RNA–Protein interactions for RNA: ENST00000318809.11

LTBP4-204, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-204ENST00000318809 NUTM2DQ5VT03 806 aaPredicted RBP25.17■■□□□ 1.62
LTBP4-204ENST00000318809 PPLO60437 1756 aa25.17■■□□□ 1.62
LTBP4-204ENST00000318809 TMEM2Q9UHN6 1383 aa25.15■■□□□ 1.62
LTBP4-204ENST00000318809 THEMISQ8N1K5 641 aaPredicted RBP25.15■■□□□ 1.62
LTBP4-204ENST00000318809 ZFYVE9O95405 1425 aa25.15■■□□□ 1.62
LTBP4-204ENST00000318809 RIMS2Q9UQ26 1411 aa25.14■■□□□ 1.62
LTBP4-204ENST00000318809 NBPF8Q3BBV2 869 aa25.14■■□□□ 1.61
LTBP4-204ENST00000318809 ADGRF5Q8IZF2 1346 aa25.13■■□□□ 1.61
LTBP4-204ENST00000318809 MYOM2P54296 1465 aa25.12■■□□□ 1.61
LTBP4-204ENST00000318809 ARHGAP23Q9P227 1491 aa25.11■■□□□ 1.61
LTBP4-204ENST00000318809 SLIT1O75093 1534 aa25.11■■□□□ 1.61
LTBP4-204ENST00000318809 PRAG1Q86YV5 1406 aa25.1■■□□□ 1.61
LTBP4-204ENST00000318809 STAC3Q96MF2 364 aa25.09■■□□□ 1.61
LTBP4-204ENST00000318809 NRXN1Q9ULB1 1477 aa25.09■■□□□ 1.61
LTBP4-204ENST00000318809 VGFO15240 615 aaPredicted RBP25.09■■□□□ 1.61
LTBP4-204ENST00000318809 LTKP29376 864 aa25.09■■□□□ 1.61
LTBP4-204ENST00000318809 LMTK3Q96Q04 1460 aa25.07■■□□□ 1.6
LTBP4-204ENST00000318809 TXNDC2Q86VQ3 553 aa25.06■■□□□ 1.6
LTBP4-204ENST00000318809 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.06■■□□□ 1.64e-7■□□□□ 9.2
LTBP4-204ENST00000318809 SENP3Q9H4L4 574 aaPredicted RBP25.05■■□□□ 1.6
LTBP4-204ENST00000318809 PIK3C2GO75747 1445 aa25.04■■□□□ 1.6
LTBP4-204ENST00000318809 HDGFP51858 240 aaKnown RBP25.03■■□□□ 1.6
LTBP4-204ENST00000318809 HSPA2P54652 639 aa25.03■■□□□ 1.6
LTBP4-204ENST00000318809 EID1Q9Y6B2 187 aa25.02■■□□□ 1.6
LTBP4-204ENST00000318809 SCAF11Q99590 1463 aaKnown RBP25.01■■□□□ 1.59
LTBP4-204ENST00000318809 CFAP70Q5T0N1 1121 aa24.99■■□□□ 1.59
LTBP4-204ENST00000318809 ANKLE2Q86XL3 938 aa24.98■■□□□ 1.59
LTBP4-204ENST00000318809 TRPM1Q7Z4N2 1603 aa24.98■■□□□ 1.59
LTBP4-204ENST00000318809 NBPF1Q3BBV0 1214 aa24.98■■□□□ 1.59
LTBP4-204ENST00000318809 PLEKHG1Q9ULL1 1385 aa24.97■■□□□ 1.59
LTBP4-204ENST00000318809 RALGAPBQ86X10 1494 aa24.96■■□□□ 1.59
LTBP4-204ENST00000318809 C14orf93Q9H972 538 aaKnown RBP24.96■■□□□ 1.59
LTBP4-204ENST00000318809 NRXN3Q9Y4C0 1643 aa24.96■■□□□ 1.59
LTBP4-204ENST00000318809 NCKAP5LQ9HCH0 1330 aa24.95■■□□□ 1.58
LTBP4-204ENST00000318809 SETBP1Q9Y6X0 1596 aa24.94■■□□□ 1.58
LTBP4-204ENST00000318809 IQGAP1P46940 1657 aa24.92■■□□□ 1.58
LTBP4-204ENST00000318809 KIAA1210Q9ULL0 1709 aa24.92■■□□□ 1.58
LTBP4-204ENST00000318809 ALKQ9UM73 1620 aa24.92■■□□□ 1.58
LTBP4-204ENST00000318809 BCANQ96GW7 911 aa24.92■■□□□ 1.58
LTBP4-204ENST00000318809 ADAMTS13Q76LX8 1427 aa24.91■■□□□ 1.58
LTBP4-204ENST00000318809 ROCK2O75116 1388 aaKnown RBP24.91■■□□□ 1.58
LTBP4-204ENST00000318809 POLR1AO95602 1720 aaPredicted RBP24.91■■□□□ 1.58
LTBP4-204ENST00000318809 GPRASP1Q5JY77 1395 aa24.89■■□□□ 1.58
LTBP4-204ENST00000318809 TMEM132EQ6IEE7 984 aa24.89■■□□□ 1.57
LTBP4-204ENST00000318809 SLC26A8Q96RN1 970 aa24.89■■□□□ 1.57
LTBP4-204ENST00000318809 MED14O60244 1454 aa24.89■■□□□ 1.57
LTBP4-204ENST00000318809 SETD1AO15047 1707 aaKnown RBP24.88■■□□□ 1.57
LTBP4-204ENST00000318809 ASXL1Q8IXJ9 1541 aa24.88■■□□□ 1.57
LTBP4-204ENST00000318809 LAMC1P11047 1609 aa24.87■■□□□ 1.57
LTBP4-204ENST00000318809 ADGRB1O14514 1584 aa24.87■■□□□ 1.57
LTBP4-204ENST00000318809 NPHP4O75161 1426 aaPredicted RBP24.87■■□□□ 1.57
LTBP4-204ENST00000318809 ZNF316A6NFI3 1004 aaPredicted RBP24.86■■□□□ 1.57
LTBP4-204ENST00000318809 CARD11Q9BXL7 1154 aa24.86■■□□□ 1.57
LTBP4-204ENST00000318809 STRCQ7RTU9 1775 aa24.85■■□□□ 1.57
LTBP4-204ENST00000318809 METP08581 1390 aa24.84■■□□□ 1.57
LTBP4-204ENST00000318809 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
LTBP4-204ENST00000318809 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
LTBP4-204ENST00000318809 DIP2AQ14689 1571 aa24.8■■□□□ 1.56
LTBP4-204ENST00000318809 YTHDC2Q9H6S0 1430 aaKnown RBP24.77■■□□□ 1.56
LTBP4-204ENST00000318809 USP47Q96K76 1375 aa24.77■■□□□ 1.56
LTBP4-204ENST00000318809 STK26Q9P289 416 aa24.77■■□□□ 1.56
LTBP4-204ENST00000318809 PTPRUQ92729 1446 aa24.75■■□□□ 1.55
LTBP4-204ENST00000318809 TRAK1Q9UPV9 953 aa24.75■■□□□ 1.55
LTBP4-204ENST00000318809 LRPPRCP42704 1394 aaKnown RBP24.74■■□□□ 1.55
LTBP4-204ENST00000318809 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
LTBP4-204ENST00000318809 EIF4G2P78344 907 aaKnown RBP eCLIP24.74■■□□□ 1.55
LTBP4-204ENST00000318809 HIRIP3Q9BW71 556 aaPredicted RBP24.74■■□□□ 1.55
LTBP4-204ENST00000318809 ABCC11Q96J66 1382 aa24.71■■□□□ 1.55
LTBP4-204ENST00000318809 PIK3R4Q99570 1358 aa24.7■■□□□ 1.54
LTBP4-204ENST00000318809 ST20-MTHFSA0A0A6YYL1 179 aa24.69■■□□□ 1.54
LTBP4-204ENST00000318809 AMOTL2Q9Y2J4 779 aa24.69■■□□□ 1.54
LTBP4-204ENST00000318809 TECPR2O15040 1411 aa24.67■■□□□ 1.54
LTBP4-204ENST00000318809 ARHGEF28Q8N1W1 1705 aaKnown RBP24.67■■□□□ 1.54
LTBP4-204ENST00000318809 CHD2O14647 1828 aaKnown RBP24.67■■□□□ 1.54
LTBP4-204ENST00000318809 XRN1Q8IZH2 1706 aaKnown RBP24.66■■□□□ 1.54
LTBP4-204ENST00000318809 ROBO2Q9HCK4 1378 aa24.65■■□□□ 1.54
LTBP4-204ENST00000318809 DLC1Q96QB1 1528 aa24.65■■□□□ 1.54
LTBP4-204ENST00000318809 KCNA6P17658 529 aa24.65■■□□□ 1.54
LTBP4-204ENST00000318809 KNDC1Q76NI1 1749 aa24.65■■□□□ 1.54
LTBP4-204ENST00000318809 EIF3AQ14152 1382 aaKnown RBP24.65■■□□□ 1.54
LTBP4-204ENST00000318809 WAPLQ7Z5K2 1190 aa24.64■■□□□ 1.53
LTBP4-204ENST00000318809 PRAM1Q96QH2 718 aa24.64■■□□□ 1.53
LTBP4-204ENST00000318809 DMRT2Q9Y5R5 561 aa24.64■■□□□ 1.53
LTBP4-204ENST00000318809 PLEKHH1Q9ULM0 1364 aa24.63■■□□□ 1.53
LTBP4-204ENST00000318809 CPS1P31327 1500 aa24.63■■□□□ 1.53
LTBP4-204ENST00000318809 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
LTBP4-204ENST00000318809 TESK2Q96S53 571 aa24.62■■□□□ 1.53
LTBP4-204ENST00000318809 SAFB2Q14151 953 aaKnown RBP eCLIP24.61■■□□□ 1.53
LTBP4-204ENST00000318809 SIRT1Q96EB6 747 aa24.61■■□□□ 1.53
LTBP4-204ENST00000318809 NWD1Q149M9 1564 aa24.6■■□□□ 1.53
LTBP4-204ENST00000318809 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
LTBP4-204ENST00000318809 DIEXFQ68CQ4 756 aaKnown RBP24.6■■□□□ 1.53
LTBP4-204ENST00000318809 PTCH1Q13635 1447 aa24.59■■□□□ 1.53
LTBP4-204ENST00000318809 POGKQ9P215 609 aa24.59■■□□□ 1.53
LTBP4-204ENST00000318809 STRCP1A6NGW2 1772 aa24.59■■□□□ 1.53
LTBP4-204ENST00000318809 QRICH2Q9H0J4 1663 aa24.56■■□□□ 1.52
LTBP4-204ENST00000318809 ZNF335Q9H4Z2 1342 aaPredicted RBP24.56■■□□□ 1.52
LTBP4-204ENST00000318809 C11orf95C9JLR9 678 aaPredicted RBP24.55■■□□□ 1.52
LTBP4-204ENST00000318809 SBNO2Q9Y2G9 1366 aa24.54■■□□□ 1.52
LTBP4-204ENST00000318809 RBM33Q96EV2 1170 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms