RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 UPF2Q9HAU5 1272 aaKnown RBP19.12■□□□□ 0.65
SCAP-202ENST00000320017 TRAK2O60296 914 aa19.12■□□□□ 0.65
SCAP-202ENST00000320017 ABCC2Q92887 1545 aa19.12■□□□□ 0.65
SCAP-202ENST00000320017 CCDC146Q8IYE0 955 aa19.12■□□□□ 0.65
SCAP-202ENST00000320017 GRPEL1Q9HAV7 217 aa19.11■□□□□ 0.65
SCAP-202ENST00000320017 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
SCAP-202ENST00000320017 SCAPERQ9BY12 1400 aa19.1■□□□□ 0.65
SCAP-202ENST00000320017 SEC24BO95487 1268 aa19.1■□□□□ 0.65
SCAP-202ENST00000320017 MCM4P33991 863 aa19.1■□□□□ 0.65
SCAP-202ENST00000320017 NLRP13Q86W25 1043 aa19.1■□□□□ 0.65
SCAP-202ENST00000320017 ITSN2Q9NZM3 1697 aa19.1■□□□□ 0.65
SCAP-202ENST00000320017 TRAPPC8Q9Y2L5 1435 aa19.1■□□□□ 0.65
SCAP-202ENST00000320017 KDM2BQ8NHM5 1336 aa19.09■□□□□ 0.65
SCAP-202ENST00000320017 RAPGEF3O95398 923 aa19.09■□□□□ 0.65
SCAP-202ENST00000320017 RALBP1Q15311 655 aa19.09■□□□□ 0.65
SCAP-202ENST00000320017 PRDM4Q9UKN5 801 aa19.09■□□□□ 0.65
SCAP-202ENST00000320017 GCC2Q8IWJ2 1684 aa19.08■□□□□ 0.64
SCAP-202ENST00000320017 MBD5Q9P267 1494 aa19.08■□□□□ 0.64
SCAP-202ENST00000320017 BCORL1Q5H9F3 1711 aa19.07■□□□□ 0.64
SCAP-202ENST00000320017 TTC37Q6PGP7 1564 aa19.07■□□□□ 0.64
SCAP-202ENST00000320017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.07■□□□□ 0.643e-6■■■□□ 15.3
SCAP-202ENST00000320017 FSD2A1L4K1 749 aa19.07■□□□□ 0.64
SCAP-202ENST00000320017 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
SCAP-202ENST00000320017 ADAMTS8Q9UP79 889 aa19.06■□□□□ 0.64
SCAP-202ENST00000320017 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
SCAP-202ENST00000320017 NEUROD2Q15784 382 aa19.05■□□□□ 0.64
SCAP-202ENST00000320017 NUTM2DQ5VT03 806 aaPredicted RBP19.05■□□□□ 0.64
SCAP-202ENST00000320017 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.05■□□□□ 0.64
SCAP-202ENST00000320017 CDC42BPAQ5VT25 1732 aa19.04■□□□□ 0.64
SCAP-202ENST00000320017 R3HCC1Q9Y3T6 440 aaKnown RBP19.04■□□□□ 0.64
SCAP-202ENST00000320017 WDR43Q15061 677 aaKnown RBP eCLIP19.03■□□□□ 0.64
SCAP-202ENST00000320017 BRD4O60885 1362 aaPredicted RBP19.03■□□□□ 0.64
SCAP-202ENST00000320017 MSNP26038 577 aaKnown RBP19.03■□□□□ 0.64
SCAP-202ENST00000320017 PLCH2O75038 1416 aa19.03■□□□□ 0.64
SCAP-202ENST00000320017 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
SCAP-202ENST00000320017 SAMD9LQ8IVG5 1584 aa19.02■□□□□ 0.63
SCAP-202ENST00000320017 ASXL2Q76L83 1435 aa19.02■□□□□ 0.63
SCAP-202ENST00000320017 TBC1D2Q9BYX2 928 aa19.02■□□□□ 0.63
SCAP-202ENST00000320017 LRPPRCP42704 1394 aaKnown RBP19.01■□□□□ 0.63
SCAP-202ENST00000320017 ANP32BQ92688 251 aaKnown RBP19.01■□□□□ 0.63
SCAP-202ENST00000320017 BCL11BQ9C0K0 894 aaPredicted RBP19■□□□□ 0.63
SCAP-202ENST00000320017 ARHGEF12Q9NZN5 1544 aa19■□□□□ 0.63
SCAP-202ENST00000320017 ZBTB7CA1YPR0 619 aa19■□□□□ 0.63
SCAP-202ENST00000320017 CANXP27824 592 aaKnown RBP18.99■□□□□ 0.63
SCAP-202ENST00000320017 MLECQ14165 292 aa18.99■□□□□ 0.63
SCAP-202ENST00000320017 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
SCAP-202ENST00000320017 BBXQ8WY36 941 aaPredicted RBP18.99■□□□□ 0.63
SCAP-202ENST00000320017 USP19O94966 1318 aa18.98■□□□□ 0.63
SCAP-202ENST00000320017 ADGRL2O95490 1459 aa18.98■□□□□ 0.63
SCAP-202ENST00000320017 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
SCAP-202ENST00000320017 AMER1Q5JTC6 1135 aaPredicted RBP18.98■□□□□ 0.63
SCAP-202ENST00000320017 DISP3Q9P2K9 1392 aa18.98■□□□□ 0.63
SCAP-202ENST00000320017 FANCAO15360 1455 aa18.97■□□□□ 0.63
SCAP-202ENST00000320017 ANTXR1Q9H6X2 564 aa18.97■□□□□ 0.63
SCAP-202ENST00000320017 TMF1P82094 1093 aa18.96■□□□□ 0.63
SCAP-202ENST00000320017 FAM69CQ0P6D2 419 aa18.96■□□□□ 0.63
SCAP-202ENST00000320017 WDR7Q9Y4E6 1490 aa18.95■□□□□ 0.62
SCAP-202ENST00000320017 PER1O15534 1290 aaPredicted RBP18.95■□□□□ 0.62
SCAP-202ENST00000320017 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
SCAP-202ENST00000320017 CHMP5Q9NZZ3 219 aa18.94■□□□□ 0.62
SCAP-202ENST00000320017 ZCCHC11Q5TAX3 1644 aaKnown RBP18.94■□□□□ 0.62
SCAP-202ENST00000320017 ADCY10Q96PN6 1610 aa18.94■□□□□ 0.62
SCAP-202ENST00000320017 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.93■□□□□ 0.62
SCAP-202ENST00000320017 ADGRL1O94910 1474 aa18.93■□□□□ 0.62
SCAP-202ENST00000320017 RIPK4P57078 832 aa18.93■□□□□ 0.62
SCAP-202ENST00000320017 KANK1Q14678 1352 aa18.92■□□□□ 0.62
SCAP-202ENST00000320017 IGHDP01880 384 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 CDC42BPBQ9Y5S2 1711 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 UQCRHLA0A096LP55 91 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 DDX11L8A8MPP1 907 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 UQCRHP07919 91 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 MAP7D2Q96T17 732 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 SHANK2Q9UPX8 1470 aa18.91■□□□□ 0.62
SCAP-202ENST00000320017 FAM135AQ9P2D6 1515 aa18.9■□□□□ 0.62
SCAP-202ENST00000320017 APAF1O14727 1248 aa18.9■□□□□ 0.62
SCAP-202ENST00000320017 RRP7AQ9Y3A4 280 aaKnown RBP18.9■□□□□ 0.62
SCAP-202ENST00000320017 BCAR3O75815 825 aa18.9■□□□□ 0.62
SCAP-202ENST00000320017 MFAP1P55081 439 aaKnown RBP18.9■□□□□ 0.62
SCAP-202ENST00000320017 GAS2L3Q86XJ1 694 aa18.9■□□□□ 0.62
SCAP-202ENST00000320017 ZSCAN30Q86W11 494 aa18.89■□□□□ 0.61
SCAP-202ENST00000320017 TESK2Q96S53 571 aa18.88■□□□□ 0.61
SCAP-202ENST00000320017 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
SCAP-202ENST00000320017 FOXD4L1Q9NU39 408 aa18.87■□□□□ 0.61
SCAP-202ENST00000320017 NASPP49321 788 aaPredicted RBP18.87■□□□□ 0.61
SCAP-202ENST00000320017 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
SCAP-202ENST00000320017 OFD1O75665 1012 aa18.86■□□□□ 0.61
SCAP-202ENST00000320017 XPCQ01831 940 aaPredicted RBP18.86■□□□□ 0.61
SCAP-202ENST00000320017 SAFB2Q14151 953 aaKnown RBP eCLIP18.86■□□□□ 0.61
SCAP-202ENST00000320017 KDM5CP41229 1560 aa18.86■□□□□ 0.61
SCAP-202ENST00000320017 MAPK8IP3Q9UPT6 1336 aa18.86■□□□□ 0.61
SCAP-202ENST00000320017 HSCBQ8IWL3 235 aa18.86■□□□□ 0.61
SCAP-202ENST00000320017 SPINK5Q9NQ38 1064 aaPredicted RBP18.86■□□□□ 0.61
SCAP-202ENST00000320017 PPP2R1AP30153 589 aa18.86■□□□□ 0.61
SCAP-202ENST00000320017 RALGAPBQ86X10 1494 aa18.85■□□□□ 0.61
SCAP-202ENST00000320017 CHMP4BQ9H444 224 aaKnown RBP18.85■□□□□ 0.61
SCAP-202ENST00000320017 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
SCAP-202ENST00000320017 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
SCAP-202ENST00000320017 SMAP1Q8IYB5 467 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms