RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 KIF3BO15066 747 aa19.01■□□□□ 0.63
RUNX3-201ENST00000308873 A2MP01023 1474 aa19.01■□□□□ 0.63
RUNX3-201ENST00000308873 ARHGEF12Q9NZN5 1544 aa19■□□□□ 0.63
RUNX3-201ENST00000308873 ARHGAP5Q13017 1502 aa19■□□□□ 0.63
RUNX3-201ENST00000308873 FTSJ3Q8IY81 847 aaKnown RBP18.99■□□□□ 0.63
RUNX3-201ENST00000308873 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
RUNX3-201ENST00000308873 ITSN2Q9NZM3 1697 aa18.99■□□□□ 0.63
RUNX3-201ENST00000308873 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
RUNX3-201ENST00000308873 POLR1AO95602 1720 aaPredicted RBP18.97■□□□□ 0.63
RUNX3-201ENST00000308873 COL17A1Q9UMD9 1497 aaPredicted RBP18.97■□□□□ 0.63
RUNX3-201ENST00000308873 U2SURPO15042 1029 aaKnown RBP18.97■□□□□ 0.63
RUNX3-201ENST00000308873 EFCAB2Q5VUJ9 269 aa18.97■□□□□ 0.63
RUNX3-201ENST00000308873 SPAG9O60271 1321 aaKnown RBP18.96■□□□□ 0.63
RUNX3-201ENST00000308873 U2AF1L5P0DN76 240 aaPredicted RBP18.96■□□□□ 0.63
RUNX3-201ENST00000308873 U2AF1Q01081 240 aaKnown RBP eCLIP18.96■□□□□ 0.63
RUNX3-201ENST00000308873 BLMP54132 1417 aaPredicted RBP18.96■□□□□ 0.63
RUNX3-201ENST00000308873 SYNJ2O15056 1496 aa18.95■□□□□ 0.62
RUNX3-201ENST00000308873 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
RUNX3-201ENST00000308873 ADGBQ8N7X0 1667 aa18.94■□□□□ 0.62
RUNX3-201ENST00000308873 CGNL1Q0VF96 1302 aa18.94■□□□□ 0.62
RUNX3-201ENST00000308873 TMEM132EQ6IEE7 984 aa18.94■□□□□ 0.62
RUNX3-201ENST00000308873 MAGI2Q86UL8 1455 aa18.93■□□□□ 0.62
RUNX3-201ENST00000308873 WWC1Q8IX03 1113 aa18.93■□□□□ 0.62
RUNX3-201ENST00000308873 TCP11L2Q8N4U5 519 aa18.93■□□□□ 0.62
RUNX3-201ENST00000308873 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
RUNX3-201ENST00000308873 PDZRN3Q9UPQ7 1066 aa18.91■□□□□ 0.62
RUNX3-201ENST00000308873 SYCP2Q9BX26 1530 aa18.91■□□□□ 0.62
RUNX3-201ENST00000308873 ZMYM4Q5VZL5 1548 aa18.9■□□□□ 0.62
RUNX3-201ENST00000308873 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
RUNX3-201ENST00000308873 CEP170Q5SW79 1584 aa18.89■□□□□ 0.61
RUNX3-201ENST00000308873 HSP90AA1P07900 732 aaKnown RBP18.89■□□□□ 0.61
RUNX3-201ENST00000308873 RLBP1P12271 317 aa18.89■□□□□ 0.61
RUNX3-201ENST00000308873 FOXD4L1Q9NU39 408 aa18.89■□□□□ 0.61
RUNX3-201ENST00000308873 PCDHB15Q9Y5E8 787 aa18.89■□□□□ 0.61
RUNX3-201ENST00000308873 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.61
RUNX3-201ENST00000308873 MTHFSP49914 203 aa18.89■□□□□ 0.61
RUNX3-201ENST00000308873 ITPRIPQ8IWB1 547 aa18.89■□□□□ 0.61
RUNX3-201ENST00000308873 TSR2Q969E8 191 aaKnown RBP18.89■□□□□ 0.61
RUNX3-201ENST00000308873 ABCC10Q5T3U5 1492 aa18.89■□□□□ 0.61
RUNX3-201ENST00000308873 EIF4G3O43432 1585 aaKnown RBP18.88■□□□□ 0.61
RUNX3-201ENST00000308873 MAPK8IP3Q9UPT6 1336 aa18.88■□□□□ 0.61
RUNX3-201ENST00000308873 GGT6Q6P531 493 aa18.88■□□□□ 0.61
RUNX3-201ENST00000308873 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
RUNX3-201ENST00000308873 CFAP53Q96M91 514 aa18.87■□□□□ 0.61
RUNX3-201ENST00000308873 STK26Q9P289 416 aa18.87■□□□□ 0.61
RUNX3-201ENST00000308873 GPRASP1Q5JY77 1395 aa18.87■□□□□ 0.61
RUNX3-201ENST00000308873 ADGRF5Q8IZF2 1346 aa18.87■□□□□ 0.61
RUNX3-201ENST00000308873 PMFBP1Q8TBY8 1022 aa18.87■□□□□ 0.61
RUNX3-201ENST00000308873 SMC4Q9NTJ3 1288 aa18.87■□□□□ 0.61
RUNX3-201ENST00000308873 RWDD1Q9H446 243 aaPredicted RBP18.86■□□□□ 0.61
RUNX3-201ENST00000308873 SHANK2Q9UPX8 1470 aa18.86■□□□□ 0.61
RUNX3-201ENST00000308873 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
RUNX3-201ENST00000308873 PDE3AQ14432 1141 aa18.85■□□□□ 0.61
RUNX3-201ENST00000308873 EIF3AQ14152 1382 aaKnown RBP18.85■□□□□ 0.61
RUNX3-201ENST00000308873 NAP1L5Q96NT1 182 aaPredicted RBP18.85■□□□□ 0.61
RUNX3-201ENST00000308873 RARSP54136 660 aaKnown RBP18.84■□□□□ 0.61
RUNX3-201ENST00000308873 RUNDC1Q96C34 613 aa18.82■□□□□ 0.6
RUNX3-201ENST00000308873 TBC1D2Q9BYX2 928 aa18.82■□□□□ 0.6
RUNX3-201ENST00000308873 CDC42BPAQ5VT25 1732 aa18.82■□□□□ 0.6
RUNX3-201ENST00000308873 WDR7Q9Y4E6 1490 aa18.8■□□□□ 0.6
RUNX3-201ENST00000308873 KANK1Q14678 1352 aa18.8■□□□□ 0.6
RUNX3-201ENST00000308873 GOLGA6L3A6NEY3 463 aa18.79■□□□□ 0.6
RUNX3-201ENST00000308873 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
RUNX3-201ENST00000308873 USP19O94966 1318 aa18.78■□□□□ 0.6
RUNX3-201ENST00000308873 ELL2O00472 640 aaPredicted RBP18.78■□□□□ 0.6
RUNX3-201ENST00000308873 SRPK2P78362 688 aaKnown RBP18.78■□□□□ 0.6
RUNX3-201ENST00000308873 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.6
RUNX3-201ENST00000308873 CROCC2H7BZ55 1655 aa18.77■□□□□ 0.6
RUNX3-201ENST00000308873 ZKSCAN2Q63HK3 967 aa18.77■□□□□ 0.6
RUNX3-201ENST00000308873 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.6
RUNX3-201ENST00000308873 C22orf23Q9BZE7 217 aa18.77■□□□□ 0.6
RUNX3-201ENST00000308873 L1TD1Q5T7N2 865 aaKnown RBP18.77■□□□□ 0.6
RUNX3-201ENST00000308873 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
RUNX3-201ENST00000308873 ASXL1Q8IXJ9 1541 aa18.77■□□□□ 0.59
RUNX3-201ENST00000308873 EXOSC9Q06265 439 aaKnown RBP18.76■□□□□ 0.59
RUNX3-201ENST00000308873 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
RUNX3-201ENST00000308873 LNPKQ9C0E8 428 aa18.76■□□□□ 0.59
RUNX3-201ENST00000308873 GGNBP2Q9H3C7 697 aa18.76■□□□□ 0.59
RUNX3-201ENST00000308873 SAMD9LQ8IVG5 1584 aa18.76■□□□□ 0.59
RUNX3-201ENST00000308873 SCAF11Q99590 1463 aaKnown RBP18.76■□□□□ 0.59
RUNX3-201ENST00000308873 PANK2Q9BZ23 570 aa18.76■□□□□ 0.59
RUNX3-201ENST00000308873 TRMT2AQ8IZ69 625 aaKnown RBP18.75■□□□□ 0.59
RUNX3-201ENST00000308873 NSD3Q9BZ95 1437 aa18.75■□□□□ 0.59
RUNX3-201ENST00000308873 TRAPPC8Q9Y2L5 1435 aa18.75■□□□□ 0.59
RUNX3-201ENST00000308873 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
RUNX3-201ENST00000308873 PRDM15P57071 1507 aaPredicted RBP18.73■□□□□ 0.59
RUNX3-201ENST00000308873 NUP160Q12769 1436 aa18.73■□□□□ 0.59
RUNX3-201ENST00000308873 FAM43AQ8N2R8 423 aa18.72■□□□□ 0.59
RUNX3-201ENST00000308873 TBC1D32Q96NH3 1257 aa18.72■□□□□ 0.59
RUNX3-201ENST00000308873 ABCA8O94911 1581 aa18.71■□□□□ 0.59
RUNX3-201ENST00000308873 SCAPERQ9BY12 1400 aa18.71■□□□□ 0.59
RUNX3-201ENST00000308873 C1orf115Q9H7X2 142 aa18.71■□□□□ 0.58
RUNX3-201ENST00000308873 MVPQ14764 893 aaKnown RBP18.7■□□□□ 0.58
RUNX3-201ENST00000308873 RRAGDQ9NQL2 400 aaPredicted RBP18.7■□□□□ 0.58
RUNX3-201ENST00000308873 E9PCH4 1651 aa18.7■□□□□ 0.58
RUNX3-201ENST00000308873 TRAK2O60296 914 aa18.7■□□□□ 0.58
RUNX3-201ENST00000308873 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
RUNX3-201ENST00000308873 APBB1O00213 710 aa18.7■□□□□ 0.58
RUNX3-201ENST00000308873 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
RUNX3-201ENST00000308873 MCM4P33991 863 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms