RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 ARHGAP23Q9P227 1491 aa24.85■■□□□ 1.57
SKP2-201ENST00000274254 ZFYVE9O95405 1425 aa24.84■■□□□ 1.57
SKP2-201ENST00000274254 PPLO60437 1756 aa24.83■■□□□ 1.57
SKP2-201ENST00000274254 RIMS2Q9UQ26 1411 aa24.82■■□□□ 1.56
SKP2-201ENST00000274254 DCAF11Q8TEB1 546 aa24.81■■□□□ 1.56
SKP2-201ENST00000274254 STAC3Q96MF2 364 aa24.81■■□□□ 1.56
SKP2-201ENST00000274254 MYOM2P54296 1465 aa24.8■■□□□ 1.56
SKP2-201ENST00000274254 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.77■■□□□ 1.56
SKP2-201ENST00000274254 HDGFP51858 240 aaKnown RBP24.76■■□□□ 1.55
SKP2-201ENST00000274254 VGFO15240 615 aaPredicted RBP24.76■■□□□ 1.55
SKP2-201ENST00000274254 KDM2AQ9Y2K7 1162 aa24.76■■□□□ 1.55
SKP2-201ENST00000274254 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
SKP2-201ENST00000274254 LTKP29376 864 aa24.75■■□□□ 1.55
SKP2-201ENST00000274254 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
SKP2-201ENST00000274254 ADGRF5Q8IZF2 1346 aa24.74■■□□□ 1.55
SKP2-201ENST00000274254 SCAF11Q99590 1463 aaKnown RBP24.74■■□□□ 1.55
SKP2-201ENST00000274254 PPP1R15AO75807 674 aaPredicted RBP24.73■■□□□ 1.55
SKP2-201ENST00000274254 TXNDC2Q86VQ3 553 aa24.73■■□□□ 1.55
SKP2-201ENST00000274254 EID1Q9Y6B2 187 aa24.73■■□□□ 1.55
SKP2-201ENST00000274254 HSPA2P54652 639 aa24.72■■□□□ 1.55
SKP2-201ENST00000274254 PRAG1Q86YV5 1406 aa24.72■■□□□ 1.55
SKP2-201ENST00000274254 ZEB1P37275 1124 aaPredicted RBP24.71■■□□□ 1.55
SKP2-201ENST00000274254 ANKLE2Q86XL3 938 aa24.71■■□□□ 1.55
SKP2-201ENST00000274254 PIK3C2GO75747 1445 aa24.7■■□□□ 1.54
SKP2-201ENST00000274254 PLEKHG1Q9ULL1 1385 aa24.68■■□□□ 1.54
SKP2-201ENST00000274254 POLR1AO95602 1720 aaPredicted RBP24.68■■□□□ 1.54
SKP2-201ENST00000274254 NBPF8Q3BBV2 869 aa24.67■■□□□ 1.54
SKP2-201ENST00000274254 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
SKP2-201ENST00000274254 MED14O60244 1454 aa24.66■■□□□ 1.54
SKP2-201ENST00000274254 SETBP1Q9Y6X0 1596 aa24.66■■□□□ 1.54
SKP2-201ENST00000274254 NRXN3Q9Y4C0 1643 aa24.65■■□□□ 1.54
SKP2-201ENST00000274254 NCKAP5LQ9HCH0 1330 aa24.63■■□□□ 1.53
SKP2-201ENST00000274254 STRCQ7RTU9 1775 aa24.62■■□□□ 1.53
SKP2-201ENST00000274254 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
SKP2-201ENST00000274254 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
SKP2-201ENST00000274254 NPHP4O75161 1426 aaPredicted RBP24.6■■□□□ 1.53
SKP2-201ENST00000274254 ADAMTS13Q76LX8 1427 aa24.6■■□□□ 1.53
SKP2-201ENST00000274254 IQGAP1P46940 1657 aa24.6■■□□□ 1.53
SKP2-201ENST00000274254 TRPM1Q7Z4N2 1603 aa24.6■■□□□ 1.53
SKP2-201ENST00000274254 ALKQ9UM73 1620 aa24.59■■□□□ 1.53
SKP2-201ENST00000274254 LAMC1P11047 1609 aa24.59■■□□□ 1.53
SKP2-201ENST00000274254 CFAP70Q5T0N1 1121 aa24.58■■□□□ 1.53
SKP2-201ENST00000274254 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.53
SKP2-201ENST00000274254 RALGAPBQ86X10 1494 aa24.58■■□□□ 1.53
SKP2-201ENST00000274254 SETD1AO15047 1707 aaKnown RBP24.58■■□□□ 1.52
SKP2-201ENST00000274254 DIP2AQ14689 1571 aa24.55■■□□□ 1.52
SKP2-201ENST00000274254 BCANQ96GW7 911 aa24.55■■□□□ 1.52
SKP2-201ENST00000274254 TBX22Q9Y458 520 aa24.54■■□□□ 1.52
SKP2-201ENST00000274254 NBPF1Q3BBV0 1214 aa24.53■■□□□ 1.52
SKP2-201ENST00000274254 SLC26A8Q96RN1 970 aa24.53■■□□□ 1.52
SKP2-201ENST00000274254 ADGRB1O14514 1584 aa24.53■■□□□ 1.52
SKP2-201ENST00000274254 GPRASP1Q5JY77 1395 aa24.52■■□□□ 1.52
SKP2-201ENST00000274254 ASXL1Q8IXJ9 1541 aa24.52■■□□□ 1.52
SKP2-201ENST00000274254 ROCK2O75116 1388 aaKnown RBP24.51■■□□□ 1.51
SKP2-201ENST00000274254 METP08581 1390 aa24.5■■□□□ 1.51
SKP2-201ENST00000274254 TMEM132EQ6IEE7 984 aa24.47■■□□□ 1.51
SKP2-201ENST00000274254 PIK3R4Q99570 1358 aa24.47■■□□□ 1.51
SKP2-201ENST00000274254 DMRT2Q9Y5R5 561 aa24.45■■□□□ 1.51
SKP2-201ENST00000274254 CARD11Q9BXL7 1154 aa24.44■■□□□ 1.5
SKP2-201ENST00000274254 YTHDC2Q9H6S0 1430 aaKnown RBP24.43■■□□□ 1.5
SKP2-201ENST00000274254 PTPRUQ92729 1446 aa24.42■■□□□ 1.5
SKP2-201ENST00000274254 LRPPRCP42704 1394 aaKnown RBP24.42■■□□□ 1.5
SKP2-201ENST00000274254 CHD2O14647 1828 aaKnown RBP24.4■■□□□ 1.5
SKP2-201ENST00000274254 ABCC11Q96J66 1382 aa24.4■■□□□ 1.5
SKP2-201ENST00000274254 TECPR2O15040 1411 aa24.39■■□□□ 1.49
SKP2-201ENST00000274254 XRN1Q8IZH2 1706 aaKnown RBP24.38■■□□□ 1.49
SKP2-201ENST00000274254 KNDC1Q76NI1 1749 aa24.37■■□□□ 1.49
SKP2-201ENST00000274254 NWD1Q149M9 1564 aa24.37■■□□□ 1.49
SKP2-201ENST00000274254 STK26Q9P289 416 aa24.36■■□□□ 1.49
SKP2-201ENST00000274254 AMOTL2Q9Y2J4 779 aa24.36■■□□□ 1.49
SKP2-201ENST00000274254 KCNA6P17658 529 aa24.35■■□□□ 1.49
SKP2-201ENST00000274254 TRAK1Q9UPV9 953 aa24.35■■□□□ 1.49
SKP2-201ENST00000274254 DLC1Q96QB1 1528 aa24.35■■□□□ 1.49
SKP2-201ENST00000274254 USP47Q96K76 1375 aa24.35■■□□□ 1.49
SKP2-201ENST00000274254 CPS1P31327 1500 aa24.34■■□□□ 1.49
SKP2-201ENST00000274254 ARHGEF28Q8N1W1 1705 aaKnown RBP24.34■■□□□ 1.49
SKP2-201ENST00000274254 PTCH1Q13635 1447 aa24.33■■□□□ 1.48
SKP2-201ENST00000274254 SIRT1Q96EB6 747 aa24.32■■□□□ 1.48
SKP2-201ENST00000274254 STRCP1A6NGW2 1772 aa24.31■■□□□ 1.48
SKP2-201ENST00000274254 EIF3AQ14152 1382 aaKnown RBP24.3■■□□□ 1.48
SKP2-201ENST00000274254 FAM135BQ49AJ0 1406 aa24.3■■□□□ 1.48
SKP2-201ENST00000274254 ROBO2Q9HCK4 1378 aa24.3■■□□□ 1.48
SKP2-201ENST00000274254 EIF4G2P78344 907 aaKnown RBP eCLIP24.3■■□□□ 1.48
SKP2-201ENST00000274254 NKTRP30414 1462 aaKnown RBP24.29■■□□□ 1.48
SKP2-201ENST00000274254 ZNF335Q9H4Z2 1342 aaPredicted RBP24.28■■□□□ 1.48
SKP2-201ENST00000274254 HSPA5P11021 654 aaKnown RBP24.26■■□□□ 1.47
SKP2-201ENST00000274254 PRAM1Q96QH2 718 aa24.26■■□□□ 1.47
SKP2-201ENST00000274254 ST20-MTHFSA0A0A6YYL1 179 aa24.25■■□□□ 1.47
SKP2-201ENST00000274254 PLEKHH1Q9ULM0 1364 aa24.25■■□□□ 1.47
SKP2-201ENST00000274254 CENPJQ9HC77 1338 aaPredicted RBP24.25■■□□□ 1.47
SKP2-201ENST00000274254 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
SKP2-201ENST00000274254 POGKQ9P215 609 aa24.22■■□□□ 1.47
SKP2-201ENST00000274254 SBNO2Q9Y2G9 1366 aa24.22■■□□□ 1.47
SKP2-201ENST00000274254 QRICH2Q9H0J4 1663 aa24.21■■□□□ 1.47
SKP2-201ENST00000274254 TESK2Q96S53 571 aa24.2■■□□□ 1.47
SKP2-201ENST00000274254 SAFB2Q14151 953 aaKnown RBP eCLIP24.19■■□□□ 1.46
SKP2-201ENST00000274254 LTBP4Q8N2S1 1624 aa24.19■■□□□ 1.46
SKP2-201ENST00000274254 PROSER2Q86WR7 435 aaPredicted RBP24.18■■□□□ 1.46
SKP2-201ENST00000274254 HIRIP3Q9BW71 556 aaPredicted RBP24.18■■□□□ 1.46
SKP2-201ENST00000274254 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms