RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 HSPA2P54652 639 aa20.5■□□□□ 0.87
VPS25-201ENST00000253794 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.5■□□□□ 0.87
VPS25-201ENST00000253794 PPLO60437 1756 aa20.49■□□□□ 0.87
VPS25-201ENST00000253794 HDGFP51858 240 aaKnown RBP20.49■□□□□ 0.87
VPS25-201ENST00000253794 STAC3Q96MF2 364 aa20.49■□□□□ 0.87
VPS25-201ENST00000253794 MYOM2P54296 1465 aa20.49■□□□□ 0.87
VPS25-201ENST00000253794 ANKLE2Q86XL3 938 aa20.48■□□□□ 0.87
VPS25-201ENST00000253794 POLR1AO95602 1720 aaPredicted RBP20.47■□□□□ 0.87
VPS25-201ENST00000253794 LTKP29376 864 aa20.47■□□□□ 0.87
VPS25-201ENST00000253794 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
VPS25-201ENST00000253794 NRXN1Q9ULB1 1477 aa20.47■□□□□ 0.87
VPS25-201ENST00000253794 STRCQ7RTU9 1775 aa20.46■□□□□ 0.87
VPS25-201ENST00000253794 EID1Q9Y6B2 187 aa20.46■□□□□ 0.87
VPS25-201ENST00000253794 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
VPS25-201ENST00000253794 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
VPS25-201ENST00000253794 TXNDC2Q86VQ3 553 aa20.45■□□□□ 0.86
VPS25-201ENST00000253794 TIMELESSQ9UNS1 1208 aa20.45■□□□□ 0.86
VPS25-201ENST00000253794 VGFO15240 615 aaPredicted RBP20.44■□□□□ 0.86
VPS25-201ENST00000253794 NEUROD1Q13562 356 aa20.43■□□□□ 0.86
VPS25-201ENST00000253794 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
VPS25-201ENST00000253794 NPHP4O75161 1426 aaPredicted RBP20.42■□□□□ 0.86
VPS25-201ENST00000253794 L3MBTL2Q969R5 705 aa20.41■□□□□ 0.86
VPS25-201ENST00000253794 PIK3C2GO75747 1445 aa20.4■□□□□ 0.86
VPS25-201ENST00000253794 TONSLQ96HA7 1378 aa20.4■□□□□ 0.86
VPS25-201ENST00000253794 NCKAP5LQ9HCH0 1330 aa20.4■□□□□ 0.86
VPS25-201ENST00000253794 IQGAP1P46940 1657 aa20.39■□□□□ 0.86
VPS25-201ENST00000253794 NRXN3Q9Y4C0 1643 aa20.38■□□□□ 0.85
VPS25-201ENST00000253794 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
VPS25-201ENST00000253794 ADGRF5Q8IZF2 1346 aa20.38■□□□□ 0.85
VPS25-201ENST00000253794 PPP1R15AO75807 674 aaPredicted RBP20.38■□□□□ 0.85
VPS25-201ENST00000253794 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
VPS25-201ENST00000253794 ADAMTS13Q76LX8 1427 aa20.37■□□□□ 0.85
VPS25-201ENST00000253794 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
VPS25-201ENST00000253794 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
VPS25-201ENST00000253794 PRAG1Q86YV5 1406 aa20.35■□□□□ 0.85
VPS25-201ENST00000253794 TBX22Q9Y458 520 aa20.33■□□□□ 0.85
VPS25-201ENST00000253794 LAMC1P11047 1609 aa20.33■□□□□ 0.84
VPS25-201ENST00000253794 SETD1AO15047 1707 aaKnown RBP20.33■□□□□ 0.84
VPS25-201ENST00000253794 ALKQ9UM73 1620 aa20.31■□□□□ 0.84
VPS25-201ENST00000253794 PIK3R4Q99570 1358 aa20.31■□□□□ 0.84
VPS25-201ENST00000253794 C14orf93Q9H972 538 aaKnown RBP20.3■□□□□ 0.84
VPS25-201ENST00000253794 KDM2AQ9Y2K7 1162 aa20.3■□□□□ 0.84
VPS25-201ENST00000253794 KIAA1210Q9ULL0 1709 aa20.3■□□□□ 0.84
VPS25-201ENST00000253794 ASXL1Q8IXJ9 1541 aa20.26■□□□□ 0.83
VPS25-201ENST00000253794 ADGRB1O14514 1584 aa20.25■□□□□ 0.83
VPS25-201ENST00000253794 SLC26A8Q96RN1 970 aa20.25■□□□□ 0.83
VPS25-201ENST00000253794 NWD1Q149M9 1564 aa20.25■□□□□ 0.83
VPS25-201ENST00000253794 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
VPS25-201ENST00000253794 METP08581 1390 aa20.24■□□□□ 0.83
VPS25-201ENST00000253794 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
VPS25-201ENST00000253794 CFAP70Q5T0N1 1121 aa20.23■□□□□ 0.83
VPS25-201ENST00000253794 BCANQ96GW7 911 aa20.23■□□□□ 0.83
VPS25-201ENST00000253794 RALGAPBQ86X10 1494 aa20.23■□□□□ 0.83
VPS25-201ENST00000253794 GPRASP1Q5JY77 1395 aa20.22■□□□□ 0.83
VPS25-201ENST00000253794 CHD2O14647 1828 aaKnown RBP20.21■□□□□ 0.83
VPS25-201ENST00000253794 XRN1Q8IZH2 1706 aaKnown RBP20.21■□□□□ 0.83
VPS25-201ENST00000253794 TECPR2O15040 1411 aa20.2■□□□□ 0.82
VPS25-201ENST00000253794 PTPRUQ92729 1446 aa20.2■□□□□ 0.82
VPS25-201ENST00000253794 KCNA6P17658 529 aa20.19■□□□□ 0.82
VPS25-201ENST00000253794 LRPPRCP42704 1394 aaKnown RBP20.19■□□□□ 0.82
VPS25-201ENST00000253794 NKTRP30414 1462 aaKnown RBP20.18■□□□□ 0.82
VPS25-201ENST00000253794 ABCC11Q96J66 1382 aa20.18■□□□□ 0.82
VPS25-201ENST00000253794 YTHDC2Q9H6S0 1430 aaKnown RBP20.18■□□□□ 0.82
VPS25-201ENST00000253794 KNDC1Q76NI1 1749 aa20.17■□□□□ 0.82
VPS25-201ENST00000253794 PTCH1Q13635 1447 aa20.17■□□□□ 0.82
VPS25-201ENST00000253794 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
VPS25-201ENST00000253794 LTBP4Q8N2S1 1624 aa20.16■□□□□ 0.82
VPS25-201ENST00000253794 CPS1P31327 1500 aa20.15■□□□□ 0.82
VPS25-201ENST00000253794 DLC1Q96QB1 1528 aa20.15■□□□□ 0.82
VPS25-201ENST00000253794 STRCP1A6NGW2 1772 aa20.15■□□□□ 0.82
VPS25-201ENST00000253794 ZNF335Q9H4Z2 1342 aaPredicted RBP20.14■□□□□ 0.81
VPS25-201ENST00000253794 NBPF1Q3BBV0 1214 aa20.14■□□□□ 0.81
VPS25-201ENST00000253794 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
VPS25-201ENST00000253794 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
VPS25-201ENST00000253794 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
VPS25-201ENST00000253794 AMOTL2Q9Y2J4 779 aa20.13■□□□□ 0.81
VPS25-201ENST00000253794 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
VPS25-201ENST00000253794 ZEB1P37275 1124 aaPredicted RBP20.1■□□□□ 0.81
VPS25-201ENST00000253794 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
VPS25-201ENST00000253794 ROBO2Q9HCK4 1378 aa20.09■□□□□ 0.81
VPS25-201ENST00000253794 LRRC7Q96NW7 1537 aa20.08■□□□□ 0.81
VPS25-201ENST00000253794 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
VPS25-201ENST00000253794 CARD11Q9BXL7 1154 aa20.06■□□□□ 0.8
VPS25-201ENST00000253794 STK26Q9P289 416 aa20.04■□□□□ 0.8
VPS25-201ENST00000253794 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
VPS25-201ENST00000253794 TMEM94Q12767 1356 aa20.03■□□□□ 0.8
VPS25-201ENST00000253794 TRAK1Q9UPV9 953 aa20.02■□□□□ 0.8
VPS25-201ENST00000253794 EIF3AQ14152 1382 aaKnown RBP20.02■□□□□ 0.8
VPS25-201ENST00000253794 PROSER2Q86WR7 435 aaPredicted RBP20.01■□□□□ 0.79
VPS25-201ENST00000253794 XIRP1Q702N8 1843 aaKnown RBP20■□□□□ 0.79
VPS25-201ENST00000253794 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
VPS25-201ENST00000253794 ADGRL3Q9HAR2 1447 aa20■□□□□ 0.79
VPS25-201ENST00000253794 SBNO2Q9Y2G9 1366 aa19.99■□□□□ 0.79
VPS25-201ENST00000253794 PRAM1Q96QH2 718 aa19.99■□□□□ 0.79
VPS25-201ENST00000253794 ADGRB2O60241 1585 aa19.99■□□□□ 0.79
VPS25-201ENST00000253794 USP47Q96K76 1375 aa19.98■□□□□ 0.79
VPS25-201ENST00000253794 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
VPS25-201ENST00000253794 DCCP43146 1447 aa19.98■□□□□ 0.79
VPS25-201ENST00000253794 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.97■□□□□ 0.79
VPS25-201ENST00000253794 CENPJQ9HC77 1338 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms