RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 DDX49Q9Y6V7 483 aaKnown RBP25.72■■□□□ 1.71
LTBP3-201ENST00000301873 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
LTBP3-201ENST00000301873 HTATSF1O43719 755 aaKnown RBP25.71■■□□□ 1.71
LTBP3-201ENST00000301873 GSE1Q14687 1217 aa25.69■■□□□ 1.7
LTBP3-201ENST00000301873 CCDC184Q52MB2 194 aa25.68■■□□□ 1.7
LTBP3-201ENST00000301873 TCP11L2Q8N4U5 519 aa25.68■■□□□ 1.7
LTBP3-201ENST00000301873 STAC3Q96MF2 364 aa25.68■■□□□ 1.7
LTBP3-201ENST00000301873 KIF16BQ96L93 1317 aa25.67■■□□□ 1.7
LTBP3-201ENST00000301873 API5Q9BZZ5 524 aaKnown RBP25.66■■□□□ 1.7
LTBP3-201ENST00000301873 TOMM22Q9NS69 142 aa25.66■■□□□ 1.7
LTBP3-201ENST00000301873 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
LTBP3-201ENST00000301873 FKBP5Q13451 457 aaPredicted RBP25.65■■□□□ 1.7
LTBP3-201ENST00000301873 FYCO1Q9BQS8 1478 aa25.65■■□□□ 1.7
LTBP3-201ENST00000301873 C1orf141Q5JVX7 400 aa25.65■■□□□ 1.7
LTBP3-201ENST00000301873 CUX1P39880 1505 aa25.65■■□□□ 1.7
LTBP3-201ENST00000301873 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.69
LTBP3-201ENST00000301873 FAM69CQ0P6D2 419 aa25.63■■□□□ 1.69
LTBP3-201ENST00000301873 C9orf78Q9NZ63 289 aaPredicted RBP25.63■■□□□ 1.69
LTBP3-201ENST00000301873 DDX11L8A8MPP1 907 aa25.63■■□□□ 1.69
LTBP3-201ENST00000301873 PRXQ9BXM0 1461 aa25.62■■□□□ 1.69
LTBP3-201ENST00000301873 PPP2R1AP30153 589 aa25.62■■□□□ 1.69
LTBP3-201ENST00000301873 MIA2Q96PC5 1412 aa25.62■■□□□ 1.69
LTBP3-201ENST00000301873 AMER1Q5JTC6 1135 aaPredicted RBP25.62■■□□□ 1.69
LTBP3-201ENST00000301873 SLC12A5Q9H2X9 1139 aa25.62■■□□□ 1.69
LTBP3-201ENST00000301873 GTF2E1P29083 439 aaPredicted RBP25.61■■□□□ 1.69
LTBP3-201ENST00000301873 GNAI1P63096 354 aa25.58■■□□□ 1.69
LTBP3-201ENST00000301873 PNISRQ8TF01 805 aaKnown RBP25.58■■□□□ 1.69
LTBP3-201ENST00000301873 DIAPH3Q9NSV4 1193 aa25.58■■□□□ 1.69
LTBP3-201ENST00000301873 FRAT2O75474 233 aaPredicted RBP25.57■■□□□ 1.68
LTBP3-201ENST00000301873 REC8O95072 547 aa25.57■■□□□ 1.68
LTBP3-201ENST00000301873 SF3A1Q15459 793 aaKnown RBP25.57■■□□□ 1.68
LTBP3-201ENST00000301873 ANO2Q9NQ90 1003 aa25.57■■□□□ 1.68
LTBP3-201ENST00000301873 NUTM2GQ5VZR2 741 aa25.56■■□□□ 1.68
LTBP3-201ENST00000301873 NESP48681 1621 aa25.55■■□□□ 1.68
LTBP3-201ENST00000301873 NEXNQ0ZGT2 675 aa25.55■■□□□ 1.68
LTBP3-201ENST00000301873 CSPP1Q1MSJ5 1256 aa25.55■■□□□ 1.68
LTBP3-201ENST00000301873 TSPYL4Q9UJ04 414 aa25.55■■□□□ 1.68
LTBP3-201ENST00000301873 PSME1Q06323 249 aa25.55■■□□□ 1.68
LTBP3-201ENST00000301873 ERICH3Q5RHP9 1530 aa25.54■■□□□ 1.68
LTBP3-201ENST00000301873 CHMP5Q9NZZ3 219 aa25.53■■□□□ 1.68
LTBP3-201ENST00000301873 C22orf23Q9BZE7 217 aa25.52■■□□□ 1.68
LTBP3-201ENST00000301873 PRG4Q92954 1404 aaPredicted RBP25.52■■□□□ 1.68
LTBP3-201ENST00000301873 PRDM2Q13029 1718 aa25.51■■□□□ 1.67
LTBP3-201ENST00000301873 CLSTN1O94985 981 aa25.51■■□□□ 1.67
LTBP3-201ENST00000301873 KIF3AQ9Y496 699 aa25.51■■□□□ 1.67
LTBP3-201ENST00000301873 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
LTBP3-201ENST00000301873 BCAR3O75815 825 aa25.5■■□□□ 1.67
LTBP3-201ENST00000301873 TTC5Q8N0Z6 440 aa25.5■■□□□ 1.67
LTBP3-201ENST00000301873 EXOSC9Q06265 439 aaKnown RBP25.5■■□□□ 1.67
LTBP3-201ENST00000301873 FAM184AQ8NB25 1140 aa25.5■■□□□ 1.67
LTBP3-201ENST00000301873 H3BQV1 296 aa25.5■■□□□ 1.67
LTBP3-201ENST00000301873 IFFO2Q5TF58 517 aa25.5■■□□□ 1.67
LTBP3-201ENST00000301873 CREBRFQ8IUR6 639 aa25.5■■□□□ 1.67
LTBP3-201ENST00000301873 NLRP6P59044 892 aa25.49■■□□□ 1.67
LTBP3-201ENST00000301873 AKNAQ7Z591 1439 aa25.49■■□□□ 1.67
LTBP3-201ENST00000301873 PHF14O94880 888 aa25.49■■□□□ 1.67
LTBP3-201ENST00000301873 PRKAR2BP31323 418 aa25.48■■□□□ 1.67
LTBP3-201ENST00000301873 IFIT2P09913 472 aaKnown RBP25.48■■□□□ 1.67
LTBP3-201ENST00000301873 RASSF8Q8NHQ8 419 aa25.48■■□□□ 1.67
LTBP3-201ENST00000301873 HFM1A2PYH4 1435 aa25.47■■□□□ 1.67
LTBP3-201ENST00000301873 ZKSCAN1P17029 563 aaPredicted RBP25.47■■□□□ 1.67
LTBP3-201ENST00000301873 NFKBIBQ15653 356 aa25.47■■□□□ 1.67
LTBP3-201ENST00000301873 CCDC34Q96HJ3 373 aa25.47■■□□□ 1.67
LTBP3-201ENST00000301873 TSR2Q969E8 191 aaKnown RBP25.47■■□□□ 1.67
LTBP3-201ENST00000301873 EVA1CP58658 441 aa25.46■■□□□ 1.67
LTBP3-201ENST00000301873 SKOR2Q2VWA4 1001 aaPredicted RBP25.46■■□□□ 1.67
LTBP3-201ENST00000301873 ATP6V1DQ9Y5K8 247 aa25.46■■□□□ 1.67
LTBP3-201ENST00000301873 TPM4P67936 248 aa25.45■■□□□ 1.67
LTBP3-201ENST00000301873 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.45■■□□□ 1.67
LTBP3-201ENST00000301873 RUFY2Q8WXA3 655 aa25.45■■□□□ 1.67
LTBP3-201ENST00000301873 PRAM1Q96QH2 718 aa25.45■■□□□ 1.66
LTBP3-201ENST00000301873 KIAA1107Q9UPP5 1409 aa25.45■■□□□ 1.66
LTBP3-201ENST00000301873 MCTP1Q6DN14 999 aa25.45■■□□□ 1.66
LTBP3-201ENST00000301873 AIMP1Q12904 312 aaKnown RBP25.41■■□□□ 1.66
LTBP3-201ENST00000301873 G3BP1Q13283 466 aaKnown RBP eCLIP25.41■■□□□ 1.66
LTBP3-201ENST00000301873 C9orf84Q5VXU9 1444 aa25.41■■□□□ 1.66
LTBP3-201ENST00000301873 ARHGAP5Q13017 1502 aa25.41■■□□□ 1.66
LTBP3-201ENST00000301873 INTS3Q68E01 1043 aaKnown RBP25.41■■□□□ 1.66
LTBP3-201ENST00000301873 PDZRN3Q9UPQ7 1066 aa25.4■■□□□ 1.66
LTBP3-201ENST00000301873 DDX58O95786 925 aaKnown RBP25.4■■□□□ 1.66
LTBP3-201ENST00000301873 C11orf95C9JLR9 678 aaPredicted RBP25.39■■□□□ 1.65
LTBP3-201ENST00000301873 SYTL4Q96C24 671 aaPredicted RBP25.38■■□□□ 1.65
LTBP3-201ENST00000301873 SCAPERQ9BY12 1400 aa25.38■■□□□ 1.65
LTBP3-201ENST00000301873 C1orf115Q9H7X2 142 aa25.38■■□□□ 1.65
LTBP3-201ENST00000301873 BECN2A8MW95 431 aa25.38■■□□□ 1.65
LTBP3-201ENST00000301873 TXNDC2Q86VQ3 553 aa25.38■■□□□ 1.65
LTBP3-201ENST00000301873 SYNJ2O15056 1496 aa25.37■■□□□ 1.65
LTBP3-201ENST00000301873 AAMPQ13685 434 aa25.37■■□□□ 1.65
LTBP3-201ENST00000301873 POLA1P09884 1462 aaPredicted RBP25.37■■□□□ 1.65
LTBP3-201ENST00000301873 VPS37CA5D8V6 355 aaPredicted RBP25.37■■□□□ 1.65
LTBP3-201ENST00000301873 RAPGEF4Q8WZA2 1011 aa25.37■■□□□ 1.65
LTBP3-201ENST00000301873 CABP1Q9NZU7 370 aa25.37■■□□□ 1.65
LTBP3-201ENST00000301873 TROQ12816 1431 aaPredicted RBP25.37■■□□□ 1.65
LTBP3-201ENST00000301873 NLRP2Q9NX02 1062 aa25.37■■□□□ 1.65
LTBP3-201ENST00000301873 WDR97A6NE52 1622 aa25.36■■□□□ 1.65
LTBP3-201ENST00000301873 PDE3AQ14432 1141 aa25.36■■□□□ 1.65
LTBP3-201ENST00000301873 TMX4Q9H1E5 349 aaPredicted RBP25.36■■□□□ 1.65
LTBP3-201ENST00000301873 ROCK1Q13464 1354 aa25.36■■□□□ 1.65
LTBP3-201ENST00000301873 NAIPQ13075 1403 aa25.35■■□□□ 1.65
LTBP3-201ENST00000301873 APPP05067 770 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms