RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 HDAC5Q9UQL6 1122 aa20.31■□□□□ 0.84
SNAPC4-201ENST00000298532 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
SNAPC4-201ENST00000298532 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
SNAPC4-201ENST00000298532 FGD6Q6ZV73 1430 aa20.29■□□□□ 0.84
SNAPC4-201ENST00000298532 CCDC7Q96M83 1385 aa20.29■□□□□ 0.84
SNAPC4-201ENST00000298532 MRE11P49959 708 aa20.28■□□□□ 0.84
SNAPC4-201ENST00000298532 CNTLNQ9NXG0 1405 aa20.28■□□□□ 0.84
SNAPC4-201ENST00000298532 HSP90B1P14625 803 aaKnown RBP20.28■□□□□ 0.84
SNAPC4-201ENST00000298532 TROQ12816 1431 aaPredicted RBP20.28■□□□□ 0.84
SNAPC4-201ENST00000298532 KIF3AQ9Y496 699 aa20.27■□□□□ 0.84
SNAPC4-201ENST00000298532 SLC4A10Q6U841 1118 aa20.27■□□□□ 0.84
SNAPC4-201ENST00000298532 CUL7Q14999 1698 aa20.26■□□□□ 0.83
SNAPC4-201ENST00000298532 APAF1O14727 1248 aa20.26■□□□□ 0.83
SNAPC4-201ENST00000298532 CCDC9Q9Y3X0 531 aaKnown RBP20.26■□□□□ 0.83
SNAPC4-201ENST00000298532 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
SNAPC4-201ENST00000298532 DDX19BQ9UMR2 479 aa20.25■□□□□ 0.83
SNAPC4-201ENST00000298532 GRIN2AQ12879 1464 aa20.25■□□□□ 0.83
SNAPC4-201ENST00000298532 HECW1Q76N89 1606 aa20.24■□□□□ 0.83
SNAPC4-201ENST00000298532 ZNF771Q7L3S4 317 aaPredicted RBP20.24■□□□□ 0.83
SNAPC4-201ENST00000298532 LRRC9Q6ZRR7 1453 aa20.24■□□□□ 0.83
SNAPC4-201ENST00000298532 NCOA2Q15596 1464 aa20.23■□□□□ 0.83
SNAPC4-201ENST00000298532 GOLGA6L19H0YKK7 550 aa20.23■□□□□ 0.83
SNAPC4-201ENST00000298532 REC8O95072 547 aa20.23■□□□□ 0.83
SNAPC4-201ENST00000298532 KIF7Q2M1P5 1343 aa20.22■□□□□ 0.83
SNAPC4-201ENST00000298532 AAMPQ13685 434 aa20.22■□□□□ 0.83
SNAPC4-201ENST00000298532 BRPF3Q9ULD4 1205 aa20.22■□□□□ 0.83
SNAPC4-201ENST00000298532 NUTM2DQ5VT03 806 aaPredicted RBP20.22■□□□□ 0.83
SNAPC4-201ENST00000298532 IQGAP2Q13576 1575 aa20.22■□□□□ 0.83
SNAPC4-201ENST00000298532 NUCB2P80303 420 aa20.22■□□□□ 0.83
SNAPC4-201ENST00000298532 MAP7D2Q96T17 732 aa20.22■□□□□ 0.83
SNAPC4-201ENST00000298532 EVC2Q86UK5 1308 aa20.22■□□□□ 0.83
SNAPC4-201ENST00000298532 ANKRD50Q9ULJ7 1429 aa20.21■□□□□ 0.83
SNAPC4-201ENST00000298532 URB2Q14146 1524 aaKnown RBP20.21■□□□□ 0.83
SNAPC4-201ENST00000298532 IL27Q8NEV9 243 aa20.2■□□□□ 0.82
SNAPC4-201ENST00000298532 NOC3LQ8WTT2 800 aaKnown RBP20.2■□□□□ 0.82
SNAPC4-201ENST00000298532 C22orf23Q9BZE7 217 aa20.2■□□□□ 0.82
SNAPC4-201ENST00000298532 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
SNAPC4-201ENST00000298532 BECN2A8MW95 431 aa20.2■□□□□ 0.82
SNAPC4-201ENST00000298532 MTERF4Q7Z6M4 381 aaKnown RBP20.2■□□□□ 0.82
SNAPC4-201ENST00000298532 ANO8Q9HCE9 1232 aaPredicted RBP20.2■□□□□ 0.82
SNAPC4-201ENST00000298532 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
SNAPC4-201ENST00000298532 SF3A1Q15459 793 aaKnown RBP20.19■□□□□ 0.82
SNAPC4-201ENST00000298532 DZIP1LQ8IYY4 767 aaKnown RBP20.19■□□□□ 0.82
SNAPC4-201ENST00000298532 MIA2Q96PC5 1412 aa20.19■□□□□ 0.82
SNAPC4-201ENST00000298532 TPM3P06753 285 aa20.19■□□□□ 0.82
SNAPC4-201ENST00000298532 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
SNAPC4-201ENST00000298532 TRAK1Q9UPV9 953 aa20.19■□□□□ 0.82
SNAPC4-201ENST00000298532 FOXD4L6Q3SYB3 417 aaPredicted RBP20.18■□□□□ 0.82
SNAPC4-201ENST00000298532 FOXD4L3Q6VB84 417 aaPredicted RBP20.18■□□□□ 0.82
SNAPC4-201ENST00000298532 RILPL2Q969X0 211 aa20.18■□□□□ 0.82
SNAPC4-201ENST00000298532 ATF3P18847 181 aa20.16■□□□□ 0.82
SNAPC4-201ENST00000298532 AMPHP49418 695 aa20.16■□□□□ 0.82
SNAPC4-201ENST00000298532 GPS2Q13227 327 aa20.16■□□□□ 0.82
SNAPC4-201ENST00000298532 TPM2P07951 284 aa20.15■□□□□ 0.82
SNAPC4-201ENST00000298532 WASHC2AQ641Q2 1341 aa20.15■□□□□ 0.82
SNAPC4-201ENST00000298532 H3BQV1 296 aa20.15■□□□□ 0.82
SNAPC4-201ENST00000298532 IFFO2Q5TF58 517 aa20.15■□□□□ 0.82
SNAPC4-201ENST00000298532 BRD4O60885 1362 aaPredicted RBP20.15■□□□□ 0.82
SNAPC4-201ENST00000298532 FRAT2O75474 233 aaPredicted RBP20.15■□□□□ 0.82
SNAPC4-201ENST00000298532 NASPP49321 788 aaPredicted RBP20.15■□□□□ 0.82
SNAPC4-201ENST00000298532 TRAK2O60296 914 aa20.14■□□□□ 0.81
SNAPC4-201ENST00000298532 CHMP4CQ96CF2 233 aa20.14■□□□□ 0.81
SNAPC4-201ENST00000298532 ZNF592Q92610 1267 aa20.13■□□□□ 0.81
SNAPC4-201ENST00000298532 GORABQ5T7V8 394 aa20.13■□□□□ 0.81
SNAPC4-201ENST00000298532 ZNF644Q9H582 1327 aaPredicted RBP20.13■□□□□ 0.81
SNAPC4-201ENST00000298532 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
SNAPC4-201ENST00000298532 R3HCC1Q9Y3T6 440 aaKnown RBP20.12■□□□□ 0.81
SNAPC4-201ENST00000298532 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
SNAPC4-201ENST00000298532 MCTP1Q6DN14 999 aa20.12■□□□□ 0.81
SNAPC4-201ENST00000298532 FAM184AQ8NB25 1140 aa20.11■□□□□ 0.81
SNAPC4-201ENST00000298532 CD109Q6YHK3 1445 aa20.11■□□□□ 0.81
SNAPC4-201ENST00000298532 SLC52A1Q9NWF4 448 aa20.11■□□□□ 0.81
SNAPC4-201ENST00000298532 CCDC39Q9UFE4 941 aa20.11■□□□□ 0.81
SNAPC4-201ENST00000298532 BACH2Q9BYV9 841 aa20.11■□□□□ 0.81
SNAPC4-201ENST00000298532 A0A0U1RQG5 324 aaPredicted RBP20.1■□□□□ 0.81
SNAPC4-201ENST00000298532 SETQ01105 290 aaPredicted RBP20.1■□□□□ 0.81
SNAPC4-201ENST00000298532 TEX35Q5T0J7 233 aa20.1■□□□□ 0.81
SNAPC4-201ENST00000298532 API5Q9BZZ5 524 aaKnown RBP20.09■□□□□ 0.81
SNAPC4-201ENST00000298532 CCAR2Q8N163 923 aaKnown RBP20.09■□□□□ 0.81
SNAPC4-201ENST00000298532 DIAPH3Q9NSV4 1193 aa20.09■□□□□ 0.81
SNAPC4-201ENST00000298532 INTS3Q68E01 1043 aaKnown RBP20.08■□□□□ 0.81
SNAPC4-201ENST00000298532 COG3Q96JB2 828 aa20.08■□□□□ 0.81
SNAPC4-201ENST00000298532 TMX4Q9H1E5 349 aaPredicted RBP20.07■□□□□ 0.8
SNAPC4-201ENST00000298532 RUFY2Q8WXA3 655 aa20.07■□□□□ 0.8
SNAPC4-201ENST00000298532 RUNDC1Q96C34 613 aa20.07■□□□□ 0.8
SNAPC4-201ENST00000298532 PKNOX2Q96KN3 472 aa20.07■□□□□ 0.8
SNAPC4-201ENST00000298532 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
SNAPC4-201ENST00000298532 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
SNAPC4-201ENST00000298532 RRBP1Q9P2E9 1410 aaKnown RBP20.06■□□□□ 0.8
SNAPC4-201ENST00000298532 EVA1CP58658 441 aa20.06■□□□□ 0.8
SNAPC4-201ENST00000298532 TXNDC2Q86VQ3 553 aa20.06■□□□□ 0.8
SNAPC4-201ENST00000298532 C9orf84Q5VXU9 1444 aa20.05■□□□□ 0.8
SNAPC4-201ENST00000298532 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
SNAPC4-201ENST00000298532 PANK1Q8TE04 598 aa20.05■□□□□ 0.8
SNAPC4-201ENST00000298532 ISY1Q9ULR0 285 aaKnown RBP20.05■□□□□ 0.8
SNAPC4-201ENST00000298532 CHMP3Q9Y3E7 222 aa20.05■□□□□ 0.8
SNAPC4-201ENST00000298532 PSME1Q06323 249 aa20.05■□□□□ 0.8
SNAPC4-201ENST00000298532 CREBRFQ8IUR6 639 aa20.05■□□□□ 0.8
SNAPC4-201ENST00000298532 RASSF8Q8NHQ8 419 aa20.04■□□□□ 0.8
SNAPC4-201ENST00000298532 PLB1Q6P1J6 1458 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms