RNA–Protein interactions for RNA: ENST00000292879.9

U2AF1L4-201, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 1 (best) BASIC

Gene U2AF1L4, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-201ENST00000292879 LTKP29376 864 aa20.84■□□□□ 0.93
U2AF1L4-201ENST00000292879 DHX57Q6P158 1386 aaKnown RBP20.84■□□□□ 0.93
U2AF1L4-201ENST00000292879 PPLO60437 1756 aa20.83■□□□□ 0.93
U2AF1L4-201ENST00000292879 TXNDC2Q86VQ3 553 aa20.83■□□□□ 0.93
U2AF1L4-201ENST00000292879 EID1Q9Y6B2 187 aa20.83■□□□□ 0.93
U2AF1L4-201ENST00000292879 IFT172Q9UG01 1749 aa20.82■□□□□ 0.92
U2AF1L4-201ENST00000292879 SPATA31E1Q6ZUB1 1445 aa20.82■□□□□ 0.92
U2AF1L4-201ENST00000292879 DMRT2Q9Y5R5 561 aa20.82■□□□□ 0.92
U2AF1L4-201ENST00000292879 ZNF326Q5BKZ1 582 aaKnown RBP20.81■□□□□ 0.92
U2AF1L4-201ENST00000292879 PPP1R15AO75807 674 aaPredicted RBP20.78■□□□□ 0.92
U2AF1L4-201ENST00000292879 NUTM2DQ5VT03 806 aaPredicted RBP20.78■□□□□ 0.92
U2AF1L4-201ENST00000292879 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.92
U2AF1L4-201ENST00000292879 NRXN3Q9Y4C0 1643 aa20.76■□□□□ 0.91
U2AF1L4-201ENST00000292879 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.76■□□□□ 0.91
U2AF1L4-201ENST00000292879 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
U2AF1L4-201ENST00000292879 SETBP1Q9Y6X0 1596 aa20.74■□□□□ 0.91
U2AF1L4-201ENST00000292879 HDGFP51858 240 aaKnown RBP20.73■□□□□ 0.91
U2AF1L4-201ENST00000292879 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
U2AF1L4-201ENST00000292879 RGL3Q3MIN7 710 aa20.72■□□□□ 0.91
U2AF1L4-201ENST00000292879 RPGRIP1LQ68CZ1 1315 aa20.71■□□□□ 0.91
U2AF1L4-201ENST00000292879 STRCP1A6NGW2 1772 aa20.7■□□□□ 0.9
U2AF1L4-201ENST00000292879 BCANQ96GW7 911 aa20.7■□□□□ 0.9
U2AF1L4-201ENST00000292879 ZNF335Q9H4Z2 1342 aaPredicted RBP20.7■□□□□ 0.9
U2AF1L4-201ENST00000292879 LTBP4Q8N2S1 1624 aa20.7■□□□□ 0.9
U2AF1L4-201ENST00000292879 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
U2AF1L4-201ENST00000292879 SETD1AO15047 1707 aaKnown RBP20.68■□□□□ 0.9
U2AF1L4-201ENST00000292879 MYOM2P54296 1465 aa20.68■□□□□ 0.9
U2AF1L4-201ENST00000292879 SLC26A8Q96RN1 970 aa20.67■□□□□ 0.9
U2AF1L4-201ENST00000292879 NWD1Q149M9 1564 aa20.66■□□□□ 0.9
U2AF1L4-201ENST00000292879 VGFO15240 615 aaPredicted RBP20.64■□□□□ 0.89
U2AF1L4-201ENST00000292879 CHD2O14647 1828 aaKnown RBP20.64■□□□□ 0.89
U2AF1L4-201ENST00000292879 ADGRF5Q8IZF2 1346 aa20.63■□□□□ 0.89
U2AF1L4-201ENST00000292879 SIN3AQ96ST3 1273 aa20.63■□□□□ 0.89
U2AF1L4-201ENST00000292879 ALKQ9UM73 1620 aa20.63■□□□□ 0.89
U2AF1L4-201ENST00000292879 CPS1P31327 1500 aa20.63■□□□□ 0.89
U2AF1L4-201ENST00000292879 NRXN1Q9ULB1 1477 aa20.62■□□□□ 0.89
U2AF1L4-201ENST00000292879 PIK3C2GO75747 1445 aa20.61■□□□□ 0.89
U2AF1L4-201ENST00000292879 LAMC1P11047 1609 aa20.6■□□□□ 0.89
U2AF1L4-201ENST00000292879 XRN1Q8IZH2 1706 aaKnown RBP20.59■□□□□ 0.89
U2AF1L4-201ENST00000292879 TBX22Q9Y458 520 aa20.59■□□□□ 0.89
U2AF1L4-201ENST00000292879 NEUROD1Q13562 356 aa20.58■□□□□ 0.89
U2AF1L4-201ENST00000292879 ASXL1Q8IXJ9 1541 aa20.58■□□□□ 0.88
U2AF1L4-201ENST00000292879 NKTRP30414 1462 aaKnown RBP20.57■□□□□ 0.88
U2AF1L4-201ENST00000292879 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
U2AF1L4-201ENST00000292879 METP08581 1390 aa20.57■□□□□ 0.88
U2AF1L4-201ENST00000292879 PIK3R4Q99570 1358 aa20.57■□□□□ 0.88
U2AF1L4-201ENST00000292879 PTPRUQ92729 1446 aa20.56■□□□□ 0.88
U2AF1L4-201ENST00000292879 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
U2AF1L4-201ENST00000292879 LRRC7Q96NW7 1537 aa20.55■□□□□ 0.88
U2AF1L4-201ENST00000292879 KCNA6P17658 529 aa20.54■□□□□ 0.88
U2AF1L4-201ENST00000292879 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
U2AF1L4-201ENST00000292879 IQSEC2Q5JU85 1478 aa20.52■□□□□ 0.88
U2AF1L4-201ENST00000292879 CERKQ8TCT0 537 aa20.52■□□□□ 0.88
U2AF1L4-201ENST00000292879 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
U2AF1L4-201ENST00000292879 L3MBTL2Q969R5 705 aa20.5■□□□□ 0.87
U2AF1L4-201ENST00000292879 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
U2AF1L4-201ENST00000292879 KIAA1210Q9ULL0 1709 aa20.49■□□□□ 0.87
U2AF1L4-201ENST00000292879 TONSLQ96HA7 1378 aa20.48■□□□□ 0.87
U2AF1L4-201ENST00000292879 CCER1Q8TC90 406 aaPredicted RBP20.48■□□□□ 0.87
U2AF1L4-201ENST00000292879 STAC3Q96MF2 364 aa20.48■□□□□ 0.87
U2AF1L4-201ENST00000292879 CLSPNQ9HAW4 1339 aa20.48■□□□□ 0.87
U2AF1L4-201ENST00000292879 ADGRB1O14514 1584 aa20.47■□□□□ 0.87
U2AF1L4-201ENST00000292879 CFAP70Q5T0N1 1121 aa20.47■□□□□ 0.87
U2AF1L4-201ENST00000292879 AMOTL2Q9Y2J4 779 aa20.47■□□□□ 0.87
U2AF1L4-201ENST00000292879 C14orf93Q9H972 538 aaKnown RBP20.46■□□□□ 0.87
U2AF1L4-201ENST00000292879 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
U2AF1L4-201ENST00000292879 PTCH1Q13635 1447 aa20.45■□□□□ 0.86
U2AF1L4-201ENST00000292879 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
U2AF1L4-201ENST00000292879 PROSER2Q86WR7 435 aaPredicted RBP20.44■□□□□ 0.86
U2AF1L4-201ENST00000292879 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
U2AF1L4-201ENST00000292879 YTHDC2Q9H6S0 1430 aaKnown RBP20.44■□□□□ 0.86
U2AF1L4-201ENST00000292879 TMEM132EQ6IEE7 984 aa20.43■□□□□ 0.86
U2AF1L4-201ENST00000292879 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
U2AF1L4-201ENST00000292879 NALCNQ8IZF0 1738 aa20.42■□□□□ 0.86
U2AF1L4-201ENST00000292879 ROBO2Q9HCK4 1378 aa20.42■□□□□ 0.86
U2AF1L4-201ENST00000292879 TECPR2O15040 1411 aa20.42■□□□□ 0.86
U2AF1L4-201ENST00000292879 STK26Q9P289 416 aa20.39■□□□□ 0.85
U2AF1L4-201ENST00000292879 ARHGEF28Q8N1W1 1705 aaKnown RBP20.39■□□□□ 0.85
U2AF1L4-201ENST00000292879 DLC1Q96QB1 1528 aa20.37■□□□□ 0.85
U2AF1L4-201ENST00000292879 NCOA3Q9Y6Q9 1424 aa20.37■□□□□ 0.85
U2AF1L4-201ENST00000292879 ABCC11Q96J66 1382 aa20.37■□□□□ 0.85
U2AF1L4-201ENST00000292879 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.37■□□□□ 0.85
U2AF1L4-201ENST00000292879 MSH6P52701 1360 aa20.35■□□□□ 0.85
U2AF1L4-201ENST00000292879 ADGRL3Q9HAR2 1447 aa20.35■□□□□ 0.85
U2AF1L4-201ENST00000292879 C14orf37Q86TY3 774 aa20.34■□□□□ 0.85
U2AF1L4-201ENST00000292879 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
U2AF1L4-201ENST00000292879 PLEKHH1Q9ULM0 1364 aa20.34■□□□□ 0.85
U2AF1L4-201ENST00000292879 NBPF1Q3BBV0 1214 aa20.33■□□□□ 0.85
U2AF1L4-201ENST00000292879 NBPF8Q3BBV2 869 aa20.33■□□□□ 0.85
U2AF1L4-201ENST00000292879 UBAP1LF5GYI3 381 aa20.32■□□□□ 0.84
U2AF1L4-201ENST00000292879 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
U2AF1L4-201ENST00000292879 CDC42BPGQ6DT37 1551 aa20.3■□□□□ 0.84
U2AF1L4-201ENST00000292879 FBXO41Q8TF61 875 aa20.3■□□□□ 0.84
U2AF1L4-201ENST00000292879 TRAK1Q9UPV9 953 aa20.3■□□□□ 0.84
U2AF1L4-201ENST00000292879 ROCK2O75116 1388 aaKnown RBP20.3■□□□□ 0.84
U2AF1L4-201ENST00000292879 DCCP43146 1447 aa20.29■□□□□ 0.84
U2AF1L4-201ENST00000292879 WAPLQ7Z5K2 1190 aa20.29■□□□□ 0.84
U2AF1L4-201ENST00000292879 TOM1O60784 492 aa20.27■□□□□ 0.84
U2AF1L4-201ENST00000292879 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
U2AF1L4-201ENST00000292879 TIMELESSQ9UNS1 1208 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms