RNA–Protein interactions for RNA: ENST00000271277.10

CTTNBP2NL-201, Transcript of CTTNBP2 N-terminal like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTTNBP2NL, Length 5,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NL-201ENST00000271277 SIPA1L3O60292 1781 aaPredicted RBP9.38□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 DIEXFQ68CQ4 756 aaKnown RBP9.38□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 BLMP54132 1417 aaPredicted RBP9.38□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 CHD2O14647 1828 aaKnown RBP9.38□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 CCER1Q8TC90 406 aaPredicted RBP9.38□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 CCDC144AA2RUR9 1427 aa9.37□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 PARD3Q8TEW0 1356 aa9.37□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 FOXD1Q16676 465 aa9.36□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 ADGRL1O94910 1474 aa9.36□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 YEATS2Q9ULM3 1422 aa9.36□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 L3MBTL2Q969R5 705 aa9.36□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 INSRP06213 1382 aa9.36□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 LMO7Q8WWI1 1683 aa9.35□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 DISP3Q9P2K9 1392 aa9.34□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 GLI3P10071 1580 aa9.34□□□□□ -0.91
CTTNBP2NL-201ENST00000271277 DLC1Q96QB1 1528 aa9.33□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 ALKQ9UM73 1620 aa9.33□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 KIF7Q2M1P5 1343 aa9.33□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 TRPM3Q9HCF6 1732 aaPredicted RBP9.33□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 RANGAP1P46060 587 aaPredicted RBP9.33□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 ANKRD30AQ9BXX3 1397 aa9.33□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 SBNO2Q9Y2G9 1366 aa9.31□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 PIK3C2AO00443 1686 aa9.31□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 MAP2P11137 1827 aaKnown RBP9.31□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 CEP170BQ9Y4F5 1589 aaPredicted RBP9.31□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 SHANK3Q9BYB0 1731 aa9.3□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 CHMP7Q8WUX9 453 aaPredicted RBP9.3□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 NUP155O75694 1391 aa9.3□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 LRRC7Q96NW7 1537 aa9.29□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 RRP7BPQ9NSQ0 103 aa9.28□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 SLIT1O75093 1534 aa9.28□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 NWD1Q149M9 1564 aa9.28□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 ITSN1Q15811 1721 aa9.27□□□□□ -0.92
CTTNBP2NL-201ENST00000271277 HNRNPMP52272 730 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 ARHGAP23Q9P227 1491 aa9.27□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 ZNF521Q96K83 1311 aa9.26□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 ABCA3Q99758 1704 aa9.26□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 RGPD2P0DJD1 1756 aa9.25□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 TECPR2O15040 1411 aa9.25□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 MYT1Q01538 1121 aa9.25□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 A2ML1A8K2U0 1454 aa9.24□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 SMG6Q86US8 1419 aaKnown RBP9.24□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 COL18A1P39060 1754 aa9.24□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 HSPA5P11021 654 aaKnown RBP9.23□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 STRCQ7RTU9 1775 aa9.23□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 USP47Q96K76 1375 aa9.23□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.23□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 CASZ1Q86V15 1759 aa9.22□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 ALS2Q96Q42 1657 aa9.22□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 NPC1L1Q9UHC9 1359 aa9.21□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 SCAF11Q99590 1463 aaKnown RBP9.21□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 DIP2AQ14689 1571 aa9.21□□□□□ -0.93
CTTNBP2NL-201ENST00000271277 ARID4BQ4LE39 1312 aaPredicted RBP9.21□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 CCER2I3L3R5 266 aa9.21□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 SSH2Q76I76 1423 aa9.2□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 MED1Q15648 1581 aaPredicted RBP9.19□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 FAM50AQ14320 339 aaKnown RBP9.19□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 CD109Q6YHK3 1445 aa9.19□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 PELP1Q8IZL8 1130 aaKnown RBP9.19□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 CFDP1Q9UEE9 299 aaPredicted RBP9.18□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 LTN1O94822 1766 aa9.18□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 RSPH4AQ5TD94 716 aa9.18□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 FAM208AQ9UK61 1670 aaKnown RBP9.18□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 CHIC2Q9UKJ5 165 aa9.18□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 WNK3Q9BYP7 1800 aa9.17□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 NBPF1Q3BBV0 1214 aa9.17□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 KDM3BQ7LBC6 1761 aa9.17□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 RGPD5Q99666 1765 aa9.16□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 NKTRP30414 1462 aaKnown RBP9.16□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 AFAP1Q8N556 730 aa9.16□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 PRKRIP1Q9H875 184 aaPredicted RBP9.16□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 PHF23Q9BUL5 403 aaPredicted RBP9.16□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 EP400Q96L91 3159 aa9.15□□□□□ -0.94
CTTNBP2NL-201ENST00000271277 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 PKD2Q13563 968 aa9.14□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 PAPPAQ13219 1627 aa9.14□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 TRMT2AQ8IZ69 625 aaKnown RBP9.14□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 HIRIP3Q9BW71 556 aaPredicted RBP9.14□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 DDX60Q8IY21 1712 aaKnown RBP9.13□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 CPSF1Q10570 1443 aaKnown RBP9.12□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 NHSL1Q5SYE7 1610 aa9.12□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 PTPRUQ92729 1446 aa9.12□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 PNISRQ8TF01 805 aaKnown RBP9.11□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 MST1RQ04912 1400 aa9.1□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 ATP7BP35670 1465 aa9.1□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 SUPT16HQ9Y5B9 1047 aaKnown RBP9.1□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 UBR2Q8IWV8 1755 aa9.1□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 ARID3CA6NKF2 412 aa9.09□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 CARD14Q9BXL6 1004 aa9.09□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 PNPLA6Q8IY17 1366 aa9.09□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 ADGRF5Q8IZF2 1346 aa9.09□□□□□ -0.95
CTTNBP2NL-201ENST00000271277 NCAPD2Q15021 1401 aa9.08□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 YTHDC2Q9H6S0 1430 aaKnown RBP9.08□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 PLEKHD1A6NEE1 506 aa9.08□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 TONSLQ96HA7 1378 aa9.07□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 ITGAEP38570 1179 aa9.07□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 KTN1Q86UP2 1357 aaKnown RBP9.07□□□□□ -0.96
CTTNBP2NL-201ENST00000271277 PARP4Q9UKK3 1724 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms