RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DIAPH3Q9NSV4 1193 aa14.76□□□□□ -0.05
SMG6-201ENST00000263073 CCDC34Q96HJ3 373 aa14.76□□□□□ -0.05
SMG6-201ENST00000263073 PHLDB1Q86UU1 1377 aa14.76□□□□□ -0.05
SMG6-201ENST00000263073 MARCH6O60337 910 aa14.76□□□□□ -0.05
SMG6-201ENST00000263073 CDCA7LQ96GN5 454 aa14.76□□□□□ -0.05
SMG6-201ENST00000263073 NGDNQ8NEJ9 315 aaKnown RBP14.76□□□□□ -0.05
SMG6-201ENST00000263073 NASPP49321 788 aaPredicted RBP14.75□□□□□ -0.05
SMG6-201ENST00000263073 HDGFP51858 240 aaKnown RBP14.75□□□□□ -0.05
SMG6-201ENST00000263073 DZIP1LQ8IYY4 767 aaKnown RBP14.75□□□□□ -0.05
SMG6-201ENST00000263073 PCMTD1Q96MG8 357 aaPredicted RBP14.75□□□□□ -0.05
SMG6-201ENST00000263073 CGNL1Q0VF96 1302 aa14.75□□□□□ -0.05
SMG6-201ENST00000263073 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
SMG6-201ENST00000263073 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
SMG6-201ENST00000263073 CCDC27Q2M243 656 aa14.74□□□□□ -0.05
SMG6-201ENST00000263073 ATP6V1DQ9Y5K8 247 aa14.73□□□□□ -0.05
SMG6-201ENST00000263073 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
SMG6-201ENST00000263073 CAVIN1Q6NZI2 390 aaKnown RBP14.73□□□□□ -0.05
SMG6-201ENST00000263073 TSR1Q2NL82 804 aaKnown RBP14.73□□□□□ -0.05
SMG6-201ENST00000263073 TRAK2O60296 914 aa14.72□□□□□ -0.05
SMG6-201ENST00000263073 LMOD3Q0VAK6 560 aa14.72□□□□□ -0.05
SMG6-201ENST00000263073 PKNOX2Q96KN3 472 aa14.72□□□□□ -0.05
SMG6-201ENST00000263073 RIPK4P57078 832 aa14.72□□□□□ -0.05
SMG6-201ENST00000263073 CEP89Q96ST8 783 aa14.71□□□□□ -0.05
SMG6-201ENST00000263073 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
SMG6-201ENST00000263073 KIF3AQ9Y496 699 aa14.71□□□□□ -0.06
SMG6-201ENST00000263073 RAD21O60216 631 aa14.7□□□□□ -0.06
SMG6-201ENST00000263073 REC8O95072 547 aa14.7□□□□□ -0.06
SMG6-201ENST00000263073 GPS2Q13227 327 aa14.7□□□□□ -0.06
SMG6-201ENST00000263073 TTLL5Q6EMB2 1281 aa14.7□□□□□ -0.06
SMG6-201ENST00000263073 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
SMG6-201ENST00000263073 MINK1Q8N4C8 1332 aaPredicted RBP14.69□□□□□ -0.06
SMG6-201ENST00000263073 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
SMG6-201ENST00000263073 SKIDA1Q1XH10 827 aa14.69□□□□□ -0.06
SMG6-201ENST00000263073 SMC3Q9UQE7 1217 aa14.69□□□□□ -0.06
SMG6-201ENST00000263073 KIF7Q2M1P5 1343 aa14.69□□□□□ -0.06
SMG6-201ENST00000263073 SASS6Q6UVJ0 657 aa14.69□□□□□ -0.06
SMG6-201ENST00000263073 HMOX1P09601 288 aa14.69□□□□□ -0.06
SMG6-201ENST00000263073 TEX35Q5T0J7 233 aa14.69□□□□□ -0.06
SMG6-201ENST00000263073 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
SMG6-201ENST00000263073 MRE11P49959 708 aa14.68□□□□□ -0.06
SMG6-201ENST00000263073 APPP05067 770 aa14.68□□□□□ -0.06
SMG6-201ENST00000263073 AKNAQ7Z591 1439 aa14.68□□□□□ -0.06
SMG6-201ENST00000263073 TPM1P09493 284 aa14.67□□□□□ -0.06
SMG6-201ENST00000263073 SPC24Q8NBT2 197 aa14.67□□□□□ -0.06
SMG6-201ENST00000263073 ZNF428Q96B54 188 aa14.67□□□□□ -0.06
SMG6-201ENST00000263073 C1orf115Q9H7X2 142 aa14.67□□□□□ -0.06
SMG6-201ENST00000263073 PRPF40AO75400 957 aaKnown RBP14.67□□□□□ -0.06
SMG6-201ENST00000263073 AKAP17AQ02040 695 aaKnown RBP14.67□□□□□ -0.06
SMG6-201ENST00000263073 C9orf78Q9NZ63 289 aaPredicted RBP14.67□□□□□ -0.06
SMG6-201ENST00000263073 CCDC18Q5T9S5 1454 aa14.67□□□□□ -0.06
SMG6-201ENST00000263073 CCDC144AA2RUR9 1427 aa14.67□□□□□ -0.06
SMG6-201ENST00000263073 WASHC2CQ9Y4E1 1318 aa14.67□□□□□ -0.06
SMG6-201ENST00000263073 IFIT2P09913 472 aaKnown RBP14.66□□□□□ -0.06
SMG6-201ENST00000263073 ZKSCAN1P17029 563 aaPredicted RBP14.66□□□□□ -0.06
SMG6-201ENST00000263073 MNS1Q8NEH6 495 aa14.66□□□□□ -0.06
SMG6-201ENST00000263073 PDILTQ8N807 584 aa14.66□□□□□ -0.06
SMG6-201ENST00000263073 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMG6-201ENST00000263073 INTS3Q68E01 1043 aaKnown RBP14.65□□□□□ -0.06
SMG6-201ENST00000263073 ADAMTS8Q9UP79 889 aa14.65□□□□□ -0.06
SMG6-201ENST00000263073 EFCAB2Q5VUJ9 269 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 CCDC39Q9UFE4 941 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 CPLX1O14810 134 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 NUCB2P80303 420 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
SMG6-201ENST00000263073 CCDC70Q6NSX1 233 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 SKAP1Q86WV1 359 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 G3V3G9 751 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 DHX37Q8IY37 1157 aaKnown RBP14.64□□□□□ -0.07
SMG6-201ENST00000263073 CCDC7Q96M83 1385 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 COG3Q96JB2 828 aa14.64□□□□□ -0.07
SMG6-201ENST00000263073 WASHC2AQ641Q2 1341 aa14.63□□□□□ -0.07
SMG6-201ENST00000263073 GTF2E1P29083 439 aaPredicted RBP14.63□□□□□ -0.07
SMG6-201ENST00000263073 NAP1L1P55209 391 aaKnown RBP14.63□□□□□ -0.07
SMG6-201ENST00000263073 TRIM29Q14134 588 aa14.63□□□□□ -0.07
SMG6-201ENST00000263073 TPM2P07951 284 aa14.63□□□□□ -0.07
SMG6-201ENST00000263073 HDAC5Q9UQL6 1122 aa14.63□□□□□ -0.07
SMG6-201ENST00000263073 DIAPH1O60610 1272 aaKnown RBP14.62□□□□□ -0.07
SMG6-201ENST00000263073 CEBPZQ03701 1054 aaKnown RBP14.62□□□□□ -0.07
SMG6-201ENST00000263073 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
SMG6-201ENST00000263073 NFXL1Q6ZNB6 911 aa14.62□□□□□ -0.07
SMG6-201ENST00000263073 RUFY2Q8WXA3 655 aa14.62□□□□□ -0.07
SMG6-201ENST00000263073 FMNL2Q96PY5 1086 aa14.62□□□□□ -0.07
SMG6-201ENST00000263073 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
SMG6-201ENST00000263073 BCAR3O75815 825 aa14.61□□□□□ -0.07
SMG6-201ENST00000263073 RUNDC1Q96C34 613 aa14.6□□□□□ -0.07
SMG6-201ENST00000263073 TRIM5Q9C035 493 aa14.6□□□□□ -0.07
SMG6-201ENST00000263073 MSH5O43196 834 aa14.6□□□□□ -0.07
SMG6-201ENST00000263073 CNTLNQ9NXG0 1405 aa14.59□□□□□ -0.07
SMG6-201ENST00000263073 C1orf141Q5JVX7 400 aa14.59□□□□□ -0.07
SMG6-201ENST00000263073 PRKCSHP14314 528 aaPredicted RBP14.59□□□□□ -0.07
SMG6-201ENST00000263073 C11orf95C9JLR9 678 aaPredicted RBP14.59□□□□□ -0.07
SMG6-201ENST00000263073 IPO7O95373 1038 aaKnown RBP14.59□□□□□ -0.07
SMG6-201ENST00000263073 TEFQ10587 303 aa14.59□□□□□ -0.07
SMG6-201ENST00000263073 CDC45O75419 566 aa14.59□□□□□ -0.07
SMG6-201ENST00000263073 MTMR7Q9Y216 660 aa14.59□□□□□ -0.07
SMG6-201ENST00000263073 AIMP1Q12904 312 aaKnown RBP14.58□□□□□ -0.07
SMG6-201ENST00000263073 CCDC184Q52MB2 194 aa14.58□□□□□ -0.07
SMG6-201ENST00000263073 CCDC73Q6ZRK6 1079 aa14.58□□□□□ -0.07
SMG6-201ENST00000263073 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms