RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 KDM2BQ8NHM5 1336 aa17.37■□□□□ 0.37
SLC28A1-201ENST00000286749 TRAPPC8Q9Y2L5 1435 aa17.37■□□□□ 0.37
SLC28A1-201ENST00000286749 TRPM2O94759 1503 aa17.37■□□□□ 0.37
SLC28A1-201ENST00000286749 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
SLC28A1-201ENST00000286749 SCAF11Q99590 1463 aaKnown RBP17.36■□□□□ 0.37
SLC28A1-201ENST00000286749 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
SLC28A1-201ENST00000286749 CLTCL1P53675 1640 aa17.36■□□□□ 0.37
SLC28A1-201ENST00000286749 EFCAB2Q5VUJ9 269 aa17.35■□□□□ 0.37
SLC28A1-201ENST00000286749 ZCCHC11Q5TAX3 1644 aaKnown RBP17.35■□□□□ 0.37
SLC28A1-201ENST00000286749 GOLGA2Q08379 1002 aa17.35■□□□□ 0.37
SLC28A1-201ENST00000286749 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
SLC28A1-201ENST00000286749 CLASP1Q7Z460 1538 aa17.34■□□□□ 0.37
SLC28A1-201ENST00000286749 CENPQQ7L2Z9 268 aaPredicted RBP17.34■□□□□ 0.37
SLC28A1-201ENST00000286749 PIK3C2GO75747 1445 aa17.33■□□□□ 0.37
SLC28A1-201ENST00000286749 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.36
SLC28A1-201ENST00000286749 SCAPERQ9BY12 1400 aa17.33■□□□□ 0.36
SLC28A1-201ENST00000286749 KDM5AP29375 1690 aaKnown RBP17.32■□□□□ 0.36
SLC28A1-201ENST00000286749 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
SLC28A1-201ENST00000286749 CCDC146Q8IYE0 955 aa17.32■□□□□ 0.36
SLC28A1-201ENST00000286749 USP35Q9P2H5 1018 aa17.32■□□□□ 0.36
SLC28A1-201ENST00000286749 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
SLC28A1-201ENST00000286749 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
SLC28A1-201ENST00000286749 SLFN5Q08AF3 891 aa17.3■□□□□ 0.36
SLC28A1-201ENST00000286749 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.3■□□□□ 0.36
SLC28A1-201ENST00000286749 ZFYVE16Q7Z3T8 1539 aa17.3■□□□□ 0.36
SLC28A1-201ENST00000286749 PTPRTO14522 1441 aa17.3■□□□□ 0.36
SLC28A1-201ENST00000286749 DEPDC5O75140 1603 aa17.29■□□□□ 0.36
SLC28A1-201ENST00000286749 TET3O43151 1660 aa17.29■□□□□ 0.36
SLC28A1-201ENST00000286749 AFAP1Q8N556 730 aa17.28■□□□□ 0.36
SLC28A1-201ENST00000286749 EIF3AQ14152 1382 aaKnown RBP17.28■□□□□ 0.36
SLC28A1-201ENST00000286749 NPC1L1Q9UHC9 1359 aa17.28■□□□□ 0.36
SLC28A1-201ENST00000286749 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
SLC28A1-201ENST00000286749 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.35
SLC28A1-201ENST00000286749 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
SLC28A1-201ENST00000286749 APAF1O14727 1248 aa17.26■□□□□ 0.35
SLC28A1-201ENST00000286749 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
SLC28A1-201ENST00000286749 FAM161AQ3B820 660 aa17.26■□□□□ 0.35
SLC28A1-201ENST00000286749 TRMT2AQ8IZ69 625 aaKnown RBP17.26■□□□□ 0.35
SLC28A1-201ENST00000286749 RTEL1-TNFRSF6BF6WH68 1400 aa17.25■□□□□ 0.35
SLC28A1-201ENST00000286749 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
SLC28A1-201ENST00000286749 NKTRP30414 1462 aaKnown RBP17.25■□□□□ 0.35
SLC28A1-201ENST00000286749 RGS3P49796 1198 aa17.23■□□□□ 0.35
SLC28A1-201ENST00000286749 ABCA6Q8N139 1617 aa17.23■□□□□ 0.35
SLC28A1-201ENST00000286749 ERVK-7P63135 1459 aa17.23■□□□□ 0.35
SLC28A1-201ENST00000286749 BCAR3O75815 825 aa17.22■□□□□ 0.35
SLC28A1-201ENST00000286749 CFAP70Q5T0N1 1121 aa17.22■□□□□ 0.35
SLC28A1-201ENST00000286749 UHRF1BP1LA0JNW5 1464 aa17.22■□□□□ 0.35
SLC28A1-201ENST00000286749 MAP3K4Q9Y6R4 1608 aa17.22■□□□□ 0.35
SLC28A1-201ENST00000286749 UGGT1Q9NYU2 1555 aa17.21■□□□□ 0.35
SLC28A1-201ENST00000286749 KANK1Q14678 1352 aa17.21■□□□□ 0.35
SLC28A1-201ENST00000286749 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
SLC28A1-201ENST00000286749 VWDEQ8N2E2 1590 aa17.21■□□□□ 0.35
SLC28A1-201ENST00000286749 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
SLC28A1-201ENST00000286749 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
SLC28A1-201ENST00000286749 DMRT2Q9Y5R5 561 aa17.2■□□□□ 0.34
SLC28A1-201ENST00000286749 INO80Q9ULG1 1556 aaPredicted RBP17.2■□□□□ 0.34
SLC28A1-201ENST00000286749 KIF1BO60333 1816 aa17.2■□□□□ 0.34
SLC28A1-201ENST00000286749 E9PSI1 815 aa17.19■□□□□ 0.34
SLC28A1-201ENST00000286749 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
SLC28A1-201ENST00000286749 ARAP3Q8WWN8 1544 aa17.19■□□□□ 0.34
SLC28A1-201ENST00000286749 NFKBIBQ15653 356 aa17.18■□□□□ 0.34
SLC28A1-201ENST00000286749 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
SLC28A1-201ENST00000286749 ADGRF5Q8IZF2 1346 aa17.18■□□□□ 0.34
SLC28A1-201ENST00000286749 KIF3BO15066 747 aa17.18■□□□□ 0.34
SLC28A1-201ENST00000286749 NEURL4Q96JN8 1562 aa17.17■□□□□ 0.34
SLC28A1-201ENST00000286749 IFT172Q9UG01 1749 aa17.17■□□□□ 0.34
SLC28A1-201ENST00000286749 MYOM2P54296 1465 aa17.17■□□□□ 0.34
SLC28A1-201ENST00000286749 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
SLC28A1-201ENST00000286749 MROH1Q8NDA8 1641 aa17.16■□□□□ 0.34
SLC28A1-201ENST00000286749 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
SLC28A1-201ENST00000286749 IGHDP01880 384 aa17.14■□□□□ 0.33
SLC28A1-201ENST00000286749 MYO3AQ8NEV4 1616 aa17.14■□□□□ 0.33
SLC28A1-201ENST00000286749 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
SLC28A1-201ENST00000286749 FANCAO15360 1455 aa17.13■□□□□ 0.33
SLC28A1-201ENST00000286749 GSE1Q14687 1217 aa17.13■□□□□ 0.33
SLC28A1-201ENST00000286749 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
SLC28A1-201ENST00000286749 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
SLC28A1-201ENST00000286749 NGEFQ8N5V2 710 aa17.12■□□□□ 0.33
SLC28A1-201ENST00000286749 CGNL1Q0VF96 1302 aa17.12■□□□□ 0.33
SLC28A1-201ENST00000286749 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
SLC28A1-201ENST00000286749 CANXP27824 592 aaKnown RBP17.11■□□□□ 0.33
SLC28A1-201ENST00000286749 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
SLC28A1-201ENST00000286749 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
SLC28A1-201ENST00000286749 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
SLC28A1-201ENST00000286749 PANK1Q8TE04 598 aa17.11■□□□□ 0.33
SLC28A1-201ENST00000286749 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
SLC28A1-201ENST00000286749 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
SLC28A1-201ENST00000286749 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
SLC28A1-201ENST00000286749 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
SLC28A1-201ENST00000286749 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
SLC28A1-201ENST00000286749 NINLQ9Y2I6 1382 aa17.09■□□□□ 0.33
SLC28A1-201ENST00000286749 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
SLC28A1-201ENST00000286749 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.33
SLC28A1-201ENST00000286749 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.33
SLC28A1-201ENST00000286749 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.33
SLC28A1-201ENST00000286749 NEUROD2Q15784 382 aa17.08■□□□□ 0.33
SLC28A1-201ENST00000286749 ZC3H13Q5T200 1668 aaKnown RBP17.08■□□□□ 0.32
SLC28A1-201ENST00000286749 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
SLC28A1-201ENST00000286749 NOS1P29475 1434 aa17.07■□□□□ 0.32
SLC28A1-201ENST00000286749 QRICH2Q9H0J4 1663 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms