RNA–Protein interactions for RNA: ENST00000269080.6

ABCA8-201, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best) BASIC

Gene ABCA8, Length 5,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-201ENST00000269080 ST18O60284 1047 aa12.78□□□□□ -0.36
ABCA8-201ENST00000269080 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
ABCA8-201ENST00000269080 GIMAP7Q8NHV1 300 aa12.78□□□□□ -0.36
ABCA8-201ENST00000269080 AMPHP49418 695 aa12.78□□□□□ -0.36
ABCA8-201ENST00000269080 BRPF3Q9ULD4 1205 aa12.78□□□□□ -0.36
ABCA8-201ENST00000269080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.36
ABCA8-201ENST00000269080 AXDND1Q5T1B0 1012 aaPredicted RBP12.77□□□□□ -0.37
ABCA8-201ENST00000269080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.77□□□□□ -0.37
ABCA8-201ENST00000269080 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
ABCA8-201ENST00000269080 HNRNPMP52272 730 aaKnown RBP eCLIP12.77□□□□□ -0.37
ABCA8-201ENST00000269080 KIAA0754O94854 1291 aa12.77□□□□□ -0.37
ABCA8-201ENST00000269080 RAPGEF2Q9Y4G8 1499 aa12.76□□□□□ -0.37
ABCA8-201ENST00000269080 MSH5O43196 834 aa12.76□□□□□ -0.37
ABCA8-201ENST00000269080 DIAPH3Q9NSV4 1193 aa12.76□□□□□ -0.37
ABCA8-201ENST00000269080 ERCC4Q92889 916 aaPredicted RBP12.76□□□□□ -0.37
ABCA8-201ENST00000269080 UACAQ9BZF9 1416 aa12.76□□□□□ -0.37
ABCA8-201ENST00000269080 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
ABCA8-201ENST00000269080 GOLGA6L7A0A1B0GV03 622 aa12.75□□□□□ -0.37
ABCA8-201ENST00000269080 SETD5Q9C0A6 1442 aa12.74□□□□□ -0.37
ABCA8-201ENST00000269080 CAGE1Q8TC20 777 aa12.74□□□□□ -0.37
ABCA8-201ENST00000269080 STK31Q9BXU1 1019 aa12.74□□□□□ -0.37
ABCA8-201ENST00000269080 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
ABCA8-201ENST00000269080 IPO8O15397 1037 aaKnown RBP12.74□□□□□ -0.37
ABCA8-201ENST00000269080 USP8P40818 1118 aa12.74□□□□□ -0.37
ABCA8-201ENST00000269080 GORABQ5T7V8 394 aa12.74□□□□□ -0.37
ABCA8-201ENST00000269080 ANKRD20A12PQ8NF67 263 aa12.74□□□□□ -0.37
ABCA8-201ENST00000269080 NFKBIBQ15653 356 aa12.73□□□□□ -0.37
ABCA8-201ENST00000269080 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
ABCA8-201ENST00000269080 CLASRPQ8N2M8 674 aaKnown RBP12.73□□□□□ -0.37
ABCA8-201ENST00000269080 CENPHQ9H3R5 247 aa12.73□□□□□ -0.37
ABCA8-201ENST00000269080 CHMP3Q9Y3E7 222 aa12.73□□□□□ -0.37
ABCA8-201ENST00000269080 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
ABCA8-201ENST00000269080 CT47A1Q5JQC4 288 aaPredicted RBP12.73□□□□□ -0.37
ABCA8-201ENST00000269080 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
ABCA8-201ENST00000269080 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
ABCA8-201ENST00000269080 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
ABCA8-201ENST00000269080 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
ABCA8-201ENST00000269080 HSP90AB2PQ58FF8 381 aa12.72□□□□□ -0.37
ABCA8-201ENST00000269080 IBSPP21815 317 aaPredicted RBP12.72□□□□□ -0.37
ABCA8-201ENST00000269080 FAM184AQ8NB25 1140 aa12.72□□□□□ -0.37
ABCA8-201ENST00000269080 ATF3P18847 181 aa12.72□□□□□ -0.37
ABCA8-201ENST00000269080 ATP6V1DQ9Y5K8 247 aa12.72□□□□□ -0.37
ABCA8-201ENST00000269080 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.37
ABCA8-201ENST00000269080 LMOD3Q0VAK6 560 aa12.71□□□□□ -0.37
ABCA8-201ENST00000269080 GPATCH11Q8N954 259 aa12.71□□□□□ -0.37
ABCA8-201ENST00000269080 UBE2Q2Q8WVN8 375 aa12.71□□□□□ -0.37
ABCA8-201ENST00000269080 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
ABCA8-201ENST00000269080 GPATCH3Q96I76 525 aa12.71□□□□□ -0.37
ABCA8-201ENST00000269080 MCTP1Q6DN14 999 aa12.71□□□□□ -0.38
ABCA8-201ENST00000269080 CCAR1Q8IX12 1150 aaKnown RBP12.71□□□□□ -0.38
ABCA8-201ENST00000269080 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.38
ABCA8-201ENST00000269080 ODF2Q5BJF6 829 aa12.71□□□□□ -0.38
ABCA8-201ENST00000269080 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
ABCA8-201ENST00000269080 ERICH4A6NGS2 130 aa12.7□□□□□ -0.38
ABCA8-201ENST00000269080 TICAM2Q86XR7 235 aa12.7□□□□□ -0.38
ABCA8-201ENST00000269080 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
ABCA8-201ENST00000269080 ANKRD62A6NC57 917 aa12.7□□□□□ -0.38
ABCA8-201ENST00000269080 TTLL5Q6EMB2 1281 aa12.7□□□□□ -0.38
ABCA8-201ENST00000269080 U2AF1L5P0DN76 240 aaPredicted RBP12.7□□□□□ -0.38
ABCA8-201ENST00000269080 U2AF1Q01081 240 aaKnown RBP eCLIP12.7□□□□□ -0.38
ABCA8-201ENST00000269080 TNNT1P13805 278 aa12.69□□□□□ -0.38
ABCA8-201ENST00000269080 ZFYVE27Q5T4F4 411 aa12.68□□□□□ -0.38
ABCA8-201ENST00000269080 ZBED9Q6R2W3 1325 aa12.68□□□□□ -0.38
ABCA8-201ENST00000269080 C1orf141Q5JVX7 400 aa12.68□□□□□ -0.38
ABCA8-201ENST00000269080 ENOX2Q16206 610 aaKnown RBP12.68□□□□□ -0.38
ABCA8-201ENST00000269080 NUTM2DQ5VT03 806 aaPredicted RBP12.68□□□□□ -0.38
ABCA8-201ENST00000269080 EXOC6Q8TAG9 804 aa12.68□□□□□ -0.38
ABCA8-201ENST00000269080 IPO4Q8TEX9 1081 aaKnown RBP12.68□□□□□ -0.38
ABCA8-201ENST00000269080 RAB3GAP2Q9H2M9 1393 aa12.67□□□□□ -0.38
ABCA8-201ENST00000269080 FRAT2O75474 233 aaPredicted RBP12.67□□□□□ -0.38
ABCA8-201ENST00000269080 NF2P35240 595 aa12.67□□□□□ -0.38
ABCA8-201ENST00000269080 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
ABCA8-201ENST00000269080 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
ABCA8-201ENST00000269080 PDE3BQ13370 1112 aa12.66□□□□□ -0.38
ABCA8-201ENST00000269080 SF3B2Q13435 895 aaKnown RBP12.66□□□□□ -0.38
ABCA8-201ENST00000269080 LTV1Q96GA3 475 aaPredicted RBP12.66□□□□□ -0.38
ABCA8-201ENST00000269080 CCDC39Q9UFE4 941 aa12.66□□□□□ -0.38
ABCA8-201ENST00000269080 VPS8Q8N3P4 1428 aa12.66□□□□□ -0.38
ABCA8-201ENST00000269080 MYO6Q9UM54 1294 aa12.66□□□□□ -0.38
ABCA8-201ENST00000269080 RALBP1Q15311 655 aa12.66□□□□□ -0.38
ABCA8-201ENST00000269080 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
ABCA8-201ENST00000269080 CCDC47Q96A33 483 aaKnown RBP12.66□□□□□ -0.38
ABCA8-201ENST00000269080 MPHOSPH9Q99550 1183 aa12.66□□□□□ -0.38
ABCA8-201ENST00000269080 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
ABCA8-201ENST00000269080 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
ABCA8-201ENST00000269080 PSME1Q06323 249 aa12.65□□□□□ -0.38
ABCA8-201ENST00000269080 PDILTQ8N807 584 aa12.65□□□□□ -0.38
ABCA8-201ENST00000269080 CLGNO14967 610 aa12.64□□□□□ -0.39
ABCA8-201ENST00000269080 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
ABCA8-201ENST00000269080 SASS6Q6UVJ0 657 aa12.64□□□□□ -0.39
ABCA8-201ENST00000269080 RRP9O43818 475 aaKnown RBP12.64□□□□□ -0.39
ABCA8-201ENST00000269080 COG3Q96JB2 828 aa12.63□□□□□ -0.39
ABCA8-201ENST00000269080 DHX57Q6P158 1386 aaKnown RBP12.63□□□□□ -0.39
ABCA8-201ENST00000269080 GOLGA6L10A6NI86 522 aa12.63□□□□□ -0.39
ABCA8-201ENST00000269080 TAX1BP1Q86VP1 789 aa12.62□□□□□ -0.39
ABCA8-201ENST00000269080 TCEAL9Q9UHQ7 104 aa12.62□□□□□ -0.39
ABCA8-201ENST00000269080 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
ABCA8-201ENST00000269080 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
ABCA8-201ENST00000269080 SEPT7Q16181 437 aaKnown RBP12.62□□□□□ -0.39
ABCA8-201ENST00000269080 OFD1O75665 1012 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms