RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PPLO60437 1756 aa31.38■■■□□ 2.61
PDLIM3-203ENST00000284771 NUTM2DQ5VT03 806 aaPredicted RBP31.38■■■□□ 2.61
PDLIM3-203ENST00000284771 THEMISQ8N1K5 641 aaPredicted RBP31.36■■■□□ 2.61
PDLIM3-203ENST00000284771 TMEM2Q9UHN6 1383 aa31.36■■■□□ 2.61
PDLIM3-203ENST00000284771 ZFYVE9O95405 1425 aa31.35■■■□□ 2.61
PDLIM3-203ENST00000284771 NBPF8Q3BBV2 869 aa31.34■■■□□ 2.61
PDLIM3-203ENST00000284771 RIMS2Q9UQ26 1411 aa31.33■■■□□ 2.61
PDLIM3-203ENST00000284771 ADGRF5Q8IZF2 1346 aa31.33■■■□□ 2.61
PDLIM3-203ENST00000284771 ARHGAP23Q9P227 1491 aa31.31■■■□□ 2.6
PDLIM3-203ENST00000284771 SLIT1O75093 1534 aa31.3■■■□□ 2.6
PDLIM3-203ENST00000284771 MYOM2P54296 1465 aa31.29■■■□□ 2.6
PDLIM3-203ENST00000284771 LTKP29376 864 aa31.29■■■□□ 2.6
PDLIM3-203ENST00000284771 STAC3Q96MF2 364 aa31.29■■■□□ 2.6
PDLIM3-203ENST00000284771 VGFO15240 615 aaPredicted RBP31.28■■■□□ 2.6
PDLIM3-203ENST00000284771 PRAG1Q86YV5 1406 aa31.27■■■□□ 2.6
PDLIM3-203ENST00000284771 LMTK3Q96Q04 1460 aa31.27■■■□□ 2.6
PDLIM3-203ENST00000284771 NRXN1Q9ULB1 1477 aa31.27■■■□□ 2.6
PDLIM3-203ENST00000284771 TXNDC2Q86VQ3 553 aa31.23■■■□□ 2.59
PDLIM3-203ENST00000284771 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.22■■■□□ 2.59
PDLIM3-203ENST00000284771 SENP3Q9H4L4 574 aaPredicted RBP31.22■■■□□ 2.59
PDLIM3-203ENST00000284771 HSPA2P54652 639 aa31.21■■■□□ 2.59
PDLIM3-203ENST00000284771 PIK3C2GO75747 1445 aa31.21■■■□□ 2.59
PDLIM3-203ENST00000284771 HDGFP51858 240 aaKnown RBP31.2■■■□□ 2.59
PDLIM3-203ENST00000284771 EID1Q9Y6B2 187 aa31.19■■■□□ 2.58
PDLIM3-203ENST00000284771 ANKLE2Q86XL3 938 aa31.16■■■□□ 2.58
PDLIM3-203ENST00000284771 SCAF11Q99590 1463 aaKnown RBP31.16■■■□□ 2.58
PDLIM3-203ENST00000284771 CFAP70Q5T0N1 1121 aa31.15■■■□□ 2.58
PDLIM3-203ENST00000284771 NBPF1Q3BBV0 1214 aa31.14■■■□□ 2.58
PDLIM3-203ENST00000284771 TRPM1Q7Z4N2 1603 aa31.13■■■□□ 2.57
PDLIM3-203ENST00000284771 C14orf93Q9H972 538 aaKnown RBP31.13■■■□□ 2.57
PDLIM3-203ENST00000284771 NRXN3Q9Y4C0 1643 aa31.12■■■□□ 2.57
PDLIM3-203ENST00000284771 PLEKHG1Q9ULL1 1385 aa31.11■■■□□ 2.57
PDLIM3-203ENST00000284771 NCKAP5LQ9HCH0 1330 aa31.1■■■□□ 2.57
PDLIM3-203ENST00000284771 RALGAPBQ86X10 1494 aa31.08■■■□□ 2.57
PDLIM3-203ENST00000284771 SETBP1Q9Y6X0 1596 aa31.08■■■□□ 2.57
PDLIM3-203ENST00000284771 IQGAP1P46940 1657 aa31.07■■■□□ 2.56
PDLIM3-203ENST00000284771 ADAMTS13Q76LX8 1427 aa31.06■■■□□ 2.56
PDLIM3-203ENST00000284771 ALKQ9UM73 1620 aa31.06■■■□□ 2.56
PDLIM3-203ENST00000284771 KIAA1210Q9ULL0 1709 aa31.06■■■□□ 2.56
PDLIM3-203ENST00000284771 POLR1AO95602 1720 aaPredicted RBP31.06■■■□□ 2.56
PDLIM3-203ENST00000284771 MED14O60244 1454 aa31.04■■■□□ 2.56
PDLIM3-203ENST00000284771 BCANQ96GW7 911 aa31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 SETD1AO15047 1707 aaKnown RBP31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 ROCK2O75116 1388 aaKnown RBP31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 TMEM132EQ6IEE7 984 aa31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 SLC26A8Q96RN1 970 aa31.03■■■□□ 2.56
PDLIM3-203ENST00000284771 GPRASP1Q5JY77 1395 aa31.01■■■□□ 2.56
PDLIM3-203ENST00000284771 STRCQ7RTU9 1775 aa31.01■■■□□ 2.56
PDLIM3-203ENST00000284771 ADGRB1O14514 1584 aa31.01■■■□□ 2.55
PDLIM3-203ENST00000284771 NPHP4O75161 1426 aaPredicted RBP31■■■□□ 2.55
PDLIM3-203ENST00000284771 ASXL1Q8IXJ9 1541 aa30.99■■■□□ 2.55
PDLIM3-203ENST00000284771 LAMC1P11047 1609 aa30.99■■■□□ 2.55
PDLIM3-203ENST00000284771 CARD11Q9BXL7 1154 aa30.98■■■□□ 2.55
PDLIM3-203ENST00000284771 METP08581 1390 aa30.98■■■□□ 2.55
PDLIM3-203ENST00000284771 TBX22Q9Y458 520 aa30.96■■■□□ 2.55
PDLIM3-203ENST00000284771 AEBP2Q6ZN18 517 aaPredicted RBP30.95■■■□□ 2.55
PDLIM3-203ENST00000284771 DIP2AQ14689 1571 aa30.89■■■□□ 2.54
PDLIM3-203ENST00000284771 YTHDC2Q9H6S0 1430 aaKnown RBP30.87■■■□□ 2.53
PDLIM3-203ENST00000284771 PTPRUQ92729 1446 aa30.87■■■□□ 2.53
PDLIM3-203ENST00000284771 USP47Q96K76 1375 aa30.85■■■□□ 2.53
PDLIM3-203ENST00000284771 STK26Q9P289 416 aa30.85■■■□□ 2.53
PDLIM3-203ENST00000284771 TRAK1Q9UPV9 953 aa30.85■■■□□ 2.53
PDLIM3-203ENST00000284771 HIRIP3Q9BW71 556 aaPredicted RBP30.84■■■□□ 2.53
PDLIM3-203ENST00000284771 LRPPRCP42704 1394 aaKnown RBP30.82■■■□□ 2.52
PDLIM3-203ENST00000284771 HSPA5P11021 654 aaKnown RBP30.82■■■□□ 2.52
PDLIM3-203ENST00000284771 EIF4G2P78344 907 aaKnown RBP eCLIP30.82■■■□□ 2.52
PDLIM3-203ENST00000284771 ABCC11Q96J66 1382 aa30.8■■■□□ 2.52
PDLIM3-203ENST00000284771 PIK3R4Q99570 1358 aa30.8■■■□□ 2.52
PDLIM3-203ENST00000284771 AMOTL2Q9Y2J4 779 aa30.79■■■□□ 2.52
PDLIM3-203ENST00000284771 CHD2O14647 1828 aaKnown RBP30.79■■■□□ 2.52
PDLIM3-203ENST00000284771 ST20-MTHFSA0A0A6YYL1 179 aa30.78■■■□□ 2.52
PDLIM3-203ENST00000284771 ARHGEF28Q8N1W1 1705 aaKnown RBP30.76■■■□□ 2.51
PDLIM3-203ENST00000284771 TECPR2O15040 1411 aa30.76■■■□□ 2.51
PDLIM3-203ENST00000284771 KCNA6P17658 529 aa30.74■■■□□ 2.51
PDLIM3-203ENST00000284771 XRN1Q8IZH2 1706 aaKnown RBP30.73■■■□□ 2.51
PDLIM3-203ENST00000284771 ROBO2Q9HCK4 1378 aa30.73■■■□□ 2.51
PDLIM3-203ENST00000284771 KNDC1Q76NI1 1749 aa30.72■■■□□ 2.51
PDLIM3-203ENST00000284771 WAPLQ7Z5K2 1190 aa30.71■■■□□ 2.51
PDLIM3-203ENST00000284771 DMRT2Q9Y5R5 561 aa30.71■■■□□ 2.51
PDLIM3-203ENST00000284771 DLC1Q96QB1 1528 aa30.71■■■□□ 2.51
PDLIM3-203ENST00000284771 PRAM1Q96QH2 718 aa30.71■■■□□ 2.51
PDLIM3-203ENST00000284771 PLEKHH1Q9ULM0 1364 aa30.7■■■□□ 2.51
PDLIM3-203ENST00000284771 TESK2Q96S53 571 aa30.7■■■□□ 2.5
PDLIM3-203ENST00000284771 CPS1P31327 1500 aa30.69■■■□□ 2.5
PDLIM3-203ENST00000284771 EIF3AQ14152 1382 aaKnown RBP30.69■■■□□ 2.5
PDLIM3-203ENST00000284771 SIRT1Q96EB6 747 aa30.68■■■□□ 2.5
PDLIM3-203ENST00000284771 STRCP1A6NGW2 1772 aa30.68■■■□□ 2.5
PDLIM3-203ENST00000284771 CENPJQ9HC77 1338 aaPredicted RBP30.68■■■□□ 2.5
PDLIM3-203ENST00000284771 NWD1Q149M9 1564 aa30.66■■■□□ 2.5
PDLIM3-203ENST00000284771 SAFB2Q14151 953 aaKnown RBP eCLIP30.66■■■□□ 2.5
PDLIM3-203ENST00000284771 FAM135BQ49AJ0 1406 aa30.65■■■□□ 2.5
PDLIM3-203ENST00000284771 PTCH1Q13635 1447 aa30.65■■■□□ 2.5
PDLIM3-203ENST00000284771 POGKQ9P215 609 aa30.64■■■□□ 2.5
PDLIM3-203ENST00000284771 ZNF335Q9H4Z2 1342 aaPredicted RBP30.63■■■□□ 2.49
PDLIM3-203ENST00000284771 C11orf95C9JLR9 678 aaPredicted RBP30.62■■■□□ 2.49
PDLIM3-203ENST00000284771 QRICH2Q9H0J4 1663 aa30.61■■■□□ 2.49
PDLIM3-203ENST00000284771 RBM33Q96EV2 1170 aaKnown RBP30.6■■■□□ 2.49
PDLIM3-203ENST00000284771 ZNF316A6NFI3 1004 aaPredicted RBP30.58■■■□□ 2.49
PDLIM3-203ENST00000284771 SBNO2Q9Y2G9 1366 aa30.58■■■□□ 2.49
PDLIM3-203ENST00000284771 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms