RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 NOS1P29475 1434 aa6.58□□□□□ -1.36
POLR2B-201ENST00000314595 ASXL1Q8IXJ9 1541 aa6.58□□□□□ -1.36
POLR2B-201ENST00000314595 TMEM94Q12767 1356 aa6.57□□□□□ -1.36
POLR2B-201ENST00000314595 ATRNO75882 1429 aa6.57□□□□□ -1.36
POLR2B-201ENST00000314595 TMEM131LA2VDJ0 1609 aa6.56□□□□□ -1.36
POLR2B-201ENST00000314595 PLEKHG1Q9ULL1 1385 aa6.56□□□□□ -1.36
POLR2B-201ENST00000314595 TRIM26Q12899 539 aaPredicted RBP6.56□□□□□ -1.36
POLR2B-201ENST00000314595 MSH6P52701 1360 aa6.56□□□□□ -1.36
POLR2B-201ENST00000314595 GCC2Q8IWJ2 1684 aa6.56□□□□□ -1.36
POLR2B-201ENST00000314595 PCGF6Q9BYE7 350 aa6.55□□□□□ -1.36
POLR2B-201ENST00000314595 TRPM2O94759 1503 aa6.55□□□□□ -1.36
POLR2B-201ENST00000314595 RGPD1P0DJD0 1748 aa6.54□□□□□ -1.36
POLR2B-201ENST00000314595 NWD2Q9ULI1 1742 aa6.54□□□□□ -1.36
POLR2B-201ENST00000314595 RXRBP28702 533 aa6.54□□□□□ -1.36
POLR2B-201ENST00000314595 CCNB3Q8WWL7 1395 aa6.54□□□□□ -1.36
POLR2B-201ENST00000314595 RGPD3A6NKT7 1758 aaPredicted RBP6.54□□□□□ -1.36
POLR2B-201ENST00000314595 RGPD4Q7Z3J3 1758 aa6.54□□□□□ -1.36
POLR2B-201ENST00000314595 DISP2A7MBM2 1401 aa6.54□□□□□ -1.36
POLR2B-201ENST00000314595 MTUS2Q5JR59 1369 aa6.54□□□□□ -1.36
POLR2B-201ENST00000314595 ACIN1Q9UKV3 1341 aaKnown RBP6.53□□□□□ -1.36
POLR2B-201ENST00000314595 NEXMIFQ5QGS0 1516 aa6.52□□□□□ -1.36
POLR2B-201ENST00000314595 NRXN3Q9Y4C0 1643 aa6.52□□□□□ -1.37
POLR2B-201ENST00000314595 RBM6P78332 1123 aaKnown RBP6.52□□□□□ -1.37
POLR2B-201ENST00000314595 NALCNQ8IZF0 1738 aa6.52□□□□□ -1.37
POLR2B-201ENST00000314595 RREB1Q92766 1687 aa6.52□□□□□ -1.37
POLR2B-201ENST00000314595 FBXO31Q5XUX0 539 aaPredicted RBP6.51□□□□□ -1.37
POLR2B-201ENST00000314595 BLMP54132 1417 aaPredicted RBP6.51□□□□□ -1.37
POLR2B-201ENST00000314595 LTKP29376 864 aa6.51□□□□□ -1.37
POLR2B-201ENST00000314595 SLAIN2Q9P270 581 aa6.51□□□□□ -1.37
POLR2B-201ENST00000314595 MYO5BQ9ULV0 1848 aa6.51□□□□□ -1.37
POLR2B-201ENST00000314595 RALGAPBQ86X10 1494 aa6.51□□□□□ -1.37
POLR2B-201ENST00000314595 TNS1Q9HBL0 1735 aaKnown RBP6.5□□□□□ -1.37
POLR2B-201ENST00000314595 PNPLA6Q8IY17 1366 aa6.5□□□□□ -1.37
POLR2B-201ENST00000314595 ZRANB1Q9UGI0 708 aa6.5□□□□□ -1.37
POLR2B-201ENST00000314595 MST1RQ04912 1400 aa6.5□□□□□ -1.37
POLR2B-201ENST00000314595 WASHC2CQ9Y4E1 1318 aa6.5□□□□□ -1.37
POLR2B-201ENST00000314595 MYOM2P54296 1465 aa6.49□□□□□ -1.37
POLR2B-201ENST00000314595 HNRNPMP52272 730 aaKnown RBP eCLIP6.49□□□□□ -1.373e-8■■■■□ 26.6
POLR2B-201ENST00000314595 ADAMTS13Q76LX8 1427 aa6.49□□□□□ -1.37
POLR2B-201ENST00000314595 GGT6Q6P531 493 aa6.49□□□□□ -1.37
POLR2B-201ENST00000314595 BRWD3Q6RI45 1802 aa6.49□□□□□ -1.37
POLR2B-201ENST00000314595 CFDP1Q9UEE9 299 aaPredicted RBP6.48□□□□□ -1.37
POLR2B-201ENST00000314595 EID1Q9Y6B2 187 aa6.48□□□□□ -1.37
POLR2B-201ENST00000314595 FNBP4Q8N3X1 1017 aaPredicted RBP6.48□□□□□ -1.37
POLR2B-201ENST00000314595 TBX22Q9Y458 520 aa6.48□□□□□ -1.37
POLR2B-201ENST00000314595 GLI3P10071 1580 aa6.48□□□□□ -1.37
POLR2B-201ENST00000314595 ADGRL2O95490 1459 aa6.47□□□□□ -1.37
POLR2B-201ENST00000314595 ABCA3Q99758 1704 aa6.47□□□□□ -1.37
POLR2B-201ENST00000314595 CADPS2Q86UW7 1296 aa6.47□□□□□ -1.37
POLR2B-201ENST00000314595 NRAPQ86VF7 1730 aa6.46□□□□□ -1.37
POLR2B-201ENST00000314595 NGLY1Q96IV0 654 aa6.46□□□□□ -1.37
POLR2B-201ENST00000314595 ADGRB2O60241 1585 aa6.46□□□□□ -1.38
POLR2B-201ENST00000314595 AFF2P51816 1311 aa6.46□□□□□ -1.38
POLR2B-201ENST00000314595 KIF1AQ12756 1690 aa6.46□□□□□ -1.38
POLR2B-201ENST00000314595 TXNDC2Q86VQ3 553 aa6.46□□□□□ -1.38
POLR2B-201ENST00000314595 MYT1LQ9UL68 1186 aa6.46□□□□□ -1.38
POLR2B-201ENST00000314595 CDC42BPGQ6DT37 1551 aa6.45□□□□□ -1.38
POLR2B-201ENST00000314595 KIF3BO15066 747 aa6.45□□□□□ -1.38
POLR2B-201ENST00000314595 IFFO2Q5TF58 517 aa6.45□□□□□ -1.38
POLR2B-201ENST00000314595 THSD7AQ9UPZ6 1657 aa6.45□□□□□ -1.38
POLR2B-201ENST00000314595 ADGRL3Q9HAR2 1447 aa6.45□□□□□ -1.38
POLR2B-201ENST00000314595 SLIT2O94813 1529 aa6.45□□□□□ -1.38
POLR2B-201ENST00000314595 PLCH1Q4KWH8 1693 aa6.44□□□□□ -1.38
POLR2B-201ENST00000314595 SLC52A1Q9NWF4 448 aa6.44□□□□□ -1.38
POLR2B-201ENST00000314595 COL24A1Q17RW2 1714 aa6.44□□□□□ -1.38
POLR2B-201ENST00000314595 NEUROD1Q13562 356 aa6.44□□□□□ -1.38
POLR2B-201ENST00000314595 C19orf44Q9H6X5 657 aa6.44□□□□□ -1.38
POLR2B-201ENST00000314595 KNDC1Q76NI1 1749 aa6.44□□□□□ -1.38
POLR2B-201ENST00000314595 MYOM3Q5VTT5 1437 aa6.43□□□□□ -1.38
POLR2B-201ENST00000314595 NUP188Q5SRE5 1749 aa6.43□□□□□ -1.38
POLR2B-201ENST00000314595 PARD3Q8TEW0 1356 aa6.43□□□□□ -1.38
POLR2B-201ENST00000314595 USP32Q8NFA0 1604 aa6.43□□□□□ -1.38
POLR2B-201ENST00000314595 PXDNQ92626 1479 aa6.42□□□□□ -1.38
POLR2B-201ENST00000314595 CASZ1Q86V15 1759 aa6.42□□□□□ -1.38
POLR2B-201ENST00000314595 BRINP3Q76B58 766 aa6.42□□□□□ -1.38
POLR2B-201ENST00000314595 PROSER2Q86WR7 435 aaPredicted RBP6.42□□□□□ -1.38
POLR2B-201ENST00000314595 SOS2Q07890 1332 aaPredicted RBP6.42□□□□□ -1.38
POLR2B-201ENST00000314595 RIMS2Q9UQ26 1411 aa6.42□□□□□ -1.38
POLR2B-201ENST00000314595 LRRC59Q96AG4 307 aaKnown RBP6.42□□□□□ -1.38
POLR2B-201ENST00000314595 ONECUT3O60422 494 aaPredicted RBP6.41□□□□□ -1.38
POLR2B-201ENST00000314595 TRPC5Q9UL62 973 aaPredicted RBP6.41□□□□□ -1.38
POLR2B-201ENST00000314595 CRYBG1Q9Y4K1 1723 aa6.41□□□□□ -1.38
POLR2B-201ENST00000314595 PTPRUQ92729 1446 aa6.41□□□□□ -1.38
POLR2B-201ENST00000314595 E9PCH4 1651 aa6.41□□□□□ -1.38
POLR2B-201ENST00000314595 MEX3CQ5U5Q3 659 aaKnown RBP6.4□□□□□ -1.38
POLR2B-201ENST00000314595 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.4□□□□□ -1.38
POLR2B-201ENST00000314595 NINLQ9Y2I6 1382 aa6.4□□□□□ -1.38
POLR2B-201ENST00000314595 HDGFP51858 240 aaKnown RBP6.4□□□□□ -1.38
POLR2B-201ENST00000314595 TRIM52Q96A61 297 aa6.4□□□□□ -1.39
POLR2B-201ENST00000314595 KANK1Q14678 1352 aa6.4□□□□□ -1.39
POLR2B-201ENST00000314595 QTRT2Q9H974 415 aaKnown RBP6.39□□□□□ -1.39
POLR2B-201ENST00000314595 C1orf167Q5SNV9 1468 aa6.39□□□□□ -1.39
POLR2B-201ENST00000314595 RBM33Q96EV2 1170 aaKnown RBP6.38□□□□□ -1.39
POLR2B-201ENST00000314595 CFAP65Q6ZU64 1925 aaKnown RBP6.38□□□□□ -1.39
POLR2B-201ENST00000314595 ZNF644Q9H582 1327 aaPredicted RBP6.38□□□□□ -1.39
POLR2B-201ENST00000314595 FMN2Q9NZ56 1722 aa6.38□□□□□ -1.39
POLR2B-201ENST00000314595 CHD4Q14839 1912 aa6.37□□□□□ -1.39
POLR2B-201ENST00000314595 QSER1Q2KHR3 1735 aa6.37□□□□□ -1.39
POLR2B-201ENST00000314595 COL14A1Q05707 1796 aaKnown RBP6.37□□□□□ -1.39
POLR2B-201ENST00000314595 ABCC5O15440 1437 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms