RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 SUPT6HQ7KZ85 1726 aaKnown RBP17.51■□□□□ 0.39
CDH1-201ENST00000261769 ZNF692Q9BU19 519 aaPredicted RBP17.5■□□□□ 0.39
CDH1-201ENST00000261769 ERICH6BQ5W0A0 696 aa17.5■□□□□ 0.39
CDH1-201ENST00000261769 B4GALNT3Q6L9W6 998 aa17.5■□□□□ 0.39
CDH1-201ENST00000261769 FRAT2O75474 233 aaPredicted RBP17.5■□□□□ 0.39
CDH1-201ENST00000261769 HSP90AB1P08238 724 aaKnown RBP17.49■□□□□ 0.39
CDH1-201ENST00000261769 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
CDH1-201ENST00000261769 TAOK2Q9UL54 1235 aa17.49■□□□□ 0.39
CDH1-201ENST00000261769 DENND4BO75064 1496 aaPredicted RBP17.49■□□□□ 0.39
CDH1-201ENST00000261769 E9PSI1 815 aa17.49■□□□□ 0.39
CDH1-201ENST00000261769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.48■□□□□ 0.39
CDH1-201ENST00000261769 NUTM2GQ5VZR2 741 aa17.48■□□□□ 0.39
CDH1-201ENST00000261769 AKNAQ7Z591 1439 aa17.48■□□□□ 0.39
CDH1-201ENST00000261769 DDX58O95786 925 aaKnown RBP17.47■□□□□ 0.39
CDH1-201ENST00000261769 CLUAP1Q96AJ1 413 aa17.47■□□□□ 0.39
CDH1-201ENST00000261769 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
CDH1-201ENST00000261769 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
CDH1-201ENST00000261769 ROCK1Q13464 1354 aa17.46■□□□□ 0.39
CDH1-201ENST00000261769 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
CDH1-201ENST00000261769 RIPK4P57078 832 aa17.45■□□□□ 0.38
CDH1-201ENST00000261769 KIF14Q15058 1648 aa17.45■□□□□ 0.38
CDH1-201ENST00000261769 EIF2S2P20042 333 aaKnown RBP17.44■□□□□ 0.38
CDH1-201ENST00000261769 ERBINQ96RT1 1412 aa17.44■□□□□ 0.38
CDH1-201ENST00000261769 APAF1O14727 1248 aa17.43■□□□□ 0.38
CDH1-201ENST00000261769 HSCBQ8IWL3 235 aa17.43■□□□□ 0.38
CDH1-201ENST00000261769 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
CDH1-201ENST00000261769 NBR1Q14596 966 aa17.42■□□□□ 0.38
CDH1-201ENST00000261769 CDK19Q9BWU1 502 aa17.42■□□□□ 0.38
CDH1-201ENST00000261769 GNAI1P63096 354 aa17.41■□□□□ 0.38
CDH1-201ENST00000261769 CCDC7Q96M83 1385 aa17.41■□□□□ 0.38
CDH1-201ENST00000261769 RTEL1-TNFRSF6BF6WH68 1400 aa17.41■□□□□ 0.38
CDH1-201ENST00000261769 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
CDH1-201ENST00000261769 KIF7Q2M1P5 1343 aa17.41■□□□□ 0.38
CDH1-201ENST00000261769 FANCAO15360 1455 aa17.41■□□□□ 0.38
CDH1-201ENST00000261769 TEX14Q8IWB6 1497 aa17.41■□□□□ 0.38
CDH1-201ENST00000261769 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
CDH1-201ENST00000261769 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
CDH1-201ENST00000261769 C9orf78Q9NZ63 289 aaPredicted RBP17.4■□□□□ 0.38
CDH1-201ENST00000261769 TULP1O00294 542 aaPredicted RBP17.39■□□□□ 0.38
CDH1-201ENST00000261769 SMG6Q86US8 1419 aaKnown RBP17.39■□□□□ 0.37
CDH1-201ENST00000261769 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
CDH1-201ENST00000261769 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
CDH1-201ENST00000261769 API5Q9BZZ5 524 aaKnown RBP17.39■□□□□ 0.37
CDH1-201ENST00000261769 USP35Q9P2H5 1018 aa17.39■□□□□ 0.37
CDH1-201ENST00000261769 TSPYL4Q9UJ04 414 aa17.38■□□□□ 0.37
CDH1-201ENST00000261769 NBPF1Q3BBV0 1214 aa17.38■□□□□ 0.37
CDH1-201ENST00000261769 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
CDH1-201ENST00000261769 HMOX1P09601 288 aa17.37■□□□□ 0.37
CDH1-201ENST00000261769 GNL2Q13823 731 aaKnown RBP17.37■□□□□ 0.37
CDH1-201ENST00000261769 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
CDH1-201ENST00000261769 TATP17735 454 aaPredicted RBP17.37■□□□□ 0.37
CDH1-201ENST00000261769 SF3B2Q13435 895 aaKnown RBP17.37■□□□□ 0.37
CDH1-201ENST00000261769 PRDM11Q9NQV5 511 aa17.37■□□□□ 0.37
CDH1-201ENST00000261769 WASHC2AQ641Q2 1341 aa17.37■□□□□ 0.37
CDH1-201ENST00000261769 ATAD2Q6PL18 1390 aa17.37■□□□□ 0.37
CDH1-201ENST00000261769 NUTM2BA6NNL0 878 aaPredicted RBP17.37■□□□□ 0.37
CDH1-201ENST00000261769 NUTM2EB1AL46 878 aaPredicted RBP17.37■□□□□ 0.37
CDH1-201ENST00000261769 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
CDH1-201ENST00000261769 CABP1Q9NZU7 370 aa17.37■□□□□ 0.37
CDH1-201ENST00000261769 BIVM-ERCC5R4GMW8 1640 aa17.37■□□□□ 0.37
CDH1-201ENST00000261769 PIP4K2BP78356 416 aa17.37■□□□□ 0.37
CDH1-201ENST00000261769 MTHFSP49914 203 aa17.36■□□□□ 0.37
CDH1-201ENST00000261769 LRRFIP1Q32MZ4 808 aaKnown RBP17.35■□□□□ 0.37
CDH1-201ENST00000261769 TPRNQ4KMQ1 711 aa17.35■□□□□ 0.37
CDH1-201ENST00000261769 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
CDH1-201ENST00000261769 PCF11O94913 1555 aaKnown RBP17.34■□□□□ 0.37
CDH1-201ENST00000261769 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
CDH1-201ENST00000261769 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.37
CDH1-201ENST00000261769 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.37
CDH1-201ENST00000261769 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
CDH1-201ENST00000261769 ASXL2Q76L83 1435 aa17.33■□□□□ 0.36
CDH1-201ENST00000261769 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
CDH1-201ENST00000261769 BCL2L13Q9BXK5 485 aa17.32■□□□□ 0.36
CDH1-201ENST00000261769 CEBPAP49715 358 aaPredicted RBP17.32■□□□□ 0.36
CDH1-201ENST00000261769 MAP3K1Q13233 1512 aa17.32■□□□□ 0.36
CDH1-201ENST00000261769 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
CDH1-201ENST00000261769 DHX29Q7Z478 1369 aaKnown RBP17.31■□□□□ 0.36
CDH1-201ENST00000261769 NOL10Q9BSC4 688 aaKnown RBP17.31■□□□□ 0.36
CDH1-201ENST00000261769 ABCC5O15440 1437 aa17.3■□□□□ 0.36
CDH1-201ENST00000261769 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
CDH1-201ENST00000261769 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
CDH1-201ENST00000261769 NAIPQ13075 1403 aa17.29■□□□□ 0.36
CDH1-201ENST00000261769 IDI1Q13907 227 aa17.29■□□□□ 0.36
CDH1-201ENST00000261769 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
CDH1-201ENST00000261769 KCNH5Q8NCM2 988 aa17.29■□□□□ 0.36
CDH1-201ENST00000261769 TOMM22Q9NS69 142 aa17.29■□□□□ 0.36
CDH1-201ENST00000261769 NUDT16Q96DE0 195 aaKnown RBP17.28■□□□□ 0.36
CDH1-201ENST00000261769 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
CDH1-201ENST00000261769 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
CDH1-201ENST00000261769 DDX19BQ9UMR2 479 aa17.28■□□□□ 0.36
CDH1-201ENST00000261769 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
CDH1-201ENST00000261769 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
CDH1-201ENST00000261769 KIF16BQ96L93 1317 aa17.28■□□□□ 0.36
CDH1-201ENST00000261769 VPS37DQ86XT2 251 aa17.27■□□□□ 0.36
CDH1-201ENST00000261769 CNTLNQ9NXG0 1405 aa17.27■□□□□ 0.35
CDH1-201ENST00000261769 PTMAP06454 111 aaKnown RBP17.26■□□□□ 0.35
CDH1-201ENST00000261769 KLHL34Q8N239 644 aa17.26■□□□□ 0.35
CDH1-201ENST00000261769 AMOTL2Q9Y2J4 779 aa17.26■□□□□ 0.35
CDH1-201ENST00000261769 PLCH2O75038 1416 aa17.26■□□□□ 0.35
CDH1-201ENST00000261769 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms