RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 TMEM2Q9UHN6 1383 aa39.06■■■■□ 3.84
CGREF1-202ENST00000312734 RIMS2Q9UQ26 1411 aa39.06■■■■□ 3.84
CGREF1-202ENST00000312734 NEXMIFQ5QGS0 1516 aa39.06■■■■□ 3.84
CGREF1-202ENST00000312734 ADGRF5Q8IZF2 1346 aa39.03■■■■□ 3.84
CGREF1-202ENST00000312734 VGFO15240 615 aaPredicted RBP39.03■■■■□ 3.84
CGREF1-202ENST00000312734 SENP3Q9H4L4 574 aaPredicted RBP39.03■■■■□ 3.84
CGREF1-202ENST00000312734 NBPF8Q3BBV2 869 aa39.02■■■■□ 3.84
CGREF1-202ENST00000312734 STAC3Q96MF2 364 aa39.02■■■■□ 3.84
CGREF1-202ENST00000312734 PPLO60437 1756 aa39.02■■■■□ 3.84
CGREF1-202ENST00000312734 IFT172Q9UG01 1749 aa39.01■■■■□ 3.84
CGREF1-202ENST00000312734 HDGFP51858 240 aaKnown RBP39.01■■■■□ 3.84
CGREF1-202ENST00000312734 ZFYVE9O95405 1425 aa38.99■■■■□ 3.83
CGREF1-202ENST00000312734 TXNDC2Q86VQ3 553 aa38.99■■■■□ 3.83
CGREF1-202ENST00000312734 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.99■■■■□ 3.83
CGREF1-202ENST00000312734 LTKP29376 864 aa38.96■■■■□ 3.83
CGREF1-202ENST00000312734 EID1Q9Y6B2 187 aa38.96■■■■□ 3.83
CGREF1-202ENST00000312734 MYOM2P54296 1465 aa38.96■■■■□ 3.83
CGREF1-202ENST00000312734 SLIT1O75093 1534 aa38.95■■■■□ 3.83
CGREF1-202ENST00000312734 ARHGAP23Q9P227 1491 aa38.94■■■■□ 3.82
CGREF1-202ENST00000312734 PRAG1Q86YV5 1406 aa38.93■■■■□ 3.82
CGREF1-202ENST00000312734 HSPA2P54652 639 aa38.92■■■■□ 3.82
CGREF1-202ENST00000312734 LMTK3Q96Q04 1460 aa38.9■■■■□ 3.82
CGREF1-202ENST00000312734 ANKLE2Q86XL3 938 aa38.89■■■■□ 3.82
CGREF1-202ENST00000312734 BCANQ96GW7 911 aa38.87■■■■□ 3.81
CGREF1-202ENST00000312734 NRXN1Q9ULB1 1477 aa38.87■■■■□ 3.81
CGREF1-202ENST00000312734 CFAP70Q5T0N1 1121 aa38.84■■■■□ 3.81
CGREF1-202ENST00000312734 PIK3C2GO75747 1445 aa38.83■■■■□ 3.81
CGREF1-202ENST00000312734 SCAF11Q99590 1463 aaKnown RBP38.83■■■■□ 3.81
CGREF1-202ENST00000312734 NCKAP5LQ9HCH0 1330 aa38.81■■■■□ 3.8
CGREF1-202ENST00000312734 NBPF1Q3BBV0 1214 aa38.78■■■■□ 3.8
CGREF1-202ENST00000312734 C14orf93Q9H972 538 aaKnown RBP38.78■■■■□ 3.8
CGREF1-202ENST00000312734 PLEKHG1Q9ULL1 1385 aa38.77■■■■□ 3.8
CGREF1-202ENST00000312734 AEBP2Q6ZN18 517 aaPredicted RBP38.77■■■■□ 3.8
CGREF1-202ENST00000312734 TRPM1Q7Z4N2 1603 aa38.73■■■■□ 3.79
CGREF1-202ENST00000312734 ROCK2O75116 1388 aaKnown RBP38.73■■■■□ 3.79
CGREF1-202ENST00000312734 RALGAPBQ86X10 1494 aa38.71■■■■□ 3.79
CGREF1-202ENST00000312734 SLC26A8Q96RN1 970 aa38.71■■■■□ 3.79
CGREF1-202ENST00000312734 TMEM132EQ6IEE7 984 aa38.69■■■■□ 3.78
CGREF1-202ENST00000312734 CARD11Q9BXL7 1154 aa38.67■■■■□ 3.78
CGREF1-202ENST00000312734 ALKQ9UM73 1620 aa38.67■■■■□ 3.78
CGREF1-202ENST00000312734 SETBP1Q9Y6X0 1596 aa38.67■■■■□ 3.78
CGREF1-202ENST00000312734 NRXN3Q9Y4C0 1643 aa38.67■■■■□ 3.78
CGREF1-202ENST00000312734 IQGAP1P46940 1657 aa38.67■■■■□ 3.78
CGREF1-202ENST00000312734 POLR1AO95602 1720 aaPredicted RBP38.65■■■■□ 3.78
CGREF1-202ENST00000312734 NPHP4O75161 1426 aaPredicted RBP38.65■■■■□ 3.78
CGREF1-202ENST00000312734 KIAA1210Q9ULL0 1709 aa38.64■■■■□ 3.78
CGREF1-202ENST00000312734 ADAMTS13Q76LX8 1427 aa38.64■■■■□ 3.78
CGREF1-202ENST00000312734 MED14O60244 1454 aa38.61■■■■□ 3.77
CGREF1-202ENST00000312734 LAMC1P11047 1609 aa38.6■■■■□ 3.77
CGREF1-202ENST00000312734 TBX22Q9Y458 520 aa38.59■■■■□ 3.77
CGREF1-202ENST00000312734 GPRASP1Q5JY77 1395 aa38.58■■■■□ 3.77
CGREF1-202ENST00000312734 METP08581 1390 aa38.57■■■■□ 3.77
CGREF1-202ENST00000312734 STK26Q9P289 416 aa38.55■■■■□ 3.76
CGREF1-202ENST00000312734 ADGRB1O14514 1584 aa38.55■■■■□ 3.76
CGREF1-202ENST00000312734 STRCQ7RTU9 1775 aa38.54■■■■□ 3.76
CGREF1-202ENST00000312734 SETD1AO15047 1707 aaKnown RBP38.53■■■■□ 3.76
CGREF1-202ENST00000312734 ASXL1Q8IXJ9 1541 aa38.53■■■■□ 3.76
CGREF1-202ENST00000312734 TRAK1Q9UPV9 953 aa38.51■■■■□ 3.76
CGREF1-202ENST00000312734 DIP2AQ14689 1571 aa38.48■■■■□ 3.75
CGREF1-202ENST00000312734 EIF4G2P78344 907 aaKnown RBP eCLIP38.48■■■■□ 3.75
CGREF1-202ENST00000312734 HIRIP3Q9BW71 556 aaPredicted RBP38.47■■■■□ 3.75
CGREF1-202ENST00000312734 USP47Q96K76 1375 aa38.47■■■■□ 3.75
CGREF1-202ENST00000312734 YTHDC2Q9H6S0 1430 aaKnown RBP38.46■■■■□ 3.75
CGREF1-202ENST00000312734 HSPA5P11021 654 aaKnown RBP38.45■■■■□ 3.75
CGREF1-202ENST00000312734 LRPPRCP42704 1394 aaKnown RBP38.41■■■■□ 3.74
CGREF1-202ENST00000312734 PTPRUQ92729 1446 aa38.41■■■■□ 3.74
CGREF1-202ENST00000312734 AMOTL2Q9Y2J4 779 aa38.41■■■■□ 3.74
CGREF1-202ENST00000312734 ST20-MTHFSA0A0A6YYL1 179 aa38.38■■■■□ 3.73
CGREF1-202ENST00000312734 DMRT2Q9Y5R5 561 aa38.38■■■■□ 3.73
CGREF1-202ENST00000312734 PIK3R4Q99570 1358 aa38.37■■■■□ 3.73
CGREF1-202ENST00000312734 ABCC11Q96J66 1382 aa38.36■■■■□ 3.73
CGREF1-202ENST00000312734 EIF3AQ14152 1382 aaKnown RBP38.33■■■■□ 3.73
CGREF1-202ENST00000312734 KCNA6P17658 529 aa38.3■■■■□ 3.72
CGREF1-202ENST00000312734 PRAM1Q96QH2 718 aa38.3■■■■□ 3.72
CGREF1-202ENST00000312734 SAFB2Q14151 953 aaKnown RBP eCLIP38.3■■■■□ 3.72
CGREF1-202ENST00000312734 WAPLQ7Z5K2 1190 aa38.3■■■■□ 3.72
CGREF1-202ENST00000312734 POGKQ9P215 609 aa38.3■■■■□ 3.72
CGREF1-202ENST00000312734 CHD2O14647 1828 aaKnown RBP38.27■■■■□ 3.72
CGREF1-202ENST00000312734 CENPJQ9HC77 1338 aaPredicted RBP38.27■■■■□ 3.72
CGREF1-202ENST00000312734 ROBO2Q9HCK4 1378 aa38.26■■■■□ 3.72
CGREF1-202ENST00000312734 TECPR2O15040 1411 aa38.25■■■■□ 3.71
CGREF1-202ENST00000312734 ARHGEF28Q8N1W1 1705 aaKnown RBP38.25■■■■□ 3.71
CGREF1-202ENST00000312734 DLC1Q96QB1 1528 aa38.24■■■■□ 3.71
CGREF1-202ENST00000312734 PLEKHH1Q9ULM0 1364 aa38.23■■■■□ 3.71
CGREF1-202ENST00000312734 SIRT1Q96EB6 747 aa38.23■■■■□ 3.71
CGREF1-202ENST00000312734 KNDC1Q76NI1 1749 aa38.22■■■■□ 3.71
CGREF1-202ENST00000312734 XRN1Q8IZH2 1706 aaKnown RBP38.22■■■■□ 3.71
CGREF1-202ENST00000312734 CPS1P31327 1500 aa38.2■■■■□ 3.71
CGREF1-202ENST00000312734 TESK2Q96S53 571 aa38.19■■■■□ 3.7
CGREF1-202ENST00000312734 ZNF335Q9H4Z2 1342 aaPredicted RBP38.18■■■■□ 3.7
CGREF1-202ENST00000312734 FAM135BQ49AJ0 1406 aa38.18■■■■□ 3.7
CGREF1-202ENST00000312734 ZNF316A6NFI3 1004 aaPredicted RBP38.16■■■■□ 3.7
CGREF1-202ENST00000312734 RBM33Q96EV2 1170 aaKnown RBP38.16■■■■□ 3.7
CGREF1-202ENST00000312734 PTCH1Q13635 1447 aa38.16■■■■□ 3.7
CGREF1-202ENST00000312734 MINK1Q8N4C8 1332 aaPredicted RBP38.15■■■■□ 3.7
CGREF1-202ENST00000312734 NWD1Q149M9 1564 aa38.14■■■■□ 3.7
CGREF1-202ENST00000312734 PROSER2Q86WR7 435 aaPredicted RBP38.13■■■■□ 3.69
CGREF1-202ENST00000312734 QRICH2Q9H0J4 1663 aa38.12■■■■□ 3.69
CGREF1-202ENST00000312734 STRCP1A6NGW2 1772 aa38.11■■■■□ 3.69
CGREF1-202ENST00000312734 C11orf95C9JLR9 678 aaPredicted RBP38.09■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms