RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 TMEM131LA2VDJ0 1609 aa20.38■□□□□ 0.85
TRIM23-202ENST00000274327 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
TRIM23-202ENST00000274327 CCDC7Q96M83 1385 aa20.37■□□□□ 0.85
TRIM23-202ENST00000274327 MYO5BQ9ULV0 1848 aa20.37■□□□□ 0.85
TRIM23-202ENST00000274327 C11orf95C9JLR9 678 aaPredicted RBP20.37■□□□□ 0.85
TRIM23-202ENST00000274327 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
TRIM23-202ENST00000274327 ARID4BQ4LE39 1312 aaPredicted RBP20.37■□□□□ 0.85
TRIM23-202ENST00000274327 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
TRIM23-202ENST00000274327 IQGAP1P46940 1657 aa20.36■□□□□ 0.85
TRIM23-202ENST00000274327 ADGRF5Q8IZF2 1346 aa20.36■□□□□ 0.85
TRIM23-202ENST00000274327 ZMYM3Q14202 1370 aa20.35■□□□□ 0.85
TRIM23-202ENST00000274327 ESF1Q9H501 851 aaKnown RBP20.33■□□□□ 0.85
TRIM23-202ENST00000274327 KIF7Q2M1P5 1343 aa20.32■□□□□ 0.84
TRIM23-202ENST00000274327 ST20-MTHFSA0A0A6YYL1 179 aa20.32■□□□□ 0.84
TRIM23-202ENST00000274327 PIK3C2GO75747 1445 aa20.32■□□□□ 0.84
TRIM23-202ENST00000274327 ZFYVE9O95405 1425 aa20.3■□□□□ 0.84
TRIM23-202ENST00000274327 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
TRIM23-202ENST00000274327 SCAF11Q99590 1463 aaKnown RBP20.29■□□□□ 0.84
TRIM23-202ENST00000274327 FER1L4A9Z1Z3 1794 aa20.28■□□□□ 0.84
TRIM23-202ENST00000274327 CFAP70Q5T0N1 1121 aa20.27■□□□□ 0.84
TRIM23-202ENST00000274327 A2ML1A8K2U0 1454 aa20.25■□□□□ 0.83
TRIM23-202ENST00000274327 VGFO15240 615 aaPredicted RBP20.25■□□□□ 0.83
TRIM23-202ENST00000274327 C3P01024 1663 aa20.25■□□□□ 0.83
TRIM23-202ENST00000274327 C14orf93Q9H972 538 aaKnown RBP20.24■□□□□ 0.83
TRIM23-202ENST00000274327 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
TRIM23-202ENST00000274327 TESK2Q96S53 571 aa20.23■□□□□ 0.83
TRIM23-202ENST00000274327 TNRQ92752 1358 aa20.23■□□□□ 0.83
TRIM23-202ENST00000274327 ADGRB1O14514 1584 aa20.23■□□□□ 0.83
TRIM23-202ENST00000274327 MYO3AQ8NEV4 1616 aa20.19■□□□□ 0.82
TRIM23-202ENST00000274327 EIF3AQ14152 1382 aaKnown RBP20.19■□□□□ 0.82
TRIM23-202ENST00000274327 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
TRIM23-202ENST00000274327 NUTM2DQ5VT03 806 aaPredicted RBP20.18■□□□□ 0.82
TRIM23-202ENST00000274327 UBR1Q8IWV7 1749 aa20.17■□□□□ 0.82
TRIM23-202ENST00000274327 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
TRIM23-202ENST00000274327 ANP32CO43423 234 aa20.17■□□□□ 0.82
TRIM23-202ENST00000274327 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
TRIM23-202ENST00000274327 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
TRIM23-202ENST00000274327 DISP3Q9P2K9 1392 aa20.15■□□□□ 0.82
TRIM23-202ENST00000274327 ADAMTSL3P82987 1691 aa20.14■□□□□ 0.82
TRIM23-202ENST00000274327 TMF1P82094 1093 aa20.13■□□□□ 0.81
TRIM23-202ENST00000274327 ASXL1Q8IXJ9 1541 aa20.13■□□□□ 0.81
TRIM23-202ENST00000274327 CEBPAP49715 358 aaPredicted RBP20.13■□□□□ 0.81
TRIM23-202ENST00000274327 RIMS1Q86UR5 1692 aaKnown RBP20.12■□□□□ 0.81
TRIM23-202ENST00000274327 POLR3GLQ9BT43 218 aa20.11■□□□□ 0.81
TRIM23-202ENST00000274327 ALKQ9UM73 1620 aa20.11■□□□□ 0.81
TRIM23-202ENST00000274327 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
TRIM23-202ENST00000274327 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
TRIM23-202ENST00000274327 ARHGEF28Q8N1W1 1705 aaKnown RBP20.1■□□□□ 0.81
TRIM23-202ENST00000274327 SBNO2Q9Y2G9 1366 aa20.1■□□□□ 0.81
TRIM23-202ENST00000274327 CCER2I3L3R5 266 aa20.09■□□□□ 0.81
TRIM23-202ENST00000274327 TMEM132EQ6IEE7 984 aa20.09■□□□□ 0.81
TRIM23-202ENST00000274327 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.09■□□□□ 0.81
TRIM23-202ENST00000274327 NRXN3Q9Y4C0 1643 aa20.08■□□□□ 0.8
TRIM23-202ENST00000274327 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.8
TRIM23-202ENST00000274327 SLC24A1O60721 1099 aa20.07■□□□□ 0.8
TRIM23-202ENST00000274327 TMEM2Q9UHN6 1383 aa20.07■□□□□ 0.8
TRIM23-202ENST00000274327 TRAK1Q9UPV9 953 aa20.06■□□□□ 0.8
TRIM23-202ENST00000274327 PTPRMP28827 1452 aa20.06■□□□□ 0.8
TRIM23-202ENST00000274327 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
TRIM23-202ENST00000274327 CDCA8Q53HL2 280 aa20.04■□□□□ 0.8
TRIM23-202ENST00000274327 HDGFP51858 240 aaKnown RBP20.04■□□□□ 0.8
TRIM23-202ENST00000274327 SLIT1O75093 1534 aa20.02■□□□□ 0.8
TRIM23-202ENST00000274327 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.8
TRIM23-202ENST00000274327 MYOM1P52179 1685 aa20.02■□□□□ 0.8
TRIM23-202ENST00000274327 YTHDC2Q9H6S0 1430 aaKnown RBP20.02■□□□□ 0.8
TRIM23-202ENST00000274327 ARHGAP23Q9P227 1491 aa20.02■□□□□ 0.8
TRIM23-202ENST00000274327 DLC1Q96QB1 1528 aa19.99■□□□□ 0.79
TRIM23-202ENST00000274327 CEP170BQ9Y4F5 1589 aaPredicted RBP19.98■□□□□ 0.79
TRIM23-202ENST00000274327 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
TRIM23-202ENST00000274327 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
TRIM23-202ENST00000274327 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
TRIM23-202ENST00000274327 LRPPRCP42704 1394 aaKnown RBP19.97■□□□□ 0.79
TRIM23-202ENST00000274327 PLEKHG1Q9ULL1 1385 aa19.97■□□□□ 0.79
TRIM23-202ENST00000274327 PER1O15534 1290 aaPredicted RBP19.96■□□□□ 0.79
TRIM23-202ENST00000274327 KNDC1Q76NI1 1749 aa19.95■□□□□ 0.78
TRIM23-202ENST00000274327 SETD1BQ9UPS6 1966 aaKnown RBP19.95■□□□□ 0.78
TRIM23-202ENST00000274327 LTKP29376 864 aa19.95■□□□□ 0.78
TRIM23-202ENST00000274327 YTHDC1Q96MU7 727 aaKnown RBP19.95■□□□□ 0.78
TRIM23-202ENST00000274327 TULP4Q9NRJ4 1543 aa19.94■□□□□ 0.78
TRIM23-202ENST00000274327 ADAMTS13Q76LX8 1427 aa19.94■□□□□ 0.78
TRIM23-202ENST00000274327 PANK3Q9H999 370 aa19.94■□□□□ 0.78
TRIM23-202ENST00000274327 STK26Q9P289 416 aa19.94■□□□□ 0.78
TRIM23-202ENST00000274327 ABCC11Q96J66 1382 aa19.93■□□□□ 0.78
TRIM23-202ENST00000274327 THEMISQ8N1K5 641 aaPredicted RBP19.93■□□□□ 0.78
TRIM23-202ENST00000274327 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
TRIM23-202ENST00000274327 MED14O60244 1454 aa19.92■□□□□ 0.78
TRIM23-202ENST00000274327 METP08581 1390 aa19.92■□□□□ 0.78
TRIM23-202ENST00000274327 KTN1Q86UP2 1357 aaKnown RBP19.92■□□□□ 0.78
TRIM23-202ENST00000274327 TXNDC2Q86VQ3 553 aa19.91■□□□□ 0.78
TRIM23-202ENST00000274327 EID1Q9Y6B2 187 aa19.9■□□□□ 0.78
TRIM23-202ENST00000274327 TECPR2O15040 1411 aa19.9■□□□□ 0.78
TRIM23-202ENST00000274327 PRAM1Q96QH2 718 aa19.89■□□□□ 0.77
TRIM23-202ENST00000274327 EVC2Q86UK5 1308 aa19.89■□□□□ 0.77
TRIM23-202ENST00000274327 CPS1P31327 1500 aa19.88■□□□□ 0.77
TRIM23-202ENST00000274327 RALBP1Q15311 655 aa19.87■□□□□ 0.77
TRIM23-202ENST00000274327 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
TRIM23-202ENST00000274327 DIP2AQ14689 1571 aa19.87■□□□□ 0.77
TRIM23-202ENST00000274327 PARD3Q8TEW0 1356 aa19.86■□□□□ 0.77
TRIM23-202ENST00000274327 POGKQ9P215 609 aa19.86■□□□□ 0.77
TRIM23-202ENST00000274327 CCDC184Q52MB2 194 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms