RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 AFAP1Q8N556 730 aa22.49■■□□□ 1.19
SLC52A1-201ENST00000254853 CDCA8Q53HL2 280 aa22.49■■□□□ 1.19
SLC52A1-201ENST00000254853 RTL5Q5HYW3 569 aaPredicted RBP22.49■■□□□ 1.19
SLC52A1-201ENST00000254853 PTPRTO14522 1441 aa22.48■■□□□ 1.19
SLC52A1-201ENST00000254853 SCAPERQ9BY12 1400 aa22.48■■□□□ 1.19
SLC52A1-201ENST00000254853 DUSP27Q5VZP5 1158 aa22.48■■□□□ 1.19
SLC52A1-201ENST00000254853 CLTCL1P53675 1640 aa22.48■■□□□ 1.19
SLC52A1-201ENST00000254853 CEP152O94986 1710 aa22.47■■□□□ 1.19
SLC52A1-201ENST00000254853 ZNF521Q96K83 1311 aa22.47■■□□□ 1.19
SLC52A1-201ENST00000254853 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
SLC52A1-201ENST00000254853 RTEL1-TNFRSF6BF6WH68 1400 aa22.46■■□□□ 1.19
SLC52A1-201ENST00000254853 ZFYVE16Q7Z3T8 1539 aa22.46■■□□□ 1.19
SLC52A1-201ENST00000254853 UHRF1BP1LA0JNW5 1464 aa22.45■■□□□ 1.18
SLC52A1-201ENST00000254853 STAC3Q96MF2 364 aa22.45■■□□□ 1.18
SLC52A1-201ENST00000254853 GOLGA2Q08379 1002 aa22.44■■□□□ 1.18
SLC52A1-201ENST00000254853 PIK3C2GO75747 1445 aa22.44■■□□□ 1.18
SLC52A1-201ENST00000254853 KDM2BQ8NHM5 1336 aa22.44■■□□□ 1.18
SLC52A1-201ENST00000254853 MYOM1P52179 1685 aa22.42■■□□□ 1.18
SLC52A1-201ENST00000254853 DEPDC5O75140 1603 aa22.41■■□□□ 1.18
SLC52A1-201ENST00000254853 LAS1LQ9Y4W2 734 aaKnown RBP22.4■■□□□ 1.18
SLC52A1-201ENST00000254853 EIF3AQ14152 1382 aaKnown RBP22.4■■□□□ 1.18
SLC52A1-201ENST00000254853 NPC1L1Q9UHC9 1359 aa22.4■■□□□ 1.18
SLC52A1-201ENST00000254853 TET3O43151 1660 aa22.4■■□□□ 1.18
SLC52A1-201ENST00000254853 CCDC146Q8IYE0 955 aa22.4■■□□□ 1.18
SLC52A1-201ENST00000254853 CLASP1Q7Z460 1538 aa22.4■■□□□ 1.18
SLC52A1-201ENST00000254853 SLFN5Q08AF3 891 aa22.39■■□□□ 1.18
SLC52A1-201ENST00000254853 CENPQQ7L2Z9 268 aaPredicted RBP22.38■■□□□ 1.17
SLC52A1-201ENST00000254853 KANK1Q14678 1352 aa22.37■■□□□ 1.17
SLC52A1-201ENST00000254853 ARAP3Q8WWN8 1544 aa22.37■■□□□ 1.17
SLC52A1-201ENST00000254853 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
SLC52A1-201ENST00000254853 KDM5AP29375 1690 aaKnown RBP22.35■■□□□ 1.17
SLC52A1-201ENST00000254853 CFAP70Q5T0N1 1121 aa22.35■■□□□ 1.17
SLC52A1-201ENST00000254853 TRMT2AQ8IZ69 625 aaKnown RBP22.35■■□□□ 1.17
SLC52A1-201ENST00000254853 VWDEQ8N2E2 1590 aa22.35■■□□□ 1.17
SLC52A1-201ENST00000254853 KIAA1210Q9ULL0 1709 aa22.34■■□□□ 1.17
SLC52A1-201ENST00000254853 KIF3BO15066 747 aa22.34■■□□□ 1.17
SLC52A1-201ENST00000254853 APAF1O14727 1248 aa22.34■■□□□ 1.17
SLC52A1-201ENST00000254853 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
SLC52A1-201ENST00000254853 ATP7AQ04656 1500 aa22.33■■□□□ 1.17
SLC52A1-201ENST00000254853 ERVK-7P63135 1459 aa22.33■■□□□ 1.16
SLC52A1-201ENST00000254853 NEFMP07197 916 aa22.32■■□□□ 1.16
SLC52A1-201ENST00000254853 DDRGK1Q96HY6 314 aa22.32■■□□□ 1.16
SLC52A1-201ENST00000254853 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
SLC52A1-201ENST00000254853 UGGT1Q9NYU2 1555 aa22.32■■□□□ 1.16
SLC52A1-201ENST00000254853 INO80Q9ULG1 1556 aaPredicted RBP22.31■■□□□ 1.16
SLC52A1-201ENST00000254853 CARD14Q9BXL6 1004 aa22.31■■□□□ 1.16
SLC52A1-201ENST00000254853 ABCA6Q8N139 1617 aa22.29■■□□□ 1.16
SLC52A1-201ENST00000254853 MAP3K4Q9Y6R4 1608 aa22.29■■□□□ 1.16
SLC52A1-201ENST00000254853 NEURL4Q96JN8 1562 aa22.29■■□□□ 1.16
SLC52A1-201ENST00000254853 FANCAO15360 1455 aa22.29■■□□□ 1.16
SLC52A1-201ENST00000254853 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
SLC52A1-201ENST00000254853 MYOM2P54296 1465 aa22.28■■□□□ 1.16
SLC52A1-201ENST00000254853 PPM1GO15355 546 aaPredicted RBP22.28■■□□□ 1.16
SLC52A1-201ENST00000254853 USP35Q9P2H5 1018 aa22.27■■□□□ 1.16
SLC52A1-201ENST00000254853 BCAR3O75815 825 aa22.26■■□□□ 1.15
SLC52A1-201ENST00000254853 ABCA9Q8IUA7 1624 aa22.26■■□□□ 1.15
SLC52A1-201ENST00000254853 MROH1Q8NDA8 1641 aa22.26■■□□□ 1.15
SLC52A1-201ENST00000254853 FAM161AQ3B820 660 aa22.26■■□□□ 1.15
SLC52A1-201ENST00000254853 DMRT2Q9Y5R5 561 aa22.26■■□□□ 1.15
SLC52A1-201ENST00000254853 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
SLC52A1-201ENST00000254853 C8orf34Q49A92 452 aa22.25■■□□□ 1.15
SLC52A1-201ENST00000254853 E9PSI1 815 aa22.25■■□□□ 1.15
SLC52A1-201ENST00000254853 ADGRL1O94910 1474 aa22.23■■□□□ 1.15
SLC52A1-201ENST00000254853 RGS3P49796 1198 aa22.22■■□□□ 1.15
SLC52A1-201ENST00000254853 SLC4A3P48751 1232 aa22.21■■□□□ 1.15
SLC52A1-201ENST00000254853 KIF1BO60333 1816 aa22.2■■□□□ 1.14
SLC52A1-201ENST00000254853 EFCAB6Q5THR3 1501 aa22.2■■□□□ 1.14
SLC52A1-201ENST00000254853 DNAJC5Q9H3Z4 198 aa22.2■■□□□ 1.14
SLC52A1-201ENST00000254853 MROH2AA6NES4 1674 aa22.19■■□□□ 1.14
SLC52A1-201ENST00000254853 IFT172Q9UG01 1749 aa22.19■■□□□ 1.14
SLC52A1-201ENST00000254853 NRXN1Q9ULB1 1477 aa22.19■■□□□ 1.14
SLC52A1-201ENST00000254853 POLR3AO14802 1390 aaPredicted RBP22.18■■□□□ 1.14
SLC52A1-201ENST00000254853 NGEFQ8N5V2 710 aa22.18■■□□□ 1.14
SLC52A1-201ENST00000254853 MYO3AQ8NEV4 1616 aa22.17■■□□□ 1.14
SLC52A1-201ENST00000254853 PPRC1Q5VV67 1664 aaKnown RBP22.16■■□□□ 1.14
SLC52A1-201ENST00000254853 SBNO2Q9Y2G9 1366 aa22.16■■□□□ 1.14
SLC52A1-201ENST00000254853 CENPJQ9HC77 1338 aaPredicted RBP22.16■■□□□ 1.14
SLC52A1-201ENST00000254853 NOS1P29475 1434 aa22.16■■□□□ 1.14
SLC52A1-201ENST00000254853 WWC1Q8IX03 1113 aa22.16■■□□□ 1.14
SLC52A1-201ENST00000254853 IGHDP01880 384 aa22.14■■□□□ 1.14
SLC52A1-201ENST00000254853 DAXXQ9UER7 740 aaPredicted RBP22.14■■□□□ 1.13
SLC52A1-201ENST00000254853 NSD3Q9BZ95 1437 aa22.14■■□□□ 1.13
SLC52A1-201ENST00000254853 CHGAP10645 457 aaKnown RBP22.13■■□□□ 1.13
SLC52A1-201ENST00000254853 MORC1Q86VD1 984 aa22.12■■□□□ 1.13
SLC52A1-201ENST00000254853 TRAK1Q9UPV9 953 aa22.12■■□□□ 1.13
SLC52A1-201ENST00000254853 TNNT2P45379 298 aaPredicted RBP22.12■■□□□ 1.13
SLC52A1-201ENST00000254853 PDE3AQ14432 1141 aa22.12■■□□□ 1.13
SLC52A1-201ENST00000254853 KIDINS220Q9ULH0 1771 aa22.11■■□□□ 1.13
SLC52A1-201ENST00000254853 CGNL1Q0VF96 1302 aa22.11■■□□□ 1.13
SLC52A1-201ENST00000254853 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
SLC52A1-201ENST00000254853 NFKBIBQ15653 356 aa22.11■■□□□ 1.13
SLC52A1-201ENST00000254853 SLC12A5Q9H2X9 1139 aa22.11■■□□□ 1.13
SLC52A1-201ENST00000254853 LMTK2Q8IWU2 1503 aa22.11■■□□□ 1.13
SLC52A1-201ENST00000254853 PANK1Q8TE04 598 aa22.1■■□□□ 1.13
SLC52A1-201ENST00000254853 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
SLC52A1-201ENST00000254853 SHPRHQ149N8 1683 aa22.09■■□□□ 1.13
SLC52A1-201ENST00000254853 CANXP27824 592 aaKnown RBP22.09■■□□□ 1.13
SLC52A1-201ENST00000254853 NEUROD2Q15784 382 aa22.09■■□□□ 1.13
SLC52A1-201ENST00000254853 COG6Q9Y2V7 657 aa22.09■■□□□ 1.13
SLC52A1-201ENST00000254853 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms