RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
KCNIP3-201ENST00000295225 PAXIP1Q6ZW49 1069 aaPredicted RBP17.43■□□□□ 0.38
KCNIP3-201ENST00000295225 ARHGEF12Q9NZN5 1544 aa17.43■□□□□ 0.38
KCNIP3-201ENST00000295225 NEUROD2Q15784 382 aa17.43■□□□□ 0.38
KCNIP3-201ENST00000295225 RGS3P49796 1198 aa17.42■□□□□ 0.38
KCNIP3-201ENST00000295225 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
KCNIP3-201ENST00000295225 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
KCNIP3-201ENST00000295225 CHGAP10645 457 aaKnown RBP17.41■□□□□ 0.38
KCNIP3-201ENST00000295225 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
KCNIP3-201ENST00000295225 PLEKHH1Q9ULM0 1364 aa17.41■□□□□ 0.38
KCNIP3-201ENST00000295225 PREX2Q70Z35 1606 aa17.41■□□□□ 0.38
KCNIP3-201ENST00000295225 TRPM1Q7Z4N2 1603 aa17.4■□□□□ 0.38
KCNIP3-201ENST00000295225 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
KCNIP3-201ENST00000295225 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
KCNIP3-201ENST00000295225 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
KCNIP3-201ENST00000295225 CFAP70Q5T0N1 1121 aa17.39■□□□□ 0.37
KCNIP3-201ENST00000295225 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
KCNIP3-201ENST00000295225 BACH2Q9BYV9 841 aa17.39■□□□□ 0.37
KCNIP3-201ENST00000295225 TRAPPC8Q9Y2L5 1435 aa17.39■□□□□ 0.37
KCNIP3-201ENST00000295225 ARHGEF5Q12774 1597 aa17.39■□□□□ 0.37
KCNIP3-201ENST00000295225 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
KCNIP3-201ENST00000295225 APAF1O14727 1248 aa17.38■□□□□ 0.37
KCNIP3-201ENST00000295225 BCAR3O75815 825 aa17.37■□□□□ 0.37
KCNIP3-201ENST00000295225 COL17A1Q9UMD9 1497 aaPredicted RBP17.37■□□□□ 0.37
KCNIP3-201ENST00000295225 KIF3BO15066 747 aa17.36■□□□□ 0.37
KCNIP3-201ENST00000295225 NEFMP07197 916 aa17.36■□□□□ 0.37
KCNIP3-201ENST00000295225 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
KCNIP3-201ENST00000295225 E9PCH4 1651 aa17.36■□□□□ 0.37
KCNIP3-201ENST00000295225 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
KCNIP3-201ENST00000295225 NAP1L5Q96NT1 182 aaPredicted RBP17.35■□□□□ 0.37
KCNIP3-201ENST00000295225 SPAG9O60271 1321 aaKnown RBP17.34■□□□□ 0.37
KCNIP3-201ENST00000295225 TCERG1O14776 1098 aaKnown RBP17.34■□□□□ 0.37
KCNIP3-201ENST00000295225 DUSP27Q5VZP5 1158 aa17.34■□□□□ 0.37
KCNIP3-201ENST00000295225 PDE3BQ13370 1112 aa17.33■□□□□ 0.36
KCNIP3-201ENST00000295225 CDK11BP21127 795 aaKnown RBP17.32■□□□□ 0.36
KCNIP3-201ENST00000295225 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
KCNIP3-201ENST00000295225 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
KCNIP3-201ENST00000295225 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
KCNIP3-201ENST00000295225 GPRASP1Q5JY77 1395 aa17.3■□□□□ 0.36
KCNIP3-201ENST00000295225 PLCH2O75038 1416 aa17.3■□□□□ 0.36
KCNIP3-201ENST00000295225 IL27Q8NEV9 243 aa17.3■□□□□ 0.36
KCNIP3-201ENST00000295225 BCL2L13Q9BXK5 485 aa17.3■□□□□ 0.36
KCNIP3-201ENST00000295225 GOLGA2Q08379 1002 aa17.29■□□□□ 0.36
KCNIP3-201ENST00000295225 SAFB2Q14151 953 aaKnown RBP eCLIP17.29■□□□□ 0.36
KCNIP3-201ENST00000295225 TMEM132EQ6IEE7 984 aa17.29■□□□□ 0.36
KCNIP3-201ENST00000295225 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
KCNIP3-201ENST00000295225 CARD14Q9BXL6 1004 aa17.28■□□□□ 0.36
KCNIP3-201ENST00000295225 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
KCNIP3-201ENST00000295225 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
KCNIP3-201ENST00000295225 WDR7Q9Y4E6 1490 aa17.28■□□□□ 0.36
KCNIP3-201ENST00000295225 ZCCHC11Q5TAX3 1644 aaKnown RBP17.28■□□□□ 0.36
KCNIP3-201ENST00000295225 PRDM15P57071 1507 aaPredicted RBP17.27■□□□□ 0.36
KCNIP3-201ENST00000295225 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
KCNIP3-201ENST00000295225 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
KCNIP3-201ENST00000295225 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
KCNIP3-201ENST00000295225 PANK1Q8TE04 598 aa17.25■□□□□ 0.35
KCNIP3-201ENST00000295225 CFAP65Q6ZU64 1925 aaKnown RBP17.24■□□□□ 0.35
KCNIP3-201ENST00000295225 SLC12A5Q9H2X9 1139 aa17.24■□□□□ 0.35
KCNIP3-201ENST00000295225 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
KCNIP3-201ENST00000295225 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
KCNIP3-201ENST00000295225 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
KCNIP3-201ENST00000295225 GGT6Q6P531 493 aa17.23■□□□□ 0.35
KCNIP3-201ENST00000295225 IGHDP01880 384 aa17.22■□□□□ 0.35
KCNIP3-201ENST00000295225 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
KCNIP3-201ENST00000295225 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
KCNIP3-201ENST00000295225 SLFN5Q08AF3 891 aa17.21■□□□□ 0.35
KCNIP3-201ENST00000295225 UNC13BO14795 1591 aa17.2■□□□□ 0.34
KCNIP3-201ENST00000295225 CANXP27824 592 aaKnown RBP17.2■□□□□ 0.34
KCNIP3-201ENST00000295225 BCCIPQ9P287 314 aaKnown RBP eCLIP17.2■□□□□ 0.34
KCNIP3-201ENST00000295225 ZMYM4Q5VZL5 1548 aa17.19■□□□□ 0.34
KCNIP3-201ENST00000295225 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
KCNIP3-201ENST00000295225 ATP10AO60312 1499 aa17.19■□□□□ 0.34
KCNIP3-201ENST00000295225 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
KCNIP3-201ENST00000295225 IQGAP3Q86VI3 1631 aa17.19■□□□□ 0.34
KCNIP3-201ENST00000295225 C8orf34Q49A92 452 aa17.18■□□□□ 0.34
KCNIP3-201ENST00000295225 MAST1Q9Y2H9 1570 aa17.18■□□□□ 0.34
KCNIP3-201ENST00000295225 ABCC1P33527 1531 aa17.18■□□□□ 0.34
KCNIP3-201ENST00000295225 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
KCNIP3-201ENST00000295225 SEC24BO95487 1268 aa17.17■□□□□ 0.34
KCNIP3-201ENST00000295225 MS4A1P11836 297 aa17.17■□□□□ 0.34
KCNIP3-201ENST00000295225 PLXNC1O60486 1568 aa17.16■□□□□ 0.34
KCNIP3-201ENST00000295225 FANCAO15360 1455 aa17.16■□□□□ 0.34
KCNIP3-201ENST00000295225 CLASP1Q7Z460 1538 aa17.15■□□□□ 0.34
KCNIP3-201ENST00000295225 SCAF11Q99590 1463 aaKnown RBP17.14■□□□□ 0.33
KCNIP3-201ENST00000295225 CENPQQ7L2Z9 268 aaPredicted RBP17.14■□□□□ 0.33
KCNIP3-201ENST00000295225 CLTCL1P53675 1640 aa17.13■□□□□ 0.33
KCNIP3-201ENST00000295225 STK26Q9P289 416 aa17.13■□□□□ 0.33
KCNIP3-201ENST00000295225 MADDQ8WXG6 1647 aa17.12■□□□□ 0.33
KCNIP3-201ENST00000295225 NFKBIBQ15653 356 aa17.12■□□□□ 0.33
KCNIP3-201ENST00000295225 MORC1Q86VD1 984 aa17.12■□□□□ 0.33
KCNIP3-201ENST00000295225 CDCA8Q53HL2 280 aa17.12■□□□□ 0.33
KCNIP3-201ENST00000295225 SPRYD3Q8NCJ5 442 aa17.11■□□□□ 0.33
KCNIP3-201ENST00000295225 ADGRL1O94910 1474 aa17.11■□□□□ 0.33
KCNIP3-201ENST00000295225 FAM161AQ3B820 660 aa17.11■□□□□ 0.33
KCNIP3-201ENST00000295225 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
KCNIP3-201ENST00000295225 BRPF3Q9ULD4 1205 aa17.11■□□□□ 0.33
KCNIP3-201ENST00000295225 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
KCNIP3-201ENST00000295225 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
KCNIP3-201ENST00000295225 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
KCNIP3-201ENST00000295225 RLBP1P12271 317 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms