RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 EZRP15311 586 aaKnown RBP23.28■■□□□ 1.32
BPTF-201ENST00000306378 MCM3P25205 808 aa23.28■■□□□ 1.32
BPTF-201ENST00000306378 E9PSI1 815 aa23.28■■□□□ 1.32
BPTF-201ENST00000306378 TRIM29Q14134 588 aa23.27■■□□□ 1.32
BPTF-201ENST00000306378 GOLGA6L10A0A0M3HER8 536 aa23.26■■□□□ 1.31
BPTF-201ENST00000306378 BICD2Q8TD16 824 aa23.26■■□□□ 1.31
BPTF-201ENST00000306378 GORABQ5T7V8 394 aa23.26■■□□□ 1.31
BPTF-201ENST00000306378 TSPY26PQ9H489 355 aa23.26■■□□□ 1.31
BPTF-201ENST00000306378 UQCRHLA0A096LP55 91 aa23.26■■□□□ 1.31
BPTF-201ENST00000306378 UQCRHP07919 91 aa23.26■■□□□ 1.31
BPTF-201ENST00000306378 LUZP1Q86V48 1076 aa23.25■■□□□ 1.31
BPTF-201ENST00000306378 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.25■■□□□ 1.31
BPTF-201ENST00000306378 RGL3Q3MIN7 710 aa23.25■■□□□ 1.31
BPTF-201ENST00000306378 DDX19BQ9UMR2 479 aa23.25■■□□□ 1.31
BPTF-201ENST00000306378 HMGB1P09429 215 aaKnown RBP23.23■■□□□ 1.31
BPTF-201ENST00000306378 HSPA5P11021 654 aaKnown RBP23.23■■□□□ 1.31
BPTF-201ENST00000306378 SLC26A8Q96RN1 970 aa23.23■■□□□ 1.31
BPTF-201ENST00000306378 SPATA24Q86W54 205 aa23.22■■□□□ 1.31
BPTF-201ENST00000306378 DNAJC2Q99543 621 aaKnown RBP23.22■■□□□ 1.31
BPTF-201ENST00000306378 PCMTD1Q96MG8 357 aaPredicted RBP23.22■■□□□ 1.31
BPTF-201ENST00000306378 HDGFL2Q7Z4V5 671 aaPredicted RBP23.22■■□□□ 1.31
BPTF-201ENST00000306378 INTS3Q68E01 1043 aaKnown RBP23.22■■□□□ 1.31
BPTF-201ENST00000306378 MAP9Q49MG5 647 aa23.21■■□□□ 1.31
BPTF-201ENST00000306378 PDE4CQ08493 712 aa23.21■■□□□ 1.31
BPTF-201ENST00000306378 WWC1Q8IX03 1113 aa23.21■■□□□ 1.31
BPTF-201ENST00000306378 CTR9Q6PD62 1173 aa23.21■■□□□ 1.31
BPTF-201ENST00000306378 GBP3Q9H0R5 595 aa23.2■■□□□ 1.3
BPTF-201ENST00000306378 HDGFP51858 240 aaKnown RBP23.2■■□□□ 1.3
BPTF-201ENST00000306378 NCBP3Q53F19 620 aaKnown RBP23.2■■□□□ 1.3
BPTF-201ENST00000306378 APBB1O00213 710 aa23.2■■□□□ 1.3
BPTF-201ENST00000306378 SYNE3Q6ZMZ3 975 aa23.2■■□□□ 1.3
BPTF-201ENST00000306378 ANO8Q9HCE9 1232 aaPredicted RBP23.2■■□□□ 1.3
BPTF-201ENST00000306378 TRIM5Q9C035 493 aa23.19■■□□□ 1.3
BPTF-201ENST00000306378 MCTP1Q6DN14 999 aa23.19■■□□□ 1.3
BPTF-201ENST00000306378 MICALCLQ6ZW33 695 aa23.18■■□□□ 1.3
BPTF-201ENST00000306378 PABPN1Q86U42 306 aaKnown RBP eCLIP23.18■■□□□ 1.3
BPTF-201ENST00000306378 ESPNB1AK53 854 aa23.18■■□□□ 1.3
BPTF-201ENST00000306378 KINO60870 393 aaKnown RBP23.18■■□□□ 1.3
BPTF-201ENST00000306378 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
BPTF-201ENST00000306378 CT47A1Q5JQC4 288 aaPredicted RBP23.17■■□□□ 1.3
BPTF-201ENST00000306378 TRAK2O60296 914 aa23.17■■□□□ 1.3
BPTF-201ENST00000306378 DCAF11Q8TEB1 546 aa23.17■■□□□ 1.3
BPTF-201ENST00000306378 SHTN1A0MZ66 631 aa23.17■■□□□ 1.3
BPTF-201ENST00000306378 CCDC192P0DO97 292 aa23.17■■□□□ 1.3
BPTF-201ENST00000306378 LRRCC1Q9C099 1032 aa23.17■■□□□ 1.3
BPTF-201ENST00000306378 UACAQ9BZF9 1416 aa23.17■■□□□ 1.3
BPTF-201ENST00000306378 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
BPTF-201ENST00000306378 MCM5P33992 734 aa23.16■■□□□ 1.3
BPTF-201ENST00000306378 NAP1L1P55209 391 aaKnown RBP23.16■■□□□ 1.3
BPTF-201ENST00000306378 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.3
BPTF-201ENST00000306378 RAB3GAP2Q9H2M9 1393 aa23.16■■□□□ 1.3
BPTF-201ENST00000306378 TTLL5Q6EMB2 1281 aa23.16■■□□□ 1.3
BPTF-201ENST00000306378 FOXD4L1Q9NU39 408 aa23.16■■□□□ 1.3
BPTF-201ENST00000306378 ODF2Q5BJF6 829 aa23.16■■□□□ 1.3
BPTF-201ENST00000306378 NACADO15069 1562 aa23.15■■□□□ 1.3
BPTF-201ENST00000306378 MEX3CQ5U5Q3 659 aaKnown RBP23.15■■□□□ 1.3
BPTF-201ENST00000306378 C22orf23Q9BZE7 217 aa23.15■■□□□ 1.3
BPTF-201ENST00000306378 EPS15P42566 896 aa23.14■■□□□ 1.3
BPTF-201ENST00000306378 CLASRPQ8N2M8 674 aaKnown RBP23.14■■□□□ 1.29
BPTF-201ENST00000306378 ZSCAN30Q86W11 494 aa23.14■■□□□ 1.29
BPTF-201ENST00000306378 CPLX1O14810 134 aa23.13■■□□□ 1.29
BPTF-201ENST00000306378 MARCH6O60337 910 aa23.13■■□□□ 1.29
BPTF-201ENST00000306378 PLCD4Q9BRC7 762 aa23.13■■□□□ 1.29
BPTF-201ENST00000306378 CGNQ9P2M7 1197 aaKnown RBP23.13■■□□□ 1.29
BPTF-201ENST00000306378 SMC3Q9UQE7 1217 aa23.13■■□□□ 1.29
BPTF-201ENST00000306378 SAFBQ15424 915 aaKnown RBP eCLIP23.13■■□□□ 1.29
BPTF-201ENST00000306378 SIN3AQ96ST3 1273 aa23.13■■□□□ 1.29
BPTF-201ENST00000306378 CWC22Q9HCG8 908 aaKnown RBP23.12■■□□□ 1.29
BPTF-201ENST00000306378 SSR1P43307 286 aaKnown RBP23.11■■□□□ 1.29
BPTF-201ENST00000306378 CIZ1Q9ULV3 898 aaPredicted RBP23.11■■□□□ 1.29
BPTF-201ENST00000306378 BRPF3Q9ULD4 1205 aa23.11■■□□□ 1.29
BPTF-201ENST00000306378 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
BPTF-201ENST00000306378 NOL8Q76FK4 1167 aaKnown RBP23.1■■□□□ 1.29
BPTF-201ENST00000306378 TERF2IPQ9NYB0 399 aa23.1■■□□□ 1.29
BPTF-201ENST00000306378 DYNC1I1O14576 645 aa23.1■■□□□ 1.29
BPTF-201ENST00000306378 ZNHIT6Q9NWK9 470 aaKnown RBP23.1■■□□□ 1.29
BPTF-201ENST00000306378 IRX3P78415 501 aaPredicted RBP23.09■■□□□ 1.29
BPTF-201ENST00000306378 TIGD1Q96MW7 591 aa23.09■■□□□ 1.29
BPTF-201ENST00000306378 CBFA2T2O43439 604 aa23.09■■□□□ 1.29
BPTF-201ENST00000306378 FILIP1LQ4L180 1135 aa23.09■■□□□ 1.29
BPTF-201ENST00000306378 GRPEL1Q9HAV7 217 aa23.08■■□□□ 1.29
BPTF-201ENST00000306378 TCEAL9Q9UHQ7 104 aa23.08■■□□□ 1.29
BPTF-201ENST00000306378 FOXD4L5Q5VV16 416 aaPredicted RBP23.08■■□□□ 1.28
BPTF-201ENST00000306378 FOXD4L4Q8WXT5 416 aaPredicted RBP23.08■■□□□ 1.28
BPTF-201ENST00000306378 RBM33Q96EV2 1170 aaKnown RBP23.08■■□□□ 1.28
BPTF-201ENST00000306378 FEZ1Q99689 392 aa23.08■■□□□ 1.28
BPTF-201ENST00000306378 BRMS1Q9HCU9 246 aa23.08■■□□□ 1.28
BPTF-201ENST00000306378 HSP90AB2PQ58FF8 381 aa23.08■■□□□ 1.28
BPTF-201ENST00000306378 CCDC146Q8IYE0 955 aa23.07■■□□□ 1.28
BPTF-201ENST00000306378 GBP2P32456 591 aaPredicted RBP23.07■■□□□ 1.28
BPTF-201ENST00000306378 PSMA5P28066 241 aa23.07■■□□□ 1.28
BPTF-201ENST00000306378 POTEB2H3BUK9 544 aa23.07■■□□□ 1.28
BPTF-201ENST00000306378 SEPT7Q16181 437 aaKnown RBP23.07■■□□□ 1.28
BPTF-201ENST00000306378 ENOX2Q16206 610 aaKnown RBP23.07■■□□□ 1.28
BPTF-201ENST00000306378 SRPK2P78362 688 aaKnown RBP23.06■■□□□ 1.28
BPTF-201ENST00000306378 JMYQ8N9B5 988 aa23.06■■□□□ 1.28
BPTF-201ENST00000306378 OFD1O75665 1012 aa23.06■■□□□ 1.28
BPTF-201ENST00000306378 SETSIPP0DME0 302 aa23.06■■□□□ 1.28
BPTF-201ENST00000306378 CUX1P39880 1505 aa23.06■■□□□ 1.28
BPTF-201ENST00000306378 TMX4Q9H1E5 349 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms