RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 DCAF11Q8TEB1 546 aa18.48■□□□□ 0.55
LSM8-201ENST00000249299 MADDQ8WXG6 1647 aa18.48■□□□□ 0.55
LSM8-201ENST00000249299 KIF1BO60333 1816 aa18.46■□□□□ 0.55
LSM8-201ENST00000249299 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
LSM8-201ENST00000249299 C3P01024 1663 aa18.45■□□□□ 0.54
LSM8-201ENST00000249299 KDM5AP29375 1690 aaKnown RBP18.45■□□□□ 0.54
LSM8-201ENST00000249299 ZFYVE9O95405 1425 aa18.45■□□□□ 0.54
LSM8-201ENST00000249299 MYOM2P54296 1465 aa18.45■□□□□ 0.54
LSM8-201ENST00000249299 PRAG1Q86YV5 1406 aa18.43■□□□□ 0.54
LSM8-201ENST00000249299 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
LSM8-201ENST00000249299 HDGFP51858 240 aaKnown RBP18.43■□□□□ 0.54
LSM8-201ENST00000249299 TMEM131LA2VDJ0 1609 aa18.42■□□□□ 0.54
LSM8-201ENST00000249299 CHGAP10645 457 aaKnown RBP18.42■□□□□ 0.54
LSM8-201ENST00000249299 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
LSM8-201ENST00000249299 ZNF326Q5BKZ1 582 aaKnown RBP18.42■□□□□ 0.54
LSM8-201ENST00000249299 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
LSM8-201ENST00000249299 A2ML1A8K2U0 1454 aa18.41■□□□□ 0.54
LSM8-201ENST00000249299 PTPRMP28827 1452 aa18.41■□□□□ 0.54
LSM8-201ENST00000249299 NRXN1Q9ULB1 1477 aa18.41■□□□□ 0.54
LSM8-201ENST00000249299 CFAP65Q6ZU64 1925 aaKnown RBP18.4■□□□□ 0.54
LSM8-201ENST00000249299 RIMS1Q86UR5 1692 aaKnown RBP18.4■□□□□ 0.54
LSM8-201ENST00000249299 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
LSM8-201ENST00000249299 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.4■□□□□ 0.54
LSM8-201ENST00000249299 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
LSM8-201ENST00000249299 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
LSM8-201ENST00000249299 THEMISQ8N1K5 641 aaPredicted RBP18.37■□□□□ 0.53
LSM8-201ENST00000249299 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
LSM8-201ENST00000249299 NEXMIFQ5QGS0 1516 aa18.36■□□□□ 0.53
LSM8-201ENST00000249299 SETD1BQ9UPS6 1966 aaKnown RBP18.35■□□□□ 0.53
LSM8-201ENST00000249299 TMEM2Q9UHN6 1383 aa18.35■□□□□ 0.53
LSM8-201ENST00000249299 IFT172Q9UG01 1749 aa18.34■□□□□ 0.53
LSM8-201ENST00000249299 PIK3C2GO75747 1445 aa18.33■□□□□ 0.52
LSM8-201ENST00000249299 RIMS2Q9UQ26 1411 aa18.32■□□□□ 0.52
LSM8-201ENST00000249299 PPLO60437 1756 aa18.32■□□□□ 0.52
LSM8-201ENST00000249299 ADGRF5Q8IZF2 1346 aa18.32■□□□□ 0.52
LSM8-201ENST00000249299 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
LSM8-201ENST00000249299 SLIT1O75093 1534 aa18.31■□□□□ 0.52
LSM8-201ENST00000249299 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
LSM8-201ENST00000249299 MYO3AQ8NEV4 1616 aa18.3■□□□□ 0.52
LSM8-201ENST00000249299 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
LSM8-201ENST00000249299 UBR1Q8IWV7 1749 aa18.3■□□□□ 0.52
LSM8-201ENST00000249299 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
LSM8-201ENST00000249299 ARHGAP23Q9P227 1491 aa18.3■□□□□ 0.52
LSM8-201ENST00000249299 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
LSM8-201ENST00000249299 CEP170BQ9Y4F5 1589 aaPredicted RBP18.29■□□□□ 0.52
LSM8-201ENST00000249299 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
LSM8-201ENST00000249299 EID1Q9Y6B2 187 aa18.28■□□□□ 0.52
LSM8-201ENST00000249299 LAMC1P11047 1609 aa18.28■□□□□ 0.52
LSM8-201ENST00000249299 TRPM1Q7Z4N2 1603 aa18.28■□□□□ 0.52
LSM8-201ENST00000249299 ZNF142P52746 1687 aaPredicted RBP18.28■□□□□ 0.52
LSM8-201ENST00000249299 CARD11Q9BXL7 1154 aa18.27■□□□□ 0.52
LSM8-201ENST00000249299 ZNF316A6NFI3 1004 aaPredicted RBP18.26■□□□□ 0.51
LSM8-201ENST00000249299 SETBP1Q9Y6X0 1596 aa18.26■□□□□ 0.51
LSM8-201ENST00000249299 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
LSM8-201ENST00000249299 PLEKHG1Q9ULL1 1385 aa18.24■□□□□ 0.51
LSM8-201ENST00000249299 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
LSM8-201ENST00000249299 NBPF1Q3BBV0 1214 aa18.23■□□□□ 0.51
LSM8-201ENST00000249299 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
LSM8-201ENST00000249299 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
LSM8-201ENST00000249299 USP47Q96K76 1375 aa18.22■□□□□ 0.51
LSM8-201ENST00000249299 MYO5BQ9ULV0 1848 aa18.22■□□□□ 0.51
LSM8-201ENST00000249299 SCAF11Q99590 1463 aaKnown RBP18.21■□□□□ 0.51
LSM8-201ENST00000249299 ANKLE2Q86XL3 938 aa18.21■□□□□ 0.51
LSM8-201ENST00000249299 LTKP29376 864 aa18.2■□□□□ 0.5
LSM8-201ENST00000249299 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
LSM8-201ENST00000249299 HSPA5P11021 654 aaKnown RBP18.19■□□□□ 0.5
LSM8-201ENST00000249299 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
LSM8-201ENST00000249299 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
LSM8-201ENST00000249299 TBX22Q9Y458 520 aa18.17■□□□□ 0.5
LSM8-201ENST00000249299 ALKQ9UM73 1620 aa18.17■□□□□ 0.5
LSM8-201ENST00000249299 MED14O60244 1454 aa18.15■□□□□ 0.5
LSM8-201ENST00000249299 PIK3R4Q99570 1358 aa18.14■□□□□ 0.49
LSM8-201ENST00000249299 SIRT1Q96EB6 747 aa18.14■□□□□ 0.49
LSM8-201ENST00000249299 DIP2AQ14689 1571 aa18.13■□□□□ 0.49
LSM8-201ENST00000249299 ADAMTS13Q76LX8 1427 aa18.13■□□□□ 0.49
LSM8-201ENST00000249299 SBNO2Q9Y2G9 1366 aa18.13■□□□□ 0.49
LSM8-201ENST00000249299 LRPPRCP42704 1394 aaKnown RBP18.12■□□□□ 0.49
LSM8-201ENST00000249299 ABCC11Q96J66 1382 aa18.12■□□□□ 0.49
LSM8-201ENST00000249299 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
LSM8-201ENST00000249299 IQGAP1P46940 1657 aa18.11■□□□□ 0.49
LSM8-201ENST00000249299 YTHDC2Q9H6S0 1430 aaKnown RBP18.11■□□□□ 0.49
LSM8-201ENST00000249299 NRXN3Q9Y4C0 1643 aa18.11■□□□□ 0.49
LSM8-201ENST00000249299 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
LSM8-201ENST00000249299 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
LSM8-201ENST00000249299 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
LSM8-201ENST00000249299 BCANQ96GW7 911 aa18.08■□□□□ 0.49
LSM8-201ENST00000249299 TESK2Q96S53 571 aa18.08■□□□□ 0.49
LSM8-201ENST00000249299 TECPR2O15040 1411 aa18.08■□□□□ 0.48
LSM8-201ENST00000249299 LMTK3Q96Q04 1460 aa18.07■□□□□ 0.48
LSM8-201ENST00000249299 METP08581 1390 aa18.07■□□□□ 0.48
LSM8-201ENST00000249299 SETD1AO15047 1707 aaKnown RBP18.07■□□□□ 0.48
LSM8-201ENST00000249299 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
LSM8-201ENST00000249299 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
LSM8-201ENST00000249299 CDCA8Q53HL2 280 aa18.06■□□□□ 0.48
LSM8-201ENST00000249299 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
LSM8-201ENST00000249299 TRAK1Q9UPV9 953 aa18.05■□□□□ 0.48
LSM8-201ENST00000249299 TMF1P82094 1093 aa18.04■□□□□ 0.48
LSM8-201ENST00000249299 PUS7Q96PZ0 661 aaKnown RBP18.04■□□□□ 0.48
LSM8-201ENST00000249299 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.48
LSM8-201ENST00000249299 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms