RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 PPP1R15AO75807 674 aaPredicted RBP31.78■■■□□ 2.68
HCFC1R1-201ENST00000248089 LRRC7Q96NW7 1537 aa31.78■■■□□ 2.68
HCFC1R1-201ENST00000248089 CLTCL1P53675 1640 aa31.75■■■□□ 2.67
HCFC1R1-201ENST00000248089 SLC26A8Q96RN1 970 aa31.75■■■□□ 2.67
HCFC1R1-201ENST00000248089 TRPM2O94759 1503 aa31.75■■■□□ 2.67
HCFC1R1-201ENST00000248089 PLEKHG1Q9ULL1 1385 aa31.72■■■□□ 2.67
HCFC1R1-201ENST00000248089 HDGFP51858 240 aaKnown RBP31.72■■■□□ 2.67
HCFC1R1-201ENST00000248089 XIRP1Q702N8 1843 aaKnown RBP31.72■■■□□ 2.67
HCFC1R1-201ENST00000248089 NUTM2DQ5VT03 806 aaPredicted RBP31.71■■■□□ 2.67
HCFC1R1-201ENST00000248089 SCAF1Q9H7N4 1312 aaKnown RBP31.71■■■□□ 2.67
HCFC1R1-201ENST00000248089 KIF1BO60333 1816 aa31.7■■■□□ 2.67
HCFC1R1-201ENST00000248089 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.69■■■□□ 2.66
HCFC1R1-201ENST00000248089 SLC4A1APQ9BWU0 796 aaKnown RBP31.68■■■□□ 2.66
HCFC1R1-201ENST00000248089 TOM1O60784 492 aa31.67■■■□□ 2.66
HCFC1R1-201ENST00000248089 NWD1Q149M9 1564 aa31.66■■■□□ 2.66
HCFC1R1-201ENST00000248089 PIP4K2BP78356 416 aa31.66■■■□□ 2.66
HCFC1R1-201ENST00000248089 ALKQ9UM73 1620 aa31.64■■■□□ 2.66
HCFC1R1-201ENST00000248089 CHD2O14647 1828 aaKnown RBP31.63■■■□□ 2.65
HCFC1R1-201ENST00000248089 ZNF326Q5BKZ1 582 aaKnown RBP31.63■■■□□ 2.65
HCFC1R1-201ENST00000248089 KCNA6P17658 529 aa31.62■■■□□ 2.65
HCFC1R1-201ENST00000248089 DIP2AQ14689 1571 aa31.61■■■□□ 2.65
HCFC1R1-201ENST00000248089 NKTRP30414 1462 aaKnown RBP31.6■■■□□ 2.65
HCFC1R1-201ENST00000248089 ADAMTS13Q76LX8 1427 aa31.57■■■□□ 2.64
HCFC1R1-201ENST00000248089 TMEM94Q12767 1356 aa31.56■■■□□ 2.64
HCFC1R1-201ENST00000248089 NEXMIFQ5QGS0 1516 aa31.55■■■□□ 2.64
HCFC1R1-201ENST00000248089 SETD5Q9C0A6 1442 aa31.55■■■□□ 2.64
HCFC1R1-201ENST00000248089 FOXD1Q16676 465 aa31.54■■■□□ 2.64
HCFC1R1-201ENST00000248089 PROSER2Q86WR7 435 aaPredicted RBP31.54■■■□□ 2.64
HCFC1R1-201ENST00000248089 NRXN3Q9Y4C0 1643 aa31.53■■■□□ 2.64
HCFC1R1-201ENST00000248089 RBM33Q96EV2 1170 aaKnown RBP31.52■■■□□ 2.64
HCFC1R1-201ENST00000248089 TBX22Q9Y458 520 aa31.52■■■□□ 2.64
HCFC1R1-201ENST00000248089 SETBP1Q9Y6X0 1596 aa31.51■■■□□ 2.63
HCFC1R1-201ENST00000248089 MPHOSPH9Q99550 1183 aa31.48■■■□□ 2.63
HCFC1R1-201ENST00000248089 HSPA1LP34931 641 aa31.47■■■□□ 2.63
HCFC1R1-201ENST00000248089 RAB3GAP2Q9H2M9 1393 aa31.45■■■□□ 2.63
HCFC1R1-201ENST00000248089 PPLO60437 1756 aa31.45■■■□□ 2.62
HCFC1R1-201ENST00000248089 PIK3R4Q99570 1358 aa31.44■■■□□ 2.62
HCFC1R1-201ENST00000248089 CCDC144AA2RUR9 1427 aa31.43■■■□□ 2.62
HCFC1R1-201ENST00000248089 ACIN1Q9UKV3 1341 aaKnown RBP31.41■■■□□ 2.62
HCFC1R1-201ENST00000248089 MSH6P52701 1360 aa31.4■■■□□ 2.62
HCFC1R1-201ENST00000248089 XRN1Q8IZH2 1706 aaKnown RBP31.39■■■□□ 2.62
HCFC1R1-201ENST00000248089 PTPRUQ92729 1446 aa31.39■■■□□ 2.62
HCFC1R1-201ENST00000248089 DISP3Q9P2K9 1392 aa31.37■■■□□ 2.61
HCFC1R1-201ENST00000248089 AMOTL2Q9Y2J4 779 aa31.36■■■□□ 2.61
HCFC1R1-201ENST00000248089 C14orf37Q86TY3 774 aa31.35■■■□□ 2.61
HCFC1R1-201ENST00000248089 ROBO1Q9Y6N7 1651 aa31.35■■■□□ 2.61
HCFC1R1-201ENST00000248089 SETD1AO15047 1707 aaKnown RBP31.34■■■□□ 2.61
HCFC1R1-201ENST00000248089 METP08581 1390 aa31.33■■■□□ 2.61
HCFC1R1-201ENST00000248089 VGFO15240 615 aaPredicted RBP31.33■■■□□ 2.61
HCFC1R1-201ENST00000248089 IFT172Q9UG01 1749 aa31.32■■■□□ 2.61
HCFC1R1-201ENST00000248089 RPGRIP1LQ68CZ1 1315 aa31.32■■■□□ 2.6
HCFC1R1-201ENST00000248089 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.32■■■□□ 2.6
HCFC1R1-201ENST00000248089 SPATA31E1Q6ZUB1 1445 aa31.29■■■□□ 2.6
HCFC1R1-201ENST00000248089 NCOA3Q9Y6Q9 1424 aa31.29■■■□□ 2.6
HCFC1R1-201ENST00000248089 RGL3Q3MIN7 710 aa31.28■■■□□ 2.6
HCFC1R1-201ENST00000248089 FAM135BQ49AJ0 1406 aa31.27■■■□□ 2.6
HCFC1R1-201ENST00000248089 MED1Q15648 1581 aaPredicted RBP31.24■■■□□ 2.59
HCFC1R1-201ENST00000248089 SLAIN2Q9P270 581 aa31.21■■■□□ 2.59
HCFC1R1-201ENST00000248089 NALCNQ8IZF0 1738 aa31.2■■■□□ 2.58
HCFC1R1-201ENST00000248089 C19orf44Q9H6X5 657 aa31.19■■■□□ 2.58
HCFC1R1-201ENST00000248089 ATF3P18847 181 aa31.18■■■□□ 2.58
HCFC1R1-201ENST00000248089 ADGRF5Q8IZF2 1346 aa31.18■■■□□ 2.58
HCFC1R1-201ENST00000248089 PHLPP1O60346 1717 aa31.18■■■□□ 2.58
HCFC1R1-201ENST00000248089 ANKRD30BQ9BXX2 1392 aa31.17■■■□□ 2.58
HCFC1R1-201ENST00000248089 CADPS2Q86UW7 1296 aa31.16■■■□□ 2.58
HCFC1R1-201ENST00000248089 DCCP43146 1447 aa31.13■■■□□ 2.57
HCFC1R1-201ENST00000248089 PTCH1Q13635 1447 aa31.13■■■□□ 2.57
HCFC1R1-201ENST00000248089 HRCP23327 699 aa31.12■■■□□ 2.57
HCFC1R1-201ENST00000248089 ADGRL3Q9HAR2 1447 aa31.12■■■□□ 2.57
HCFC1R1-201ENST00000248089 PIK3C2GO75747 1445 aa31.09■■■□□ 2.57
HCFC1R1-201ENST00000248089 ROBO2Q9HCK4 1378 aa31.09■■■□□ 2.57
HCFC1R1-201ENST00000248089 ASXL1Q8IXJ9 1541 aa31.06■■■□□ 2.56
HCFC1R1-201ENST00000248089 PRAG1Q86YV5 1406 aa31.06■■■□□ 2.56
HCFC1R1-201ENST00000248089 ILDR2Q71H61 639 aa31.05■■■□□ 2.56
HCFC1R1-201ENST00000248089 MYOM2P54296 1465 aa31.05■■■□□ 2.56
HCFC1R1-201ENST00000248089 COL16A1Q07092 1604 aaPredicted RBP31.05■■■□□ 2.56
HCFC1R1-201ENST00000248089 LAMC1P11047 1609 aa31.04■■■□□ 2.56
HCFC1R1-201ENST00000248089 MST1RQ04912 1400 aa31.04■■■□□ 2.56
HCFC1R1-201ENST00000248089 KNDC1Q76NI1 1749 aa31.03■■■□□ 2.56
HCFC1R1-201ENST00000248089 AHDC1Q5TGY3 1603 aaPredicted RBP31.02■■■□□ 2.56
HCFC1R1-201ENST00000248089 PHF23Q9BUL5 403 aaPredicted RBP31■■■□□ 2.55
HCFC1R1-201ENST00000248089 STK26Q9P289 416 aa31■■■□□ 2.55
HCFC1R1-201ENST00000248089 NRXN1Q9ULB1 1477 aa31■■■□□ 2.55
HCFC1R1-201ENST00000248089 TMEM132EQ6IEE7 984 aa30.98■■■□□ 2.55
HCFC1R1-201ENST00000248089 BRINP3Q76B58 766 aa30.98■■■□□ 2.55
HCFC1R1-201ENST00000248089 LRPPRCP42704 1394 aaKnown RBP30.96■■■□□ 2.55
HCFC1R1-201ENST00000248089 NHSL1Q5SYE7 1610 aa30.95■■■□□ 2.55
HCFC1R1-201ENST00000248089 TECPR2O15040 1411 aa30.94■■■□□ 2.54
HCFC1R1-201ENST00000248089 YTHDC2Q9H6S0 1430 aaKnown RBP30.93■■■□□ 2.54
HCFC1R1-201ENST00000248089 JCADQ9P266 1359 aa30.92■■■□□ 2.54
HCFC1R1-201ENST00000248089 CFAP70Q5T0N1 1121 aa30.91■■■□□ 2.54
HCFC1R1-201ENST00000248089 C14orf93Q9H972 538 aaKnown RBP30.91■■■□□ 2.54
HCFC1R1-201ENST00000248089 CDC42BPGQ6DT37 1551 aa30.91■■■□□ 2.54
HCFC1R1-201ENST00000248089 ABCC11Q96J66 1382 aa30.9■■■□□ 2.54
HCFC1R1-201ENST00000248089 C1orf167Q5SNV9 1468 aa30.89■■■□□ 2.54
HCFC1R1-201ENST00000248089 SHPRHQ149N8 1683 aa30.89■■■□□ 2.54
HCFC1R1-201ENST00000248089 DCAF11Q8TEB1 546 aa30.88■■■□□ 2.53
HCFC1R1-201ENST00000248089 KDM2AQ9Y2K7 1162 aa30.88■■■□□ 2.53
HCFC1R1-201ENST00000248089 WAPLQ7Z5K2 1190 aa30.87■■■□□ 2.53
HCFC1R1-201ENST00000248089 PLEKHH1Q9ULM0 1364 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms