RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 HOMER1Q86YM7 354 aa17.5■□□□□ 0.39
PTPRO-201ENST00000281171 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
PTPRO-201ENST00000281171 BECN2A8MW95 431 aa17.5■□□□□ 0.39
PTPRO-201ENST00000281171 VGFO15240 615 aaPredicted RBP17.49■□□□□ 0.39
PTPRO-201ENST00000281171 GAPVD1Q14C86 1478 aa17.49■□□□□ 0.39
PTPRO-201ENST00000281171 L3MBTL2Q969R5 705 aa17.49■□□□□ 0.39
PTPRO-201ENST00000281171 SASS6Q6UVJ0 657 aa17.48■□□□□ 0.39
PTPRO-201ENST00000281171 ERICH4A6NGS2 130 aa17.48■□□□□ 0.39
PTPRO-201ENST00000281171 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
PTPRO-201ENST00000281171 GPATCH3Q96I76 525 aa17.47■□□□□ 0.39
PTPRO-201ENST00000281171 CRBNQ96SW2 442 aa17.47■□□□□ 0.39
PTPRO-201ENST00000281171 HNRNPMP52272 730 aaKnown RBP eCLIP17.47■□□□□ 0.39
PTPRO-201ENST00000281171 GIMAP7Q8NHV1 300 aa17.47■□□□□ 0.39
PTPRO-201ENST00000281171 STK26Q9P289 416 aa17.47■□□□□ 0.39
PTPRO-201ENST00000281171 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
PTPRO-201ENST00000281171 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
PTPRO-201ENST00000281171 PAXIP1Q6ZW49 1069 aaPredicted RBP17.46■□□□□ 0.39
PTPRO-201ENST00000281171 CLCN1P35523 988 aa17.46■□□□□ 0.39
PTPRO-201ENST00000281171 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
PTPRO-201ENST00000281171 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
PTPRO-201ENST00000281171 TIGD1Q96MW7 591 aa17.45■□□□□ 0.38
PTPRO-201ENST00000281171 E9PSI1 815 aa17.45■□□□□ 0.38
PTPRO-201ENST00000281171 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
PTPRO-201ENST00000281171 BACH2Q9BYV9 841 aa17.45■□□□□ 0.38
PTPRO-201ENST00000281171 GPATCH11Q8N954 259 aa17.44■□□□□ 0.38
PTPRO-201ENST00000281171 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
PTPRO-201ENST00000281171 GTPBP4Q9BZE4 634 aaKnown RBP17.44■□□□□ 0.38
PTPRO-201ENST00000281171 TPD52L1Q16890 204 aaPredicted RBP17.44■□□□□ 0.38
PTPRO-201ENST00000281171 ITPRIPQ8IWB1 547 aa17.44■□□□□ 0.38
PTPRO-201ENST00000281171 MCTP1Q6DN14 999 aa17.44■□□□□ 0.38
PTPRO-201ENST00000281171 DYNC1I1O14576 645 aa17.43■□□□□ 0.38
PTPRO-201ENST00000281171 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
PTPRO-201ENST00000281171 CCDC34Q96HJ3 373 aa17.43■□□□□ 0.38
PTPRO-201ENST00000281171 CAVIN1Q6NZI2 390 aaKnown RBP17.41■□□□□ 0.38
PTPRO-201ENST00000281171 SMAP1Q8IYB5 467 aaPredicted RBP17.41■□□□□ 0.38
PTPRO-201ENST00000281171 CCDC112Q8NEF3 446 aa17.41■□□□□ 0.38
PTPRO-201ENST00000281171 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
PTPRO-201ENST00000281171 BCL11BQ9C0K0 894 aaPredicted RBP17.41■□□□□ 0.38
PTPRO-201ENST00000281171 IGF1RP08069 1367 aa17.41■□□□□ 0.38
PTPRO-201ENST00000281171 CDR1P51861 262 aa17.4■□□□□ 0.38
PTPRO-201ENST00000281171 GTF2A1P52655 376 aaPredicted RBP17.4■□□□□ 0.38
PTPRO-201ENST00000281171 SAFB2Q14151 953 aaKnown RBP eCLIP17.4■□□□□ 0.38
PTPRO-201ENST00000281171 PLCD3Q8N3E9 789 aa17.4■□□□□ 0.38
PTPRO-201ENST00000281171 RUFY1Q96T51 708 aa17.4■□□□□ 0.38
PTPRO-201ENST00000281171 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
PTPRO-201ENST00000281171 CGNL1Q0VF96 1302 aa17.4■□□□□ 0.38
PTPRO-201ENST00000281171 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
PTPRO-201ENST00000281171 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
PTPRO-201ENST00000281171 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
PTPRO-201ENST00000281171 MBD3O95983 291 aa17.39■□□□□ 0.37
PTPRO-201ENST00000281171 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
PTPRO-201ENST00000281171 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.39■□□□□ 0.37
PTPRO-201ENST00000281171 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
PTPRO-201ENST00000281171 FOXD1Q16676 465 aa17.38■□□□□ 0.37
PTPRO-201ENST00000281171 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
PTPRO-201ENST00000281171 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
PTPRO-201ENST00000281171 C22orf23Q9BZE7 217 aa17.37■□□□□ 0.37
PTPRO-201ENST00000281171 KIAA0754O94854 1291 aa17.37■□□□□ 0.37
PTPRO-201ENST00000281171 NGDNQ8NEJ9 315 aaKnown RBP17.37■□□□□ 0.37
PTPRO-201ENST00000281171 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
PTPRO-201ENST00000281171 TAOK2Q9UL54 1235 aa17.37■□□□□ 0.37
PTPRO-201ENST00000281171 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
PTPRO-201ENST00000281171 MIA2Q96PC5 1412 aa17.36■□□□□ 0.37
PTPRO-201ENST00000281171 PLIN1O60240 522 aa17.36■□□□□ 0.37
PTPRO-201ENST00000281171 MCM4P33991 863 aa17.36■□□□□ 0.37
PTPRO-201ENST00000281171 NBPF1Q3BBV0 1214 aa17.36■□□□□ 0.37
PTPRO-201ENST00000281171 OSCARQ8IYS5 282 aa17.35■□□□□ 0.37
PTPRO-201ENST00000281171 PRKRIP1Q9H875 184 aaPredicted RBP17.35■□□□□ 0.37
PTPRO-201ENST00000281171 SMC4Q9NTJ3 1288 aa17.35■□□□□ 0.37
PTPRO-201ENST00000281171 RNF20Q5VTR2 975 aa17.35■□□□□ 0.37
PTPRO-201ENST00000281171 NOL8Q76FK4 1167 aaKnown RBP17.35■□□□□ 0.37
PTPRO-201ENST00000281171 CASKIN1Q8WXD9 1431 aa17.35■□□□□ 0.37
PTPRO-201ENST00000281171 TPM1P09493 284 aa17.34■□□□□ 0.37
PTPRO-201ENST00000281171 AAMPQ13685 434 aa17.34■□□□□ 0.37
PTPRO-201ENST00000281171 KIF21BO75037 1637 aa17.33■□□□□ 0.37
PTPRO-201ENST00000281171 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.37
PTPRO-201ENST00000281171 GRIN2BQ13224 1484 aa17.33■□□□□ 0.36
PTPRO-201ENST00000281171 NEFHP12036 1026 aa17.33■□□□□ 0.36
PTPRO-201ENST00000281171 PPP4R3BQ5MIZ7 849 aa17.33■□□□□ 0.36
PTPRO-201ENST00000281171 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.36
PTPRO-201ENST00000281171 AMPHP49418 695 aa17.32■□□□□ 0.36
PTPRO-201ENST00000281171 EFCAB5A4FU69 1503 aa17.32■□□□□ 0.36
PTPRO-201ENST00000281171 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
PTPRO-201ENST00000281171 CCP110O43303 1012 aa17.32■□□□□ 0.36
PTPRO-201ENST00000281171 TSR1Q2NL82 804 aaKnown RBP17.31■□□□□ 0.36
PTPRO-201ENST00000281171 SOX12O15370 315 aa17.31■□□□□ 0.36
PTPRO-201ENST00000281171 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
PTPRO-201ENST00000281171 CTR9Q6PD62 1173 aa17.31■□□□□ 0.36
PTPRO-201ENST00000281171 PLCD4Q9BRC7 762 aa17.31■□□□□ 0.36
PTPRO-201ENST00000281171 CLGNO14967 610 aa17.3■□□□□ 0.36
PTPRO-201ENST00000281171 KIF20AO95235 890 aa17.3■□□□□ 0.36
PTPRO-201ENST00000281171 MCM5P33992 734 aa17.3■□□□□ 0.36
PTPRO-201ENST00000281171 PLEKHH2Q8IVE3 1493 aa17.3■□□□□ 0.36
PTPRO-201ENST00000281171 SSR1P43307 286 aaKnown RBP17.29■□□□□ 0.36
PTPRO-201ENST00000281171 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
PTPRO-201ENST00000281171 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
PTPRO-201ENST00000281171 USP47Q96K76 1375 aa17.29■□□□□ 0.36
PTPRO-201ENST00000281171 APBB1O00213 710 aa17.29■□□□□ 0.36
PTPRO-201ENST00000281171 DYDC1Q8WWB3 177 aa17.29■□□□□ 0.36
PTPRO-201ENST00000281171 COG3Q96JB2 828 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms