RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 CDCA8Q53HL2 280 aa20.5■□□□□ 0.87
DDX49-201ENST00000247003 ADGRB3O60242 1522 aa20.5■□□□□ 0.87
DDX49-201ENST00000247003 GGT6Q6P531 493 aa20.49■□□□□ 0.87
DDX49-201ENST00000247003 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
DDX49-201ENST00000247003 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
DDX49-201ENST00000247003 ABCC3O15438 1527 aa20.48■□□□□ 0.87
DDX49-201ENST00000247003 NPATQ14207 1427 aa20.48■□□□□ 0.87
DDX49-201ENST00000247003 PARD3Q8TEW0 1356 aa20.48■□□□□ 0.87
DDX49-201ENST00000247003 ZC3H13Q5T200 1668 aaKnown RBP20.47■□□□□ 0.87
DDX49-201ENST00000247003 SYNMO15061 1565 aa20.46■□□□□ 0.87
DDX49-201ENST00000247003 NLRP13Q86W25 1043 aa20.46■□□□□ 0.87
DDX49-201ENST00000247003 SLC24A1O60721 1099 aa20.45■□□□□ 0.86
DDX49-201ENST00000247003 RAPGEF3O95398 923 aa20.45■□□□□ 0.86
DDX49-201ENST00000247003 PNISRQ8TF01 805 aaKnown RBP20.45■□□□□ 0.86
DDX49-201ENST00000247003 FAM69CQ0P6D2 419 aa20.44■□□□□ 0.86
DDX49-201ENST00000247003 KDM5AP29375 1690 aaKnown RBP20.43■□□□□ 0.86
DDX49-201ENST00000247003 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
DDX49-201ENST00000247003 PANK3Q9H999 370 aa20.43■□□□□ 0.86
DDX49-201ENST00000247003 NRXN1Q9ULB1 1477 aa20.42■□□□□ 0.86
DDX49-201ENST00000247003 PPLO60437 1756 aa20.41■□□□□ 0.86
DDX49-201ENST00000247003 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
DDX49-201ENST00000247003 LRPPRCP42704 1394 aaKnown RBP20.41■□□□□ 0.86
DDX49-201ENST00000247003 TSPOAP1O95153 1857 aa20.4■□□□□ 0.86
DDX49-201ENST00000247003 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
DDX49-201ENST00000247003 NOS1P29475 1434 aa20.39■□□□□ 0.85
DDX49-201ENST00000247003 ADGRF5Q8IZF2 1346 aa20.39■□□□□ 0.85
DDX49-201ENST00000247003 CFAP65Q6ZU64 1925 aaKnown RBP20.39■□□□□ 0.85
DDX49-201ENST00000247003 ERICH6BQ5W0A0 696 aa20.39■□□□□ 0.85
DDX49-201ENST00000247003 SMG6Q86US8 1419 aaKnown RBP20.38■□□□□ 0.85
DDX49-201ENST00000247003 MYO3AQ8NEV4 1616 aa20.38■□□□□ 0.85
DDX49-201ENST00000247003 CFAP70Q5T0N1 1121 aa20.38■□□□□ 0.85
DDX49-201ENST00000247003 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
DDX49-201ENST00000247003 CC2D1BQ5T0F9 858 aaKnown RBP20.37■□□□□ 0.85
DDX49-201ENST00000247003 RPGRIP1LQ68CZ1 1315 aa20.37■□□□□ 0.85
DDX49-201ENST00000247003 MYOM1P52179 1685 aa20.36■□□□□ 0.85
DDX49-201ENST00000247003 PIK3C2BO00750 1634 aa20.36■□□□□ 0.85
DDX49-201ENST00000247003 KNSTRNQ9Y448 316 aa20.36■□□□□ 0.85
DDX49-201ENST00000247003 ARHGAP31Q2M1Z3 1444 aa20.35■□□□□ 0.85
DDX49-201ENST00000247003 SIGLEC1Q9BZZ2 1709 aa20.35■□□□□ 0.85
DDX49-201ENST00000247003 PIK3C2GO75747 1445 aa20.34■□□□□ 0.85
DDX49-201ENST00000247003 YEATS2Q9ULM3 1422 aa20.34■□□□□ 0.85
DDX49-201ENST00000247003 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
DDX49-201ENST00000247003 ASXL1Q8IXJ9 1541 aa20.32■□□□□ 0.84
DDX49-201ENST00000247003 IRX6P78412 446 aaPredicted RBP20.31■□□□□ 0.84
DDX49-201ENST00000247003 SBNO2Q9Y2G9 1366 aa20.31■□□□□ 0.84
DDX49-201ENST00000247003 ERVK-7P63135 1459 aa20.3■□□□□ 0.84
DDX49-201ENST00000247003 INSRP06213 1382 aa20.3■□□□□ 0.84
DDX49-201ENST00000247003 PREX1Q8TCU6 1659 aa20.27■□□□□ 0.84
DDX49-201ENST00000247003 QRICH2Q9H0J4 1663 aa20.27■□□□□ 0.84
DDX49-201ENST00000247003 CENPJQ9HC77 1338 aaPredicted RBP20.27■□□□□ 0.84
DDX49-201ENST00000247003 NEXMIFQ5QGS0 1516 aa20.26■□□□□ 0.83
DDX49-201ENST00000247003 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
DDX49-201ENST00000247003 NPC1L1Q9UHC9 1359 aa20.26■□□□□ 0.83
DDX49-201ENST00000247003 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
DDX49-201ENST00000247003 ADGRB1O14514 1584 aa20.25■□□□□ 0.83
DDX49-201ENST00000247003 VGFO15240 615 aaPredicted RBP20.25■□□□□ 0.83
DDX49-201ENST00000247003 PPP4R2Q9NY27 417 aa20.25■□□□□ 0.83
DDX49-201ENST00000247003 TSHZ2Q9NRE2 1034 aa20.24■□□□□ 0.83
DDX49-201ENST00000247003 SLC52A1Q9NWF4 448 aa20.24■□□□□ 0.83
DDX49-201ENST00000247003 BLMP54132 1417 aaPredicted RBP20.23■□□□□ 0.83
DDX49-201ENST00000247003 AMER1Q5JTC6 1135 aaPredicted RBP20.23■□□□□ 0.83
DDX49-201ENST00000247003 PDE3BQ13370 1112 aa20.21■□□□□ 0.83
DDX49-201ENST00000247003 TRAK1Q9UPV9 953 aa20.2■□□□□ 0.82
DDX49-201ENST00000247003 AGLP35573 1532 aa20.2■□□□□ 0.82
DDX49-201ENST00000247003 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
DDX49-201ENST00000247003 WDR43Q15061 677 aaKnown RBP eCLIP20.18■□□□□ 0.82
DDX49-201ENST00000247003 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
DDX49-201ENST00000247003 SENP3-EIF4A1A0A087X0R7 540 aa20.18■□□□□ 0.82
DDX49-201ENST00000247003 TRHP20396 242 aaPredicted RBP20.18■□□□□ 0.82
DDX49-201ENST00000247003 ARHGEF28Q8N1W1 1705 aaKnown RBP20.17■□□□□ 0.82
DDX49-201ENST00000247003 TMEM131LA2VDJ0 1609 aa20.17■□□□□ 0.82
DDX49-201ENST00000247003 IDI1Q13907 227 aa20.17■□□□□ 0.82
DDX49-201ENST00000247003 MYO5BQ9ULV0 1848 aa20.16■□□□□ 0.82
DDX49-201ENST00000247003 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
DDX49-201ENST00000247003 TMEM132EQ6IEE7 984 aa20.15■□□□□ 0.82
DDX49-201ENST00000247003 RNF123Q5XPI4 1314 aa20.15■□□□□ 0.82
DDX49-201ENST00000247003 SALL2Q9Y467 1007 aaPredicted RBP20.13■□□□□ 0.81
DDX49-201ENST00000247003 CLTCQ00610 1675 aaKnown RBP20.13■□□□□ 0.81
DDX49-201ENST00000247003 ARHGEF40Q8TER5 1519 aa20.12■□□□□ 0.81
DDX49-201ENST00000247003 NUTM2DQ5VT03 806 aaPredicted RBP20.12■□□□□ 0.81
DDX49-201ENST00000247003 EVC2Q86UK5 1308 aa20.1■□□□□ 0.81
DDX49-201ENST00000247003 STAG3Q9UJ98 1225 aa20.09■□□□□ 0.81
DDX49-201ENST00000247003 USP32Q8NFA0 1604 aa20.09■□□□□ 0.81
DDX49-201ENST00000247003 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
DDX49-201ENST00000247003 PUS7Q96PZ0 661 aaKnown RBP20.08■□□□□ 0.8
DDX49-201ENST00000247003 NSD3Q9BZ95 1437 aa20.08■□□□□ 0.8
DDX49-201ENST00000247003 CARD14Q9BXL6 1004 aa20.06■□□□□ 0.8
DDX49-201ENST00000247003 RCAN3Q9UKA8 241 aa20.06■□□□□ 0.8
DDX49-201ENST00000247003 SPATA31D1Q6ZQQ2 1576 aa20.06■□□□□ 0.8
DDX49-201ENST00000247003 TULP4Q9NRJ4 1543 aa20.06■□□□□ 0.8
DDX49-201ENST00000247003 B4GALNT3Q6L9W6 998 aa20.05■□□□□ 0.8
DDX49-201ENST00000247003 FBXO31Q5XUX0 539 aaPredicted RBP20.04■□□□□ 0.8
DDX49-201ENST00000247003 RRP1P56182 461 aaKnown RBP20.04■□□□□ 0.8
DDX49-201ENST00000247003 NINLQ9Y2I6 1382 aa20.02■□□□□ 0.8
DDX49-201ENST00000247003 ESF1Q9H501 851 aaKnown RBP20.02■□□□□ 0.79
DDX49-201ENST00000247003 ANKRD36BQ8N2N9 1353 aa20.01■□□□□ 0.79
DDX49-201ENST00000247003 MORC1Q86VD1 984 aa20.01■□□□□ 0.79
DDX49-201ENST00000247003 SLC12A5Q9H2X9 1139 aa20.01■□□□□ 0.79
DDX49-201ENST00000247003 CGNL1Q0VF96 1302 aa20.01■□□□□ 0.79
DDX49-201ENST00000247003 ALKQ9UM73 1620 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms