAR3O75815 825 aa20.52■□□□□ 0.88
SFXN1-201ENST00000321442 NOL8Q76FK4 1167 aaKnown RBP20.52■□□□□ 0.88
SFXN1-201ENST00000321442 CCDC141Q6ZP82 1450 aa20.51■□□□□ 0.87
SFXN1-201ENST00000321442 TAOK2Q9UL54 1235 aa20.51■□□□□ 0.87
SFXN1-201ENST00000321442 DDX49Q9Y6V7 483 aaKnown RBP20.51■□□□□ 0.87
SFXN1-201ENST00000321442 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
SFXN1-201ENST00000321442 ZKSCAN2Q63HK3 967 aa20.5■□□□□ 0.87
SFXN1-201ENST00000321442 C20orf194Q5TEA3 1177 aa20.49■□□□□ 0.87
SFXN1-201ENST00000321442 ADAMTS12P58397 1594 aa20.49■□□□□ 0.87
SFXN1-201ENST00000321442 AMPHP49418 695 aa20.48■□□□□ 0.87
SFXN1-201ENST00000321442 MAP3K1Q13233 1512 aa20.48■□□□□ 0.87
SFXN1-201ENST00000321442 HMOX1P09601 288 aa20.47■□□□□ 0.87
SFXN1-201ENST00000321442 ADGRL1O94910 1474 aa20.47■□□□□ 0.87
SFXN1-201ENST00000321442 CSB-PGBD3P0DP91 1061 aa20.47■□□□□ 0.87
SFXN1-201ENST00000321442 ROCK1Q13464 1354 aa20.47■□□□□ 0.87
SFXN1-201ENST00000321442 FOXD4L6Q3SYB3 417 aaPredicted RBP20.47■□□□□ 0.87
SFXN1-201ENST00000321442 FOXD4L3Q6VB84 417 aaPredicted RBP20.47■□□□□ 0.87
SFXN1-201ENST00000321442 KCNJ4P48050 445 aa20.47■□□□□ 0.87
SFXN1-201ENST00000321442 ADGRF5Q8IZF2 1346 aa20.46■□□□□ 0.87
SFXN1-201ENST00000321442 DDX11L8A8MPP1 907 aa20.46■□□□□ 0.87
SFXN1-201ENST00000321442 CHMP5Q9NZZ3 219 aa20.46■□□□□ 0.87
SFXN1-201ENST00000321442 OS9Q13438 667 aaPredicted RBP20.45■□□□□ 0.86
SFXN1-201ENST00000321442 IDI1Q13907 227 aa20.45■□□□□ 0.86
SFXN1-201ENST00000321442 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
SFXN1-201ENST00000321442 DISP1Q96F81 1524 aa20.45■□□□□ 0.86
SFXN1-201ENST00000321442 LNPKQ9C0E8 428 aa20.45■□□□□ 0.86
SFXN1-201ENST00000321442 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
SFXN1-201ENST00000321442 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
SFXN1-201ENST00000321442 MTHFSP49914 203 aa20.44■□□□□ 0.86
SFXN1-201ENST00000321442 WAPLQ7Z5K2 1190 aa20.44■□□□□ 0.86
SFXN1-201ENST00000321442 C22orf23Q9BZE7 217 aa20.43■□□□□ 0.86
SFXN1-201ENST00000321442 DZIP1LQ8IYY4 767 aaKnown RBP20.43■□□□□ 0.86
SFXN1-201ENST00000321442 KIF14Q15058 1648 aa20.43■□□□□ 0.86
SFXN1-201ENST00000321442 RAPGEF6Q8TEU7 1601 aa20.43■□□□□ 0.86
SFXN1-201ENST00000321442 ZNF330Q9Y3S2 320 aaPredicted RBP20.42■□□□□ 0.86
SFXN1-201ENST00000321442 PRKCSHP14314 528 aaPredicted RBP20.42■□□□□ 0.86
SFXN1-201ENST00000321442 FANCAO15360 1455 aa20.42■□□□□ 0.86
SFXN1-201ENST00000321442 ERBINQ96RT1 1412 aa20.42■□□□□ 0.86
SFXN1-201ENST00000321442 GOLGA6L4A6NEF3 574 aa20.41■□□□□ 0.86
SFXN1-201ENST00000321442 COG3Q96JB2 828 aa20.41■□□□□ 0.86
SFXN1-201ENST00000321442 SLC4A10Q6U841 1118 aa20.4■□□□□ 0.86
SFXN1-201ENST00000321442 CABP1Q9NZU7 370 aa20.4■□□□□ 0.86
SFXN1-201ENST00000321442 MCCP23508 829 aa20.4■□□□□ 0.86
SFXN1-201ENST00000321442 CTTNBP2Q8WZ74 1663 aa20.4■□□□□ 0.86
SFXN1-201ENST00000321442 UGGT2Q9NYU1 1516 aa20.39■□□□□ 0.85
SFXN1-201ENST00000321442 TRAPPC8Q9Y2L5 1435 aa20.39■□□□□ 0.85
SFXN1-201ENST00000321442 ZRSR1Q15695 479 aaKnown RBP20.39■□□□□ 0.85
SFXN1-201ENST00000321442 KIAA0556O60303 1618 aa20.39■□□□□ 0.85
SFXN1-201ENST00000321442 ASXL2Q76L83 1435 aa20.38■□□□□ 0.85
SFXN1-201ENST00000321442 PTMSP20962 102 aa20.38■□□□□ 0.85
SFXN1-201ENST00000321442 WDR62O43379 1518 aa20.38■□□□□ 0.85
SFXN1-201ENST00000321442 FGD1P98174 961 aa20.38■□□□□ 0.85
SFXN1-201ENST00000321442 KIAA2012Q0VF49 1180 aa20.38■□□□□ 0.85
SFXN1-201ENST00000321442 PDZRN3Q9UPQ7 1066 aa20.38■□□□□ 0.85
SFXN1-201ENST00000321442 TCP11L2Q8N4U5 519 aa20.37■□□□□ 0.85
SFXN1-201ENST00000321442 NECTIN2Q92692 538 aa20.37■□□□□ 0.85
SFXN1-201ENST00000321442 TRIM6-TRIM34B2RNG4 842 aa20.36■□□□□ 0.85
SFXN1-201ENST00000321442 TRAK2O60296 914 aa20.36■□□□□ 0.85
SFXN1-201ENST00000321442 CHAF1AQ13111 956 aaPredicted RBP20.36■□□□□ 0.85
SFXN1-201ENST00000321442 DRC7Q8IY82 874 aa20.36■□□□□ 0.85
SFXN1-201ENST00000321442 NAP1L2Q9ULW6 460 aaPredicted RBP20.36■□□□□ 0.85
SFXN1-201ENST00000321442 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms