RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 CFAP70Q5T0N1 1121 aa22.68■■□□□ 1.22
SLC12A4-201ENST00000316341 MTHFSP49914 203 aa22.68■■□□□ 1.22
SLC12A4-201ENST00000316341 RIPK4P57078 832 aa22.68■■□□□ 1.22
SLC12A4-201ENST00000316341 FGD1P98174 961 aa22.68■■□□□ 1.22
SLC12A4-201ENST00000316341 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
SLC12A4-201ENST00000316341 NAP1L2Q9ULW6 460 aaPredicted RBP22.68■■□□□ 1.22
SLC12A4-201ENST00000316341 SKOR2Q2VWA4 1001 aaPredicted RBP22.67■■□□□ 1.22
SLC12A4-201ENST00000316341 WASHC2CQ9Y4E1 1318 aa22.67■■□□□ 1.22
SLC12A4-201ENST00000316341 ST18O60284 1047 aa22.67■■□□□ 1.22
SLC12A4-201ENST00000316341 SUPT6HQ7KZ85 1726 aaKnown RBP22.67■■□□□ 1.22
SLC12A4-201ENST00000316341 FAM13BQ9NYF5 915 aa22.66■■□□□ 1.22
SLC12A4-201ENST00000316341 MRE11P49959 708 aa22.66■■□□□ 1.22
SLC12A4-201ENST00000316341 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
SLC12A4-201ENST00000316341 AMER1Q5JTC6 1135 aaPredicted RBP22.65■■□□□ 1.22
SLC12A4-201ENST00000316341 PTPRGP23470 1445 aa22.65■■□□□ 1.22
SLC12A4-201ENST00000316341 PDE3AQ14432 1141 aa22.65■■□□□ 1.22
SLC12A4-201ENST00000316341 TSR2Q969E8 191 aaKnown RBP22.65■■□□□ 1.22
SLC12A4-201ENST00000316341 NGEFQ8N5V2 710 aa22.64■■□□□ 1.22
SLC12A4-201ENST00000316341 TMEM132EQ6IEE7 984 aa22.64■■□□□ 1.21
SLC12A4-201ENST00000316341 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
SLC12A4-201ENST00000316341 SYAP1Q96A49 352 aaPredicted RBP22.62■■□□□ 1.21
SLC12A4-201ENST00000316341 HAP1P54257 671 aaPredicted RBP22.62■■□□□ 1.21
SLC12A4-201ENST00000316341 SLFN5Q08AF3 891 aa22.62■■□□□ 1.21
SLC12A4-201ENST00000316341 GGNBP2Q9H3C7 697 aa22.62■■□□□ 1.21
SLC12A4-201ENST00000316341 MCTP1Q6DN14 999 aa22.61■■□□□ 1.21
SLC12A4-201ENST00000316341 KIAA1211Q6ZU35 1233 aa22.61■■□□□ 1.21
SLC12A4-201ENST00000316341 MINK1Q8N4C8 1332 aaPredicted RBP22.61■■□□□ 1.21
SLC12A4-201ENST00000316341 RPRD2Q5VT52 1461 aaKnown RBP22.61■■□□□ 1.21
SLC12A4-201ENST00000316341 EPRSP07814 1512 aaKnown RBP22.6■■□□□ 1.21
SLC12A4-201ENST00000316341 C9orf84Q5VXU9 1444 aa22.6■■□□□ 1.21
SLC12A4-201ENST00000316341 EXOSC9Q06265 439 aaKnown RBP22.6■■□□□ 1.21
SLC12A4-201ENST00000316341 NUTM2FA1L443 756 aa22.59■■□□□ 1.21
SLC12A4-201ENST00000316341 ABCC5O15440 1437 aa22.59■■□□□ 1.21
SLC12A4-201ENST00000316341 BICRAQ9NZM4 1560 aa22.59■■□□□ 1.21
SLC12A4-201ENST00000316341 SLC12A5Q9H2X9 1139 aa22.58■■□□□ 1.21
SLC12A4-201ENST00000316341 ERBINQ96RT1 1412 aa22.58■■□□□ 1.21
SLC12A4-201ENST00000316341 RILPL2Q969X0 211 aa22.58■■□□□ 1.21
SLC12A4-201ENST00000316341 LMOD2Q6P5Q4 547 aa22.57■■□□□ 1.2
SLC12A4-201ENST00000316341 C1orf115Q9H7X2 142 aa22.57■■□□□ 1.2
SLC12A4-201ENST00000316341 HMMRO75330 724 aa22.57■■□□□ 1.2
SLC12A4-201ENST00000316341 EVC2Q86UK5 1308 aa22.57■■□□□ 1.2
SLC12A4-201ENST00000316341 MCM4P33991 863 aa22.57■■□□□ 1.2
SLC12A4-201ENST00000316341 NASPP49321 788 aaPredicted RBP22.55■■□□□ 1.2
SLC12A4-201ENST00000316341 ROCK1Q13464 1354 aa22.55■■□□□ 1.2
SLC12A4-201ENST00000316341 HMOX1P09601 288 aa22.55■■□□□ 1.2
SLC12A4-201ENST00000316341 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
SLC12A4-201ENST00000316341 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
SLC12A4-201ENST00000316341 AFAP1Q8N556 730 aa22.54■■□□□ 1.2
SLC12A4-201ENST00000316341 CABP2Q9NPB3 220 aa22.54■■□□□ 1.2
SLC12A4-201ENST00000316341 STK31Q9BXU1 1019 aa22.53■■□□□ 1.2
SLC12A4-201ENST00000316341 RNF214Q8ND24 703 aa22.53■■□□□ 1.2
SLC12A4-201ENST00000316341 R3HCC1Q9Y3T6 440 aaKnown RBP22.52■■□□□ 1.2
SLC12A4-201ENST00000316341 HMGXB3Q12766 1538 aa22.52■■□□□ 1.2
SLC12A4-201ENST00000316341 TROQ12816 1431 aaPredicted RBP22.52■■□□□ 1.2
SLC12A4-201ENST00000316341 WWC1Q8IX03 1113 aa22.51■■□□□ 1.19
SLC12A4-201ENST00000316341 CAVIN1Q6NZI2 390 aaKnown RBP22.51■■□□□ 1.19
SLC12A4-201ENST00000316341 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
SLC12A4-201ENST00000316341 IGHDP01880 384 aa22.5■■□□□ 1.19
SLC12A4-201ENST00000316341 GRPEL1Q9HAV7 217 aa22.5■■□□□ 1.19
SLC12A4-201ENST00000316341 KIF16BQ96L93 1317 aa22.5■■□□□ 1.19
SLC12A4-201ENST00000316341 NOB1Q9ULX3 412 aaKnown RBP22.5■■□□□ 1.19
SLC12A4-201ENST00000316341 AAMPQ13685 434 aa22.49■■□□□ 1.19
SLC12A4-201ENST00000316341 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
SLC12A4-201ENST00000316341 RBM10P98175 930 aaKnown RBP22.47■■□□□ 1.19
SLC12A4-201ENST00000316341 LMOD3Q0VAK6 560 aa22.47■■□□□ 1.19
SLC12A4-201ENST00000316341 TBC1D2Q9BYX2 928 aa22.47■■□□□ 1.19
SLC12A4-201ENST00000316341 MVPQ14764 893 aaKnown RBP22.46■■□□□ 1.19
SLC12A4-201ENST00000316341 CDK11BP21127 795 aaKnown RBP22.46■■□□□ 1.19
SLC12A4-201ENST00000316341 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.19
SLC12A4-201ENST00000316341 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
SLC12A4-201ENST00000316341 GOLGA6L6A8MZA4 724 aa22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 REC8O95072 547 aa22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 CHMP3Q9Y3E7 222 aa22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 ESPNB1AK53 854 aa22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 NUCB2P80303 420 aa22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 ANO2Q9NQ90 1003 aa22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 A0A0G2JS52 829 aa22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 VGFO15240 615 aaPredicted RBP22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.44■■□□□ 1.18
SLC12A4-201ENST00000316341 MPNDQ8N594 471 aa22.43■■□□□ 1.18
SLC12A4-201ENST00000316341 PEG3Q9GZU2 1588 aa22.43■■□□□ 1.18
SLC12A4-201ENST00000316341 PHF14O94880 888 aa22.43■■□□□ 1.18
SLC12A4-201ENST00000316341 CDC45O75419 566 aa22.42■■□□□ 1.18
SLC12A4-201ENST00000316341 PRPF40AO75400 957 aaKnown RBP22.42■■□□□ 1.18
SLC12A4-201ENST00000316341 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
SLC12A4-201ENST00000316341 C8orf34Q49A92 452 aa22.42■■□□□ 1.18
SLC12A4-201ENST00000316341 API5Q9BZZ5 524 aaKnown RBP22.41■■□□□ 1.18
SLC12A4-201ENST00000316341 DISP3Q9P2K9 1392 aa22.41■■□□□ 1.18
SLC12A4-201ENST00000316341 LTV1Q96GA3 475 aaPredicted RBP22.41■■□□□ 1.18
SLC12A4-201ENST00000316341 RARSP54136 660 aaKnown RBP22.4■■□□□ 1.18
SLC12A4-201ENST00000316341 INTS3Q68E01 1043 aaKnown RBP22.4■■□□□ 1.18
SLC12A4-201ENST00000316341 ATF7IPQ6VMQ6 1270 aa22.4■■□□□ 1.18
SLC12A4-201ENST00000316341 DHX29Q7Z478 1369 aaKnown RBP22.39■■□□□ 1.17
SLC12A4-201ENST00000316341 NRDCO43847 1150 aa22.39■■□□□ 1.17
SLC12A4-201ENST00000316341 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
SLC12A4-201ENST00000316341 CAMSAP2Q08AD1 1489 aa22.37■■□□□ 1.17
SLC12A4-201ENST00000316341 PRKAR2BP31323 418 aa22.37■■□□□ 1.17
SLC12A4-201ENST00000316341 PKNOX2Q96KN3 472 aa22.37■■□□□ 1.17
SLC12A4-201ENST00000316341 LRPPRCP42704 1394 aaKnown RBP22.37■■□□□ 1.17
SLC12A4-201ENST00000316341 WDR63Q8IWG1 891 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms