RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
USP13-201ENST00000263966 NUTM2FA1L443 756 aa20.1■□□□□ 0.81
USP13-201ENST00000263966 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
USP13-201ENST00000263966 RCAN3Q9UKA8 241 aa20.1■□□□□ 0.81
USP13-201ENST00000263966 PKD2Q13563 968 aa20.1■□□□□ 0.81
USP13-201ENST00000263966 NUP155O75694 1391 aa20.09■□□□□ 0.81
USP13-201ENST00000263966 CUX2O14529 1486 aa20.08■□□□□ 0.81
USP13-201ENST00000263966 WDHD1O75717 1129 aaPredicted RBP20.08■□□□□ 0.81
USP13-201ENST00000263966 SLC3A2P08195 630 aaKnown RBP20.08■□□□□ 0.81
USP13-201ENST00000263966 CCDC18Q5T9S5 1454 aa20.07■□□□□ 0.8
USP13-201ENST00000263966 OFD1O75665 1012 aa20.07■□□□□ 0.8
USP13-201ENST00000263966 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
USP13-201ENST00000263966 CENPJQ9HC77 1338 aaPredicted RBP20.06■□□□□ 0.8
USP13-201ENST00000263966 GOLGA6L3A6NEY3 463 aa20.06■□□□□ 0.8
USP13-201ENST00000263966 IFIT2P09913 472 aaKnown RBP20.05■□□□□ 0.8
USP13-201ENST00000263966 SYCP1Q15431 976 aa20.05■□□□□ 0.8
USP13-201ENST00000263966 FMN1Q68DA7 1419 aa20.04■□□□□ 0.8
USP13-201ENST00000263966 DDX11L8A8MPP1 907 aa20.04■□□□□ 0.8
USP13-201ENST00000263966 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
USP13-201ENST00000263966 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
USP13-201ENST00000263966 DESP17661 470 aa20.04■□□□□ 0.8
USP13-201ENST00000263966 SLKQ9H2G2 1235 aaPredicted RBP20.04■□□□□ 0.8
USP13-201ENST00000263966 CARMIL1Q5VZK9 1371 aa20.04■□□□□ 0.8
USP13-201ENST00000263966 ARID3AQ99856 593 aa20.03■□□□□ 0.8
USP13-201ENST00000263966 EVC2Q86UK5 1308 aa20.03■□□□□ 0.8
USP13-201ENST00000263966 TIMELESSQ9UNS1 1208 aa20.03■□□□□ 0.8
USP13-201ENST00000263966 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
USP13-201ENST00000263966 DNAI2Q9GZS0 605 aa20.03■□□□□ 0.8
USP13-201ENST00000263966 TEX35Q5T0J7 233 aa20.02■□□□□ 0.8
USP13-201ENST00000263966 G3BP1Q13283 466 aaKnown RBP eCLIP20.01■□□□□ 0.79
USP13-201ENST00000263966 RALYLQ86SE5 291 aaKnown RBP20.01■□□□□ 0.79
USP13-201ENST00000263966 ANKRD18AQ8IVF6 992 aa20■□□□□ 0.79
USP13-201ENST00000263966 ACBD3Q9H3P7 528 aa20■□□□□ 0.79
USP13-201ENST00000263966 REC8O95072 547 aa19.99■□□□□ 0.79
USP13-201ENST00000263966 SART3Q15020 963 aaKnown RBP19.99■□□□□ 0.79
USP13-201ENST00000263966 CCDC97Q96F63 343 aaPredicted RBP19.99■□□□□ 0.79
USP13-201ENST00000263966 KIF6Q6ZMV9 814 aa19.99■□□□□ 0.79
USP13-201ENST00000263966 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
USP13-201ENST00000263966 RAPGEF4Q8WZA2 1011 aa19.99■□□□□ 0.79
USP13-201ENST00000263966 VGFO15240 615 aaPredicted RBP19.98■□□□□ 0.79
USP13-201ENST00000263966 CDK5RAP3Q96JB5 506 aa19.98■□□□□ 0.79
USP13-201ENST00000263966 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
USP13-201ENST00000263966 VSIG10Q8N0Z9 540 aa19.97■□□□□ 0.79
USP13-201ENST00000263966 EIF2S2P20042 333 aaKnown RBP19.97■□□□□ 0.79
USP13-201ENST00000263966 PPM1FP49593 454 aaPredicted RBP19.97■□□□□ 0.79
USP13-201ENST00000263966 HOMER1Q86YM7 354 aa19.96■□□□□ 0.79
USP13-201ENST00000263966 CHMP5Q9NZZ3 219 aa19.96■□□□□ 0.79
USP13-201ENST00000263966 ANO2Q9NQ90 1003 aa19.96■□□□□ 0.79
USP13-201ENST00000263966 FYB1O15117 783 aa19.95■□□□□ 0.78
USP13-201ENST00000263966 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.78
USP13-201ENST00000263966 NUTM2DQ5VT03 806 aaPredicted RBP19.95■□□□□ 0.78
USP13-201ENST00000263966 TXLNAP40222 546 aa19.94■□□□□ 0.78
USP13-201ENST00000263966 TMEM87AQ8NBN3 555 aa19.94■□□□□ 0.78
USP13-201ENST00000263966 CCDC191Q8NCU4 936 aa19.94■□□□□ 0.78
USP13-201ENST00000263966 ERC2O15083 957 aa19.94■□□□□ 0.78
USP13-201ENST00000263966 NAT10Q9H0A0 1025 aaKnown RBP19.94■□□□□ 0.78
USP13-201ENST00000263966 OLFM4Q6UX06 510 aa19.93■□□□□ 0.78
USP13-201ENST00000263966 HSP90AB4PQ58FF6 505 aa19.93■□□□□ 0.78
USP13-201ENST00000263966 SKOR2Q2VWA4 1001 aaPredicted RBP19.93■□□□□ 0.78
USP13-201ENST00000263966 TNIKQ9UKE5 1360 aa19.93■□□□□ 0.78
USP13-201ENST00000263966 ANKRD45Q5TZF3 282 aa19.92■□□□□ 0.78
USP13-201ENST00000263966 TBC1D2BQ9UPU7 963 aa19.92■□□□□ 0.78
USP13-201ENST00000263966 SPDYE4A6NLX3 237 aa19.92■□□□□ 0.78
USP13-201ENST00000263966 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
USP13-201ENST00000263966 FOXD4L5Q5VV16 416 aaPredicted RBP19.92■□□□□ 0.78
USP13-201ENST00000263966 FOXD4L4Q8WXT5 416 aaPredicted RBP19.92■□□□□ 0.78
USP13-201ENST00000263966 SMG6Q86US8 1419 aaKnown RBP19.92■□□□□ 0.78
USP13-201ENST00000263966 GNL3LQ9NVN8 582 aaKnown RBP19.91■□□□□ 0.78
USP13-201ENST00000263966 MAP7D2Q96T17 732 aa19.91■□□□□ 0.78
USP13-201ENST00000263966 BICD2Q8TD16 824 aa19.9■□□□□ 0.78
USP13-201ENST00000263966 SEPT7Q16181 437 aaKnown RBP19.9■□□□□ 0.78
USP13-201ENST00000263966 NINLQ9Y2I6 1382 aa19.89■□□□□ 0.78
USP13-201ENST00000263966 MPHOSPH10O00566 681 aaKnown RBP19.89■□□□□ 0.77
USP13-201ENST00000263966 RIC3Q7Z5B4 369 aa19.89■□□□□ 0.77
USP13-201ENST00000263966 CCDC144AA2RUR9 1427 aa19.89■□□□□ 0.77
USP13-201ENST00000263966 NEBLO76041 1014 aa19.89■□□□□ 0.77
USP13-201ENST00000263966 MIA2Q96PC5 1412 aa19.88■□□□□ 0.77
USP13-201ENST00000263966 SASS6Q6UVJ0 657 aa19.88■□□□□ 0.77
USP13-201ENST00000263966 ERLIN2O94905 339 aa19.88■□□□□ 0.77
USP13-201ENST00000263966 NOM1Q5C9Z4 860 aaKnown RBP19.88■□□□□ 0.77
USP13-201ENST00000263966 FOXD4L1Q9NU39 408 aa19.88■□□□□ 0.77
USP13-201ENST00000263966 SLC4A3P48751 1232 aa19.88■□□□□ 0.77
USP13-201ENST00000263966 TRAK1Q9UPV9 953 aa19.88■□□□□ 0.77
USP13-201ENST00000263966 NEFHP12036 1026 aa19.88■□□□□ 0.77
USP13-201ENST00000263966 CLUAP1Q96AJ1 413 aa19.87■□□□□ 0.77
USP13-201ENST00000263966 ZNF592Q92610 1267 aa19.87■□□□□ 0.77
USP13-201ENST00000263966 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
USP13-201ENST00000263966 CAGE1Q8TC20 777 aa19.87■□□□□ 0.77
USP13-201ENST00000263966 KRT18P05783 430 aaKnown RBP19.86■□□□□ 0.77
USP13-201ENST00000263966 MAGEC2Q9UBF1 373 aaPredicted RBP19.86■□□□□ 0.77
USP13-201ENST00000263966 HSP90B2PQ58FF3 399 aa19.86■□□□□ 0.77
USP13-201ENST00000263966 LUC7LQ9NQ29 371 aaKnown RBP19.86■□□□□ 0.77
USP13-201ENST00000263966 WASHC4Q2M389 1173 aa19.85■□□□□ 0.77
USP13-201ENST00000263966 SOGA1O94964 1423 aa19.84■□□□□ 0.77
USP13-201ENST00000263966 CCDC73Q6ZRK6 1079 aa19.84■□□□□ 0.77
USP13-201ENST00000263966 ARGLU1Q9NWB6 273 aaPredicted RBP19.84■□□□□ 0.77
USP13-201ENST00000263966 HSPA5P11021 654 aaKnown RBP19.83■□□□□ 0.77
USP13-201ENST00000263966 PDE3BQ13370 1112 aa19.83■□□□□ 0.77
USP13-201ENST00000263966 GPRASP1Q5JY77 1395 aa19.83■□□□□ 0.77
USP13-201ENST00000263966 KIF15Q9NS87 1388 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms