RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
PDE4D-201ENST00000309641 RIMS2Q9UQ26 1411 aa13.33□□□□□ -0.28
PDE4D-201ENST00000309641 SIN3AQ96ST3 1273 aa13.32□□□□□ -0.28
PDE4D-201ENST00000309641 SCAF11Q99590 1463 aaKnown RBP13.32□□□□□ -0.28
PDE4D-201ENST00000309641 POLR1AO95602 1720 aaPredicted RBP13.31□□□□□ -0.28
PDE4D-201ENST00000309641 EID1Q9Y6B2 187 aa13.3□□□□□ -0.28
PDE4D-201ENST00000309641 NEXMIFQ5QGS0 1516 aa13.29□□□□□ -0.28
PDE4D-201ENST00000309641 NPHP4O75161 1426 aaPredicted RBP13.29□□□□□ -0.28
PDE4D-201ENST00000309641 MED14O60244 1454 aa13.29□□□□□ -0.28
PDE4D-201ENST00000309641 PPP1R15AO75807 674 aaPredicted RBP13.27□□□□□ -0.28
PDE4D-201ENST00000309641 NEUROD1Q13562 356 aa13.27□□□□□ -0.28
PDE4D-201ENST00000309641 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.28
PDE4D-201ENST00000309641 IQGAP1P46940 1657 aa13.26□□□□□ -0.29
PDE4D-201ENST00000309641 ADGRF5Q8IZF2 1346 aa13.26□□□□□ -0.29
PDE4D-201ENST00000309641 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDE4D-201ENST00000309641 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
PDE4D-201ENST00000309641 BCANQ96GW7 911 aa13.25□□□□□ -0.29
PDE4D-201ENST00000309641 PLEKHG1Q9ULL1 1385 aa13.25□□□□□ -0.29
PDE4D-201ENST00000309641 PPLO60437 1756 aa13.25□□□□□ -0.29
PDE4D-201ENST00000309641 HDGFP51858 240 aaKnown RBP13.24□□□□□ -0.29
PDE4D-201ENST00000309641 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
PDE4D-201ENST00000309641 RPGRIP1LQ68CZ1 1315 aa13.23□□□□□ -0.29
PDE4D-201ENST00000309641 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
PDE4D-201ENST00000309641 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
PDE4D-201ENST00000309641 ADAMTS13Q76LX8 1427 aa13.23□□□□□ -0.29
PDE4D-201ENST00000309641 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
PDE4D-201ENST00000309641 DCAF11Q8TEB1 546 aa13.22□□□□□ -0.29
PDE4D-201ENST00000309641 NRXN3Q9Y4C0 1643 aa13.22□□□□□ -0.29
PDE4D-201ENST00000309641 CCER1Q8TC90 406 aaPredicted RBP13.21□□□□□ -0.29
PDE4D-201ENST00000309641 L3MBTL2Q969R5 705 aa13.2□□□□□ -0.3
PDE4D-201ENST00000309641 SETBP1Q9Y6X0 1596 aa13.19□□□□□ -0.3
PDE4D-201ENST00000309641 STRCP1A6NGW2 1772 aa13.18□□□□□ -0.3
PDE4D-201ENST00000309641 METP08581 1390 aa13.18□□□□□ -0.3
PDE4D-201ENST00000309641 TBX22Q9Y458 520 aa13.18□□□□□ -0.3
PDE4D-201ENST00000309641 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
PDE4D-201ENST00000309641 MYOM2P54296 1465 aa13.17□□□□□ -0.3
PDE4D-201ENST00000309641 LTBP4Q8N2S1 1624 aa13.17□□□□□ -0.3
PDE4D-201ENST00000309641 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
PDE4D-201ENST00000309641 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
PDE4D-201ENST00000309641 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
PDE4D-201ENST00000309641 CFAP70Q5T0N1 1121 aa13.16□□□□□ -0.3
PDE4D-201ENST00000309641 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
PDE4D-201ENST00000309641 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
PDE4D-201ENST00000309641 TMEM132EQ6IEE7 984 aa13.15□□□□□ -0.3
PDE4D-201ENST00000309641 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
PDE4D-201ENST00000309641 DIP2AQ14689 1571 aa13.14□□□□□ -0.31
PDE4D-201ENST00000309641 KCNA6P17658 529 aa13.13□□□□□ -0.31
PDE4D-201ENST00000309641 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
PDE4D-201ENST00000309641 ASXL1Q8IXJ9 1541 aa13.13□□□□□ -0.31
PDE4D-201ENST00000309641 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
PDE4D-201ENST00000309641 TONSLQ96HA7 1378 aa13.12□□□□□ -0.31
PDE4D-201ENST00000309641 AMOTL2Q9Y2J4 779 aa13.12□□□□□ -0.31
PDE4D-201ENST00000309641 NBPF8Q3BBV2 869 aa13.12□□□□□ -0.31
PDE4D-201ENST00000309641 PRAG1Q86YV5 1406 aa13.11□□□□□ -0.31
PDE4D-201ENST00000309641 STK26Q9P289 416 aa13.1□□□□□ -0.31
PDE4D-201ENST00000309641 NWD1Q149M9 1564 aa13.1□□□□□ -0.31
PDE4D-201ENST00000309641 LRRC7Q96NW7 1537 aa13.1□□□□□ -0.31
PDE4D-201ENST00000309641 NBPF1Q3BBV0 1214 aa13.1□□□□□ -0.31
PDE4D-201ENST00000309641 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
PDE4D-201ENST00000309641 PIK3R4Q99570 1358 aa13.1□□□□□ -0.31
PDE4D-201ENST00000309641 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
PDE4D-201ENST00000309641 XRN1Q8IZH2 1706 aaKnown RBP13.09□□□□□ -0.31
PDE4D-201ENST00000309641 PROSER2Q86WR7 435 aaPredicted RBP13.08□□□□□ -0.31
PDE4D-201ENST00000309641 ADGRB1O14514 1584 aa13.08□□□□□ -0.32
PDE4D-201ENST00000309641 CPS1P31327 1500 aa13.08□□□□□ -0.32
PDE4D-201ENST00000309641 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
PDE4D-201ENST00000309641 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
PDE4D-201ENST00000309641 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
PDE4D-201ENST00000309641 YTHDC2Q9H6S0 1430 aaKnown RBP13.06□□□□□ -0.32
PDE4D-201ENST00000309641 NKTRP30414 1462 aaKnown RBP13.06□□□□□ -0.32
PDE4D-201ENST00000309641 LAMC1P11047 1609 aa13.06□□□□□ -0.32
PDE4D-201ENST00000309641 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
PDE4D-201ENST00000309641 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
PDE4D-201ENST00000309641 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
PDE4D-201ENST00000309641 TRPM1Q7Z4N2 1603 aa13.04□□□□□ -0.32
PDE4D-201ENST00000309641 ABCC11Q96J66 1382 aa13.04□□□□□ -0.32
PDE4D-201ENST00000309641 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
PDE4D-201ENST00000309641 KIAA1210Q9ULL0 1709 aa13.02□□□□□ -0.32
PDE4D-201ENST00000309641 TECPR2O15040 1411 aa13.02□□□□□ -0.33
PDE4D-201ENST00000309641 PTCH1Q13635 1447 aa13.02□□□□□ -0.33
PDE4D-201ENST00000309641 SAFB2Q14151 953 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDE4D-201ENST00000309641 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
PDE4D-201ENST00000309641 ROCK2O75116 1388 aaKnown RBP13□□□□□ -0.33
PDE4D-201ENST00000309641 C14orf37Q86TY3 774 aa13□□□□□ -0.33
PDE4D-201ENST00000309641 PRAM1Q96QH2 718 aa13□□□□□ -0.33
PDE4D-201ENST00000309641 KNDC1Q76NI1 1749 aa13□□□□□ -0.33
PDE4D-201ENST00000309641 NALCNQ8IZF0 1738 aa12.98□□□□□ -0.33
PDE4D-201ENST00000309641 RALGAPBQ86X10 1494 aa12.98□□□□□ -0.33
PDE4D-201ENST00000309641 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.98□□□□□ -0.33
PDE4D-201ENST00000309641 UBAP1LF5GYI3 381 aa12.98□□□□□ -0.33
PDE4D-201ENST00000309641 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
PDE4D-201ENST00000309641 C19orf44Q9H6X5 657 aa12.97□□□□□ -0.33
PDE4D-201ENST00000309641 ARHGEF28Q8N1W1 1705 aaKnown RBP12.97□□□□□ -0.33
PDE4D-201ENST00000309641 IQSEC2Q5JU85 1478 aa12.97□□□□□ -0.33
PDE4D-201ENST00000309641 FAM135BQ49AJ0 1406 aa12.97□□□□□ -0.33
PDE4D-201ENST00000309641 DLC1Q96QB1 1528 aa12.97□□□□□ -0.33
PDE4D-201ENST00000309641 CARD11Q9BXL7 1154 aa12.96□□□□□ -0.33
PDE4D-201ENST00000309641 POGKQ9P215 609 aa12.96□□□□□ -0.33
PDE4D-201ENST00000309641 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.33
PDE4D-201ENST00000309641 MSH6P52701 1360 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms