RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 L3MBTL2Q969R5 705 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 ARGLU1Q9NWB6 273 aaPredicted RBP6.95□□□□□ -1.3
VCAN-201ENST00000265077 CHMP5Q9NZZ3 219 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 DDX49Q9Y6V7 483 aaKnown RBP6.95□□□□□ -1.3
VCAN-201ENST00000265077 WASHC2CQ9Y4E1 1318 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 TRIM6-TRIM34B2RNG4 842 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 USP8P40818 1118 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 FAM193AP78312 1265 aa6.95□□□□□ -1.3
VCAN-201ENST00000265077 USP47Q96K76 1375 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 GON4LQ3T8J9 2241 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 PDS5BQ9NTI5 1447 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 ERICH4A6NGS2 130 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 PDCL2Q8N4E4 241 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 CCDC144AA2RUR9 1427 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 PLCD4Q9BRC7 762 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 CTR9Q6PD62 1173 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 ZKSCAN2Q63HK3 967 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 GPATCH11Q8N954 259 aa6.94□□□□□ -1.3
VCAN-201ENST00000265077 SASS6Q6UVJ0 657 aa6.93□□□□□ -1.3
VCAN-201ENST00000265077 TRAK2O60296 914 aa6.93□□□□□ -1.3
VCAN-201ENST00000265077 CCDC94Q9BW85 323 aaPredicted RBP6.93□□□□□ -1.3
VCAN-201ENST00000265077 ROCK1Q13464 1354 aa6.93□□□□□ -1.3
VCAN-201ENST00000265077 NBPF1Q3BBV0 1214 aa6.93□□□□□ -1.3
VCAN-201ENST00000265077 CBX1P83916 185 aa6.93□□□□□ -1.3
VCAN-201ENST00000265077 CFAP65Q6ZU64 1925 aaKnown RBP6.93□□□□□ -1.3
VCAN-201ENST00000265077 APBB1O00213 710 aa6.93□□□□□ -1.3
VCAN-201ENST00000265077 NPHP1O15259 732 aa6.93□□□□□ -1.3
VCAN-201ENST00000265077 PRKRIP1Q9H875 184 aaPredicted RBP6.93□□□□□ -1.3
VCAN-201ENST00000265077 GOLGA4Q13439 2230 aaKnown RBP6.93□□□□□ -1.3
VCAN-201ENST00000265077 AK7Q96M32 723 aa6.93□□□□□ -1.3
VCAN-201ENST00000265077 REC8O95072 547 aa6.92□□□□□ -1.3
VCAN-201ENST00000265077 SENP3Q9H4L4 574 aaPredicted RBP6.92□□□□□ -1.3
VCAN-201ENST00000265077 TPM3P06753 285 aa6.92□□□□□ -1.3
VCAN-201ENST00000265077 GOLGA6L19H0YKK7 550 aa6.92□□□□□ -1.3
VCAN-201ENST00000265077 NUCB2P80303 420 aa6.92□□□□□ -1.3
VCAN-201ENST00000265077 SUPT6HQ7KZ85 1726 aaKnown RBP6.92□□□□□ -1.3
VCAN-201ENST00000265077 LEKR1Q6ZMV7 388 aa6.92□□□□□ -1.3
VCAN-201ENST00000265077 ERICH3Q5RHP9 1530 aa6.91□□□□□ -1.3
VCAN-201ENST00000265077 CNTLNQ9NXG0 1405 aa6.91□□□□□ -1.3
VCAN-201ENST00000265077 TAOK2Q9UL54 1235 aa6.91□□□□□ -1.3
VCAN-201ENST00000265077 FHOD3Q2V2M9 1422 aa6.9□□□□□ -1.3
VCAN-201ENST00000265077 TPM1P09493 284 aa6.9□□□□□ -1.3
VCAN-201ENST00000265077 GIMAP7Q8NHV1 300 aa6.9□□□□□ -1.3
VCAN-201ENST00000265077 MIA2Q96PC5 1412 aa6.9□□□□□ -1.3
VCAN-201ENST00000265077 BACH2Q9BYV9 841 aa6.9□□□□□ -1.3
VCAN-201ENST00000265077 ST20-MTHFSA0A0A6YYL1 179 aa6.9□□□□□ -1.3
VCAN-201ENST00000265077 STK11IPQ8N1F8 1099 aa6.9□□□□□ -1.31
VCAN-201ENST00000265077 ZNF592Q92610 1267 aa6.9□□□□□ -1.31
VCAN-201ENST00000265077 CCDC146Q8IYE0 955 aa6.9□□□□□ -1.31
VCAN-201ENST00000265077 DDX19BQ9UMR2 479 aa6.9□□□□□ -1.31
VCAN-201ENST00000265077 HSP90AB3PQ58FF7 597 aa6.9□□□□□ -1.31
VCAN-201ENST00000265077 CCDC70Q6NSX1 233 aa6.9□□□□□ -1.31
VCAN-201ENST00000265077 SF3A1Q15459 793 aaKnown RBP6.89□□□□□ -1.31
VCAN-201ENST00000265077 CRBNQ96SW2 442 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 PANK3Q9H999 370 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 NEFHP12036 1026 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 MNS1Q8NEH6 495 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 ZNF622Q969S3 477 aaKnown RBP eCLIP6.89□□□□□ -1.31
VCAN-201ENST00000265077 H3BQV1 296 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 IFFO2Q5TF58 517 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 BECN2A8MW95 431 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 LMOD2Q6P5Q4 547 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 RBM28Q9NW13 759 aaKnown RBP6.89□□□□□ -1.31
VCAN-201ENST00000265077 H0YHG0 523 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 TDO2P48775 406 aa6.89□□□□□ -1.31
VCAN-201ENST00000265077 RUFY2Q8WXA3 655 aa6.88□□□□□ -1.31
VCAN-201ENST00000265077 TNNT1P13805 278 aa6.88□□□□□ -1.31
VCAN-201ENST00000265077 EFCAB2Q5VUJ9 269 aa6.88□□□□□ -1.31
VCAN-201ENST00000265077 BRD4O60885 1362 aaPredicted RBP6.88□□□□□ -1.31
VCAN-201ENST00000265077 LRRFIP1Q32MZ4 808 aaKnown RBP6.88□□□□□ -1.31
VCAN-201ENST00000265077 TSR1Q2NL82 804 aaKnown RBP6.88□□□□□ -1.31
VCAN-201ENST00000265077 ACBD3Q9H3P7 528 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 EXOC6Q8TAG9 804 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 CCDC7Q96M83 1385 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 TRIM34Q9BYJ4 488 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 MYOM3Q5VTT5 1437 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 ZKSCAN1P17029 563 aaPredicted RBP6.87□□□□□ -1.31
VCAN-201ENST00000265077 CNPY4Q8N129 248 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 CLUAP1Q96AJ1 413 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 MCM5P33992 734 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 STAC3Q96MF2 364 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 STK26Q9P289 416 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 HOOK1Q9UJC3 728 aaKnown RBP6.87□□□□□ -1.31
VCAN-201ENST00000265077 ANKRD45Q5TZF3 282 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 HSP90B2PQ58FF3 399 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 FAM184AQ8NB25 1140 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 IFT57Q9NWB7 429 aa6.87□□□□□ -1.31
VCAN-201ENST00000265077 SAFB2Q14151 953 aaKnown RBP eCLIP6.86□□□□□ -1.31
VCAN-201ENST00000265077 MBD3O95983 291 aa6.86□□□□□ -1.31
VCAN-201ENST00000265077 SETD1BQ9UPS6 1966 aaKnown RBP6.86□□□□□ -1.31
VCAN-201ENST00000265077 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
VCAN-201ENST00000265077 EVC2Q86UK5 1308 aa6.86□□□□□ -1.31
VCAN-201ENST00000265077 ZFP91Q96JP5 570 aaPredicted RBP6.86□□□□□ -1.31
VCAN-201ENST00000265077 PSMD1Q99460 953 aa6.86□□□□□ -1.31
VCAN-201ENST00000265077 NINLQ9Y2I6 1382 aa6.86□□□□□ -1.31
VCAN-201ENST00000265077 PAIP2Q9BPZ3 127 aaKnown RBP6.86□□□□□ -1.31
VCAN-201ENST00000265077 FOXD4L1Q9NU39 408 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms