RNA–Protein interactions for RNA: ENST00000261590.12

DSG2-201, Transcript of desmoglein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG2, Length 5,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG2-201ENST00000261590 TRIM34Q9BYJ4 488 aa27.13■■□□□ 1.93
DSG2-201ENST00000261590 VPS37CA5D8V6 355 aaPredicted RBP27.12■■□□□ 1.93
DSG2-201ENST00000261590 H0YHG0 523 aa27.12■■□□□ 1.93
DSG2-201ENST00000261590 APPP05067 770 aa27.12■■□□□ 1.93
DSG2-201ENST00000261590 CNKSR2Q8WXI2 1034 aa27.11■■□□□ 1.93
DSG2-201ENST00000261590 BCL11BQ9C0K0 894 aaPredicted RBP27.11■■□□□ 1.93
DSG2-201ENST00000261590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.11■■□□□ 1.933e-9■■■■■ 34.6
DSG2-201ENST00000261590 COG6Q9Y2V7 657 aa27.1■■□□□ 1.93
DSG2-201ENST00000261590 RRP1P56182 461 aaKnown RBP27.1■■□□□ 1.93
DSG2-201ENST00000261590 DCTN1Q14203 1278 aa27.1■■□□□ 1.93
DSG2-201ENST00000261590 ODF2Q5BJF6 829 aa27.08■■□□□ 1.93
DSG2-201ENST00000261590 MYBBP1AQ9BQG0 1328 aaKnown RBP27.08■■□□□ 1.93
DSG2-201ENST00000261590 KIF15Q9NS87 1388 aa27.08■■□□□ 1.93
DSG2-201ENST00000261590 CWC15Q9P013 229 aaKnown RBP27.08■■□□□ 1.93
DSG2-201ENST00000261590 E9PSI1 815 aa27.08■■□□□ 1.92
DSG2-201ENST00000261590 CCDC73Q6ZRK6 1079 aa27.08■■□□□ 1.92
DSG2-201ENST00000261590 CGNL1Q0VF96 1302 aa27.08■■□□□ 1.92
DSG2-201ENST00000261590 TRDNQ13061 729 aa27.07■■□□□ 1.92
DSG2-201ENST00000261590 SMC3Q9UQE7 1217 aa27.07■■□□□ 1.92
DSG2-201ENST00000261590 RNF20Q5VTR2 975 aa27.07■■□□□ 1.92
DSG2-201ENST00000261590 RAB3GAP2Q9H2M9 1393 aa27.07■■□□□ 1.92
DSG2-201ENST00000261590 IFIT2P09913 472 aaKnown RBP27.07■■□□□ 1.92
DSG2-201ENST00000261590 NFXL1Q6ZNB6 911 aa27.07■■□□□ 1.92
DSG2-201ENST00000261590 R3HCC1Q9Y3T6 440 aaKnown RBP27.07■■□□□ 1.92
DSG2-201ENST00000261590 CCDC43Q96MW1 224 aaKnown RBP27.06■■□□□ 1.92
DSG2-201ENST00000261590 RDXP35241 583 aaKnown RBP27.06■■□□□ 1.92
DSG2-201ENST00000261590 NEXNQ0ZGT2 675 aa27.05■■□□□ 1.92
DSG2-201ENST00000261590 NUCB2P80303 420 aa27.04■■□□□ 1.92
DSG2-201ENST00000261590 C9orf78Q9NZ63 289 aaPredicted RBP27.04■■□□□ 1.92
DSG2-201ENST00000261590 NUTM2DQ5VT03 806 aaPredicted RBP27.04■■□□□ 1.92
DSG2-201ENST00000261590 CAGE1Q8TC20 777 aa27.04■■□□□ 1.92
DSG2-201ENST00000261590 FOSBP53539 338 aa27.03■■□□□ 1.92
DSG2-201ENST00000261590 CCDC173Q0VFZ6 552 aa27.03■■□□□ 1.92
DSG2-201ENST00000261590 C1orf141Q5JVX7 400 aa27.03■■□□□ 1.92
DSG2-201ENST00000261590 HSP90AB2PQ58FF8 381 aa27.02■■□□□ 1.92
DSG2-201ENST00000261590 ERCC4Q92889 916 aaPredicted RBP27.02■■□□□ 1.92
DSG2-201ENST00000261590 CCDC39Q9UFE4 941 aa27.02■■□□□ 1.92
DSG2-201ENST00000261590 L3MBTL2Q969R5 705 aa27.01■■□□□ 1.92
DSG2-201ENST00000261590 ERICH2A1L162 156 aa27.01■■□□□ 1.91
DSG2-201ENST00000261590 NUTM2FA1L443 756 aa27.01■■□□□ 1.91
DSG2-201ENST00000261590 NGEFQ8N5V2 710 aa27.01■■□□□ 1.91
DSG2-201ENST00000261590 FANCIQ9NVI1 1328 aa27.01■■□□□ 1.91
DSG2-201ENST00000261590 PDILTQ8N807 584 aa27.01■■□□□ 1.91
DSG2-201ENST00000261590 ANKRD30AQ9BXX3 1397 aa27■■□□□ 1.91
DSG2-201ENST00000261590 DDX19BQ9UMR2 479 aa27■■□□□ 1.91
DSG2-201ENST00000261590 SAFBQ15424 915 aaKnown RBP eCLIP27■■□□□ 1.91
DSG2-201ENST00000261590 MTERF4Q7Z6M4 381 aaKnown RBP27■■□□□ 1.91
DSG2-201ENST00000261590 OFD1O75665 1012 aa26.99■■□□□ 1.91
DSG2-201ENST00000261590 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.99■■□□□ 1.91
DSG2-201ENST00000261590 ZFYVE27Q5T4F4 411 aa26.99■■□□□ 1.91
DSG2-201ENST00000261590 OLFM4Q6UX06 510 aa26.98■■□□□ 1.91
DSG2-201ENST00000261590 EIF2S2P20042 333 aaKnown RBP26.98■■□□□ 1.91
DSG2-201ENST00000261590 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
DSG2-201ENST00000261590 CCDC66A2RUB6 948 aa26.98■■□□□ 1.91
DSG2-201ENST00000261590 NAT10Q9H0A0 1025 aaKnown RBP26.98■■□□□ 1.91
DSG2-201ENST00000261590 EID1Q9Y6B2 187 aa26.97■■□□□ 1.91
DSG2-201ENST00000261590 TEFQ10587 303 aa26.97■■□□□ 1.91
DSG2-201ENST00000261590 EPS15P42566 896 aa26.96■■□□□ 1.91
DSG2-201ENST00000261590 INTS3Q68E01 1043 aaKnown RBP26.96■■□□□ 1.91
DSG2-201ENST00000261590 PANK3Q9H999 370 aa26.96■■□□□ 1.91
DSG2-201ENST00000261590 PLCD4Q9BRC7 762 aa26.95■■□□□ 1.9
DSG2-201ENST00000261590 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.9
DSG2-201ENST00000261590 VPS37DQ86XT2 251 aa26.95■■□□□ 1.9
DSG2-201ENST00000261590 TTLL5Q6EMB2 1281 aa26.95■■□□□ 1.9
DSG2-201ENST00000261590 NASPP49321 788 aaPredicted RBP26.94■■□□□ 1.9
DSG2-201ENST00000261590 TRAK1Q9UPV9 953 aa26.94■■□□□ 1.9
DSG2-201ENST00000261590 SKIDA1Q1XH10 827 aa26.94■■□□□ 1.9
DSG2-201ENST00000261590 TTC5Q8N0Z6 440 aa26.94■■□□□ 1.9
DSG2-201ENST00000261590 KANK4Q5T7N3 995 aaPredicted RBP26.93■■□□□ 1.9
DSG2-201ENST00000261590 MYO6Q9UM54 1294 aa26.93■■□□□ 1.9
DSG2-201ENST00000261590 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
DSG2-201ENST00000261590 KIF3BO15066 747 aa26.93■■□□□ 1.9
DSG2-201ENST00000261590 TSPYL1Q9H0U9 437 aa26.93■■□□□ 1.9
DSG2-201ENST00000261590 MRE11P49959 708 aa26.92■■□□□ 1.9
DSG2-201ENST00000261590 G3BP1Q13283 466 aaKnown RBP eCLIP26.92■■□□□ 1.96e-7■■■□□ 18.4
DSG2-201ENST00000261590 FMN1Q68DA7 1419 aa26.92■■□□□ 1.9
DSG2-201ENST00000261590 COG3Q96JB2 828 aa26.91■■□□□ 1.9
DSG2-201ENST00000261590 DZIP1LQ8IYY4 767 aaKnown RBP26.9■■□□□ 1.9
DSG2-201ENST00000261590 API5Q9BZZ5 524 aaKnown RBP26.9■■□□□ 1.9
DSG2-201ENST00000261590 RNF214Q8ND24 703 aa26.9■■□□□ 1.9
DSG2-201ENST00000261590 EFCAB2Q5VUJ9 269 aa26.89■■□□□ 1.9
DSG2-201ENST00000261590 NECTIN2Q92692 538 aa26.89■■□□□ 1.89
DSG2-201ENST00000261590 SDF4Q9BRK5 362 aa26.88■■□□□ 1.89
DSG2-201ENST00000261590 ZBED9Q6R2W3 1325 aa26.88■■□□□ 1.89
DSG2-201ENST00000261590 MSH5O43196 834 aa26.88■■□□□ 1.89
DSG2-201ENST00000261590 LEKR1Q6ZMV7 388 aa26.88■■□□□ 1.89
DSG2-201ENST00000261590 C22orf23Q9BZE7 217 aa26.87■■□□□ 1.89
DSG2-201ENST00000261590 VPS8Q8N3P4 1428 aa26.87■■□□□ 1.89
DSG2-201ENST00000261590 ROCK1Q13464 1354 aa26.87■■□□□ 1.89
DSG2-201ENST00000261590 HSP90AB3PQ58FF7 597 aa26.87■■□□□ 1.89
DSG2-201ENST00000261590 RALYLQ86SE5 291 aaKnown RBP26.86■■□□□ 1.89
DSG2-201ENST00000261590 NFKBIBQ15653 356 aa26.86■■□□□ 1.89
DSG2-201ENST00000261590 AXDND1Q5T1B0 1012 aaPredicted RBP26.86■■□□□ 1.89
DSG2-201ENST00000261590 TRIM5Q9C035 493 aa26.85■■□□□ 1.89
DSG2-201ENST00000261590 BRMS1Q9HCU9 246 aa26.85■■□□□ 1.89
DSG2-201ENST00000261590 APAF1O14727 1248 aa26.85■■□□□ 1.89
DSG2-201ENST00000261590 SAMD1Q6SPF0 538 aaPredicted RBP26.84■■□□□ 1.89
DSG2-201ENST00000261590 DDX58O95786 925 aaKnown RBP26.84■■□□□ 1.89
DSG2-201ENST00000261590 ERC2O15083 957 aa26.84■■□□□ 1.89
DSG2-201ENST00000261590 ST20-MTHFSA0A0A6YYL1 179 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms