RNA–Protein interactions for RNA: ENST00000311559.13

CYLD-201, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 5 BASIC

Gene CYLD, Length 5,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-201ENST00000311559 TOMM22Q9NS69 142 aa7.57□□□□□ -1.2
CYLD-201ENST00000311559 CCP110O43303 1012 aa7.56□□□□□ -1.2
CYLD-201ENST00000311559 TOP2AP11388 1531 aaKnown RBP7.56□□□□□ -1.2
CYLD-201ENST00000311559 AMPHP49418 695 aa7.56□□□□□ -1.2
CYLD-201ENST00000311559 FOXD4L5Q5VV16 416 aaPredicted RBP7.56□□□□□ -1.2
CYLD-201ENST00000311559 FOXD4L4Q8WXT5 416 aaPredicted RBP7.56□□□□□ -1.2
CYLD-201ENST00000311559 UACAQ9BZF9 1416 aa7.56□□□□□ -1.2
CYLD-201ENST00000311559 FRAT2O75474 233 aaPredicted RBP7.56□□□□□ -1.2
CYLD-201ENST00000311559 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
CYLD-201ENST00000311559 AMOTL1Q8IY63 956 aa7.56□□□□□ -1.2
CYLD-201ENST00000311559 EXOC6Q8TAG9 804 aa7.56□□□□□ -1.2
CYLD-201ENST00000311559 RILPL2Q969X0 211 aa7.56□□□□□ -1.2
CYLD-201ENST00000311559 NAT10Q9H0A0 1025 aaKnown RBP7.56□□□□□ -1.2
CYLD-201ENST00000311559 CCDC191Q8NCU4 936 aa7.55□□□□□ -1.2
CYLD-201ENST00000311559 NGDNQ8NEJ9 315 aaKnown RBP7.55□□□□□ -1.2
CYLD-201ENST00000311559 CRBNQ96SW2 442 aa7.55□□□□□ -1.2
CYLD-201ENST00000311559 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
CYLD-201ENST00000311559 CCDC146Q8IYE0 955 aa7.55□□□□□ -1.2
CYLD-201ENST00000311559 L3MBTL2Q969R5 705 aa7.55□□□□□ -1.2
CYLD-201ENST00000311559 INTS3Q68E01 1043 aaKnown RBP7.55□□□□□ -1.2
CYLD-201ENST00000311559 SLC4A3P48751 1232 aa7.55□□□□□ -1.2
CYLD-201ENST00000311559 PRKRIP1Q9H875 184 aaPredicted RBP7.55□□□□□ -1.2
CYLD-201ENST00000311559 IFT57Q9NWB7 429 aa7.55□□□□□ -1.2
CYLD-201ENST00000311559 BICD2Q8TD16 824 aa7.54□□□□□ -1.2
CYLD-201ENST00000311559 API5Q9BZZ5 524 aaKnown RBP7.54□□□□□ -1.2
CYLD-201ENST00000311559 RDXP35241 583 aaKnown RBP7.54□□□□□ -1.2
CYLD-201ENST00000311559 NASPP49321 788 aaPredicted RBP7.54□□□□□ -1.2
CYLD-201ENST00000311559 MCTP1Q6DN14 999 aa7.54□□□□□ -1.2
CYLD-201ENST00000311559 PCMTD1Q96MG8 357 aaPredicted RBP7.54□□□□□ -1.2
CYLD-201ENST00000311559 NOL10Q9BSC4 688 aaKnown RBP7.54□□□□□ -1.2
CYLD-201ENST00000311559 MBD3O95983 291 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 TRHP20396 242 aaPredicted RBP7.53□□□□□ -1.2
CYLD-201ENST00000311559 NFKBIBQ15653 356 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 VPS53Q5VIR6 699 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 CCDC73Q6ZRK6 1079 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 MYO6Q9UM54 1294 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 CCDC173Q0VFZ6 552 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 NEXNQ0ZGT2 675 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 PATL2C9JE40 543 aaKnown RBP7.53□□□□□ -1.2
CYLD-201ENST00000311559 PDE4CQ08493 712 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 SMC3Q9UQE7 1217 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 SOGA1O94964 1423 aa7.53□□□□□ -1.2
CYLD-201ENST00000311559 KANK4Q5T7N3 995 aaPredicted RBP7.52□□□□□ -1.2
CYLD-201ENST00000311559 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.2
CYLD-201ENST00000311559 CCDC88BA6NC98 1476 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 HSP90AB4PQ58FF6 505 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 CPLX1O14810 134 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 ANO8Q9HCE9 1232 aaPredicted RBP7.52□□□□□ -1.21
CYLD-201ENST00000311559 H0YHG0 523 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 KIF3BO15066 747 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 FOXD1Q16676 465 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 DZIP1LQ8IYY4 767 aaKnown RBP7.52□□□□□ -1.21
CYLD-201ENST00000311559 C22orf23Q9BZE7 217 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 ANO2Q9NQ90 1003 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 CCDC18Q5T9S5 1454 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 KIF7Q2M1P5 1343 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 SMARCA4P51532 1647 aa7.52□□□□□ -1.21
CYLD-201ENST00000311559 APPP05067 770 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 C1orf141Q5JVX7 400 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 CAVIN1Q6NZI2 390 aaKnown RBP7.51□□□□□ -1.21
CYLD-201ENST00000311559 PKNOX2Q96KN3 472 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 CCDC9Q9Y3X0 531 aaKnown RBP7.51□□□□□ -1.21
CYLD-201ENST00000311559 OLFM4Q6UX06 510 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 LEKR1Q6ZMV7 388 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 TCEAL9Q9UHQ7 104 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 MCM2P49736 904 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 TAF3Q5VWG9 929 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 COG6Q9Y2V7 657 aa7.51□□□□□ -1.21
CYLD-201ENST00000311559 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.51□□□□□ -1.21
CYLD-201ENST00000311559 PDS5BQ9NTI5 1447 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 TRDNQ13061 729 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 COG3Q96JB2 828 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 PANK3Q9H999 370 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 DDX58O95786 925 aaKnown RBP7.5□□□□□ -1.21
CYLD-201ENST00000311559 SAFBQ15424 915 aaKnown RBP eCLIP7.5□□□□□ -1.21
CYLD-201ENST00000311559 DHX57Q6P158 1386 aaKnown RBP7.5□□□□□ -1.21
CYLD-201ENST00000311559 EVC2Q86UK5 1308 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 WASHC2CQ9Y4E1 1318 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 TEFQ10587 303 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 ERC2O15083 957 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 IFIT2P09913 472 aaKnown RBP7.5□□□□□ -1.21
CYLD-201ENST00000311559 STAC3Q96MF2 364 aa7.5□□□□□ -1.21
CYLD-201ENST00000311559 VGFO15240 615 aaPredicted RBP7.49□□□□□ -1.21
CYLD-201ENST00000311559 CDC45O75419 566 aa7.49□□□□□ -1.21
CYLD-201ENST00000311559 TRAK2O60296 914 aa7.49□□□□□ -1.21
CYLD-201ENST00000311559 TRIM34Q9BYJ4 488 aa7.49□□□□□ -1.21
CYLD-201ENST00000311559 CTDP1Q9Y5B0 961 aaPredicted RBP7.49□□□□□ -1.21
CYLD-201ENST00000311559 PLIN1O60240 522 aa7.49□□□□□ -1.21
CYLD-201ENST00000311559 PSMA5P28066 241 aa7.49□□□□□ -1.21
CYLD-201ENST00000311559 USP8P40818 1118 aa7.49□□□□□ -1.21
CYLD-201ENST00000311559 FOXD4L6Q3SYB3 417 aaPredicted RBP7.49□□□□□ -1.21
CYLD-201ENST00000311559 FOXD4L3Q6VB84 417 aaPredicted RBP7.49□□□□□ -1.21
CYLD-201ENST00000311559 TSPY26PQ9H489 355 aa7.49□□□□□ -1.21
CYLD-201ENST00000311559 CCDC144AA2RUR9 1427 aa7.48□□□□□ -1.21
CYLD-201ENST00000311559 VPS37CA5D8V6 355 aaPredicted RBP7.48□□□□□ -1.21
CYLD-201ENST00000311559 RRP9O43818 475 aaKnown RBP7.48□□□□□ -1.21
CYLD-201ENST00000311559 PIP4K2AP48426 406 aaPredicted RBP7.48□□□□□ -1.21
CYLD-201ENST00000311559 TTC5Q8N0Z6 440 aa7.48□□□□□ -1.21
CYLD-201ENST00000311559 SMARCE1Q969G3 411 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms