RNA–Protein interactions for RNA: ENST00000320159.2

ZNF48-201, Transcript of zinc finger protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF48, Length 3,234 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48-201ENST00000320159 GOLGA2Q08379 1002 aa27.15■■□□□ 1.94
ZNF48-201ENST00000320159 BCL2L13Q9BXK5 485 aa27.15■■□□□ 1.94
ZNF48-201ENST00000320159 RTL5Q5HYW3 569 aaPredicted RBP27.14■■□□□ 1.94
ZNF48-201ENST00000320159 BACH2Q9BYV9 841 aa27.14■■□□□ 1.94
ZNF48-201ENST00000320159 PRDM15P57071 1507 aaPredicted RBP27.14■■□□□ 1.93
ZNF48-201ENST00000320159 SLC12A5Q9H2X9 1139 aa27.13■■□□□ 1.93
ZNF48-201ENST00000320159 DUOX2Q9NRD8 1548 aa27.13■■□□□ 1.93
ZNF48-201ENST00000320159 WDR7Q9Y4E6 1490 aa27.13■■□□□ 1.93
ZNF48-201ENST00000320159 TCERG1O14776 1098 aaKnown RBP27.12■■□□□ 1.93
ZNF48-201ENST00000320159 FRAT1Q92837 279 aaPredicted RBP27.12■■□□□ 1.93
ZNF48-201ENST00000320159 UNC13BO14795 1591 aa27.09■■□□□ 1.93
ZNF48-201ENST00000320159 ATP10AO60312 1499 aa27.09■■□□□ 1.93
ZNF48-201ENST00000320159 MAST1Q9Y2H9 1570 aa27.07■■□□□ 1.92
ZNF48-201ENST00000320159 NEFMP07197 916 aa27.07■■□□□ 1.92
ZNF48-201ENST00000320159 IQGAP3Q86VI3 1631 aa27.06■■□□□ 1.92
ZNF48-201ENST00000320159 CANXP27824 592 aaKnown RBP27.05■■□□□ 1.92
ZNF48-201ENST00000320159 STK26Q9P289 416 aa27.05■■□□□ 1.92
ZNF48-201ENST00000320159 ZCCHC11Q5TAX3 1644 aaKnown RBP27.05■■□□□ 1.92
ZNF48-201ENST00000320159 TNNQ9UQP3 1299 aa27.05■■□□□ 1.92
ZNF48-201ENST00000320159 BLMP54132 1417 aaPredicted RBP27.05■■□□□ 1.92
ZNF48-201ENST00000320159 PANK1Q8TE04 598 aa27.05■■□□□ 1.92
ZNF48-201ENST00000320159 CLUAP1Q96AJ1 413 aa27.03■■□□□ 1.92
ZNF48-201ENST00000320159 RTN4Q9NQC3 1192 aaKnown RBP27.03■■□□□ 1.92
ZNF48-201ENST00000320159 WASHC2CQ9Y4E1 1318 aa27.02■■□□□ 1.92
ZNF48-201ENST00000320159 COG6Q9Y2V7 657 aa27.01■■□□□ 1.92
ZNF48-201ENST00000320159 KANK1Q14678 1352 aa27.01■■□□□ 1.91
ZNF48-201ENST00000320159 SLFN5Q08AF3 891 aa27■■□□□ 1.91
ZNF48-201ENST00000320159 CDCA8Q53HL2 280 aa27■■□□□ 1.91
ZNF48-201ENST00000320159 FANCAO15360 1455 aa26.99■■□□□ 1.91
ZNF48-201ENST00000320159 MORC1Q86VD1 984 aa26.99■■□□□ 1.91
ZNF48-201ENST00000320159 SCAF11Q99590 1463 aaKnown RBP26.98■■□□□ 1.91
ZNF48-201ENST00000320159 RAPGEF3O95398 923 aa26.98■■□□□ 1.91
ZNF48-201ENST00000320159 ABCC1P33527 1531 aa26.98■■□□□ 1.91
ZNF48-201ENST00000320159 CLTCL1P53675 1640 aa26.97■■□□□ 1.91
ZNF48-201ENST00000320159 PLXNC1O60486 1568 aa26.95■■□□□ 1.9
ZNF48-201ENST00000320159 ZMYM4Q5VZL5 1548 aa26.94■■□□□ 1.9
ZNF48-201ENST00000320159 IGHDP01880 384 aa26.94■■□□□ 1.9
ZNF48-201ENST00000320159 CABP2Q9NPB3 220 aa26.93■■□□□ 1.9
ZNF48-201ENST00000320159 ADGRL1O94910 1474 aa26.93■■□□□ 1.9
ZNF48-201ENST00000320159 MADDQ8WXG6 1647 aa26.93■■□□□ 1.9
ZNF48-201ENST00000320159 NOS1P29475 1434 aa26.92■■□□□ 1.9
ZNF48-201ENST00000320159 EIF2AK4Q9P2K8 1649 aaKnown RBP26.9■■□□□ 1.9
ZNF48-201ENST00000320159 ZNF521Q96K83 1311 aa26.9■■□□□ 1.9
ZNF48-201ENST00000320159 MTHFSP49914 203 aa26.89■■□□□ 1.9
ZNF48-201ENST00000320159 CENPJQ9HC77 1338 aaPredicted RBP26.89■■□□□ 1.9
ZNF48-201ENST00000320159 FBLN1P23142 703 aa26.88■■□□□ 1.89
ZNF48-201ENST00000320159 DAXXQ9UER7 740 aaPredicted RBP26.88■■□□□ 1.89
ZNF48-201ENST00000320159 ZFYVE16Q7Z3T8 1539 aa26.88■■□□□ 1.89
ZNF48-201ENST00000320159 ASXL1Q8IXJ9 1541 aa26.88■■□□□ 1.89
ZNF48-201ENST00000320159 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
ZNF48-201ENST00000320159 KDM2BQ8NHM5 1336 aa26.87■■□□□ 1.89
ZNF48-201ENST00000320159 EIF3AQ14152 1382 aaKnown RBP26.86■■□□□ 1.89
ZNF48-201ENST00000320159 WWC1Q8IX03 1113 aa26.86■■□□□ 1.89
ZNF48-201ENST00000320159 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.86■■□□□ 1.89
ZNF48-201ENST00000320159 TCP11L2Q8N4U5 519 aa26.85■■□□□ 1.89
ZNF48-201ENST00000320159 NSD3Q9BZ95 1437 aa26.85■■□□□ 1.89
ZNF48-201ENST00000320159 NPM1P06748 294 aaKnown RBP eCLIP26.85■■□□□ 1.89
ZNF48-201ENST00000320159 MS4A1P11836 297 aa26.84■■□□□ 1.89
ZNF48-201ENST00000320159 U2SURPO15042 1029 aaKnown RBP26.84■■□□□ 1.89
ZNF48-201ENST00000320159 ERVK-7P63135 1459 aa26.84■■□□□ 1.89
ZNF48-201ENST00000320159 CENPQQ7L2Z9 268 aaPredicted RBP26.84■■□□□ 1.89
ZNF48-201ENST00000320159 U2AF1L5P0DN76 240 aaPredicted RBP26.83■■□□□ 1.89
ZNF48-201ENST00000320159 U2AF1Q01081 240 aaKnown RBP eCLIP26.83■■□□□ 1.89
ZNF48-201ENST00000320159 IL27Q8NEV9 243 aa26.82■■□□□ 1.88
ZNF48-201ENST00000320159 ATP7AQ04656 1500 aa26.82■■□□□ 1.88
ZNF48-201ENST00000320159 C8orf34Q49A92 452 aa26.82■■□□□ 1.88
ZNF48-201ENST00000320159 TRPM2O94759 1503 aa26.81■■□□□ 1.88
ZNF48-201ENST00000320159 SEC24BO95487 1268 aa26.81■■□□□ 1.88
ZNF48-201ENST00000320159 TSR2Q969E8 191 aaKnown RBP26.81■■□□□ 1.88
ZNF48-201ENST00000320159 GGNBP2Q9H3C7 697 aa26.81■■□□□ 1.88
ZNF48-201ENST00000320159 PPM1GO15355 546 aaPredicted RBP26.81■■□□□ 1.88
ZNF48-201ENST00000320159 RLBP1P12271 317 aa26.8■■□□□ 1.88
ZNF48-201ENST00000320159 ASXL2Q76L83 1435 aa26.8■■□□□ 1.88
ZNF48-201ENST00000320159 PTPRTO14522 1441 aa26.8■■□□□ 1.88
ZNF48-201ENST00000320159 SPHKAPQ2M3C7 1700 aa26.78■■□□□ 1.88
ZNF48-201ENST00000320159 E9PSI1 815 aa26.78■■□□□ 1.88
ZNF48-201ENST00000320159 SRPK2P78362 688 aaKnown RBP26.78■■□□□ 1.88
ZNF48-201ENST00000320159 RNF17Q9BXT8 1623 aaKnown RBP26.78■■□□□ 1.88
ZNF48-201ENST00000320159 MINK1Q8N4C8 1332 aaPredicted RBP26.77■■□□□ 1.88
ZNF48-201ENST00000320159 SPRYD3Q8NCJ5 442 aa26.77■■□□□ 1.88
ZNF48-201ENST00000320159 FAM161AQ3B820 660 aa26.76■■□□□ 1.87
ZNF48-201ENST00000320159 IQGAP1P46940 1657 aa26.76■■□□□ 1.87
ZNF48-201ENST00000320159 LAMC1P11047 1609 aa26.72■■□□□ 1.87
ZNF48-201ENST00000320159 NKTRP30414 1462 aaKnown RBP26.72■■□□□ 1.87
ZNF48-201ENST00000320159 ARXQ96QS3 562 aa26.71■■□□□ 1.87
ZNF48-201ENST00000320159 PIK3C2GO75747 1445 aa26.71■■□□□ 1.87
ZNF48-201ENST00000320159 TRMT2AQ8IZ69 625 aaKnown RBP26.71■■□□□ 1.87
ZNF48-201ENST00000320159 RTEL1-TNFRSF6BF6WH68 1400 aa26.7■■□□□ 1.87
ZNF48-201ENST00000320159 ABCA6Q8N139 1617 aa26.7■■□□□ 1.87
ZNF48-201ENST00000320159 MYOM1P52179 1685 aa26.7■■□□□ 1.86
ZNF48-201ENST00000320159 SLKQ9H2G2 1235 aaPredicted RBP26.7■■□□□ 1.86
ZNF48-201ENST00000320159 PCDHB15Q9Y5E8 787 aa26.69■■□□□ 1.86
ZNF48-201ENST00000320159 NFKBIBQ15653 356 aa26.69■■□□□ 1.86
ZNF48-201ENST00000320159 SYNMO15061 1565 aa26.69■■□□□ 1.86
ZNF48-201ENST00000320159 MLECQ14165 292 aa26.68■■□□□ 1.86
ZNF48-201ENST00000320159 CEP152O94986 1710 aa26.67■■□□□ 1.86
ZNF48-201ENST00000320159 FBXO31Q5XUX0 539 aaPredicted RBP26.67■■□□□ 1.86
ZNF48-201ENST00000320159 CLASP1Q7Z460 1538 aa26.66■■□□□ 1.86
ZNF48-201ENST00000320159 FRAT2O75474 233 aaPredicted RBP26.66■■□□□ 1.86
ZNF48-201ENST00000320159 IDI1Q13907 227 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms