RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 PLCH2O75038 1416 aa15.9■□□□□ 0.14
SEC61A1-201ENST00000243253 MROH1Q8NDA8 1641 aa15.89■□□□□ 0.13
SEC61A1-201ENST00000243253 MYO3AQ8NEV4 1616 aa15.89■□□□□ 0.13
SEC61A1-201ENST00000243253 ANP32AP39687 249 aaKnown RBP15.89■□□□□ 0.13
SEC61A1-201ENST00000243253 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
SEC61A1-201ENST00000243253 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
SEC61A1-201ENST00000243253 INO80Q9ULG1 1556 aaPredicted RBP15.87■□□□□ 0.13
SEC61A1-201ENST00000243253 KDM5AP29375 1690 aaKnown RBP15.87■□□□□ 0.13
SEC61A1-201ENST00000243253 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
SEC61A1-201ENST00000243253 PLIN1O60240 522 aa15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 TRMT2AQ8IZ69 625 aaKnown RBP15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 PIK3C2GO75747 1445 aa15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 C20orf194Q5TEA3 1177 aa15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 ASXL1Q8IXJ9 1541 aa15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 TRAPPC8Q9Y2L5 1435 aa15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 DUSP27Q5VZP5 1158 aa15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 UHRF1BP1LA0JNW5 1464 aa15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
SEC61A1-201ENST00000243253 ZC3H13Q5T200 1668 aaKnown RBP15.85■□□□□ 0.13
SEC61A1-201ENST00000243253 NPC1L1Q9UHC9 1359 aa15.85■□□□□ 0.13
SEC61A1-201ENST00000243253 SKAP1Q86WV1 359 aa15.85■□□□□ 0.13
SEC61A1-201ENST00000243253 ZBTB47Q9UFB7 747 aaPredicted RBP15.85■□□□□ 0.13
SEC61A1-201ENST00000243253 ABCA6Q8N139 1617 aa15.85■□□□□ 0.13
SEC61A1-201ENST00000243253 ADAMTS8Q9UP79 889 aa15.85■□□□□ 0.13
SEC61A1-201ENST00000243253 CRBNQ96SW2 442 aa15.84■□□□□ 0.13
SEC61A1-201ENST00000243253 ABCA9Q8IUA7 1624 aa15.84■□□□□ 0.13
SEC61A1-201ENST00000243253 SCAF11Q99590 1463 aaKnown RBP15.84■□□□□ 0.13
SEC61A1-201ENST00000243253 MROH2AA6NES4 1674 aa15.84■□□□□ 0.13
SEC61A1-201ENST00000243253 MAP3K4Q9Y6R4 1608 aa15.83■□□□□ 0.13
SEC61A1-201ENST00000243253 RTEL1-TNFRSF6BF6WH68 1400 aa15.83■□□□□ 0.12
SEC61A1-201ENST00000243253 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
SEC61A1-201ENST00000243253 TMF1P82094 1093 aa15.81■□□□□ 0.12
SEC61A1-201ENST00000243253 NRXN1Q9ULB1 1477 aa15.81■□□□□ 0.12
SEC61A1-201ENST00000243253 ERVK-7P63135 1459 aa15.79■□□□□ 0.12
SEC61A1-201ENST00000243253 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
SEC61A1-201ENST00000243253 MYOM2P54296 1465 aa15.78■□□□□ 0.12
SEC61A1-201ENST00000243253 KIF1BO60333 1816 aa15.76■□□□□ 0.11
SEC61A1-201ENST00000243253 C8orf34Q49A92 452 aa15.76■□□□□ 0.11
SEC61A1-201ENST00000243253 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
SEC61A1-201ENST00000243253 USP35Q9P2H5 1018 aa15.75■□□□□ 0.11
SEC61A1-201ENST00000243253 SLFN5Q08AF3 891 aa15.74■□□□□ 0.11
SEC61A1-201ENST00000243253 UGGT1Q9NYU2 1555 aa15.74■□□□□ 0.11
SEC61A1-201ENST00000243253 USP32Q8NFA0 1604 aa15.74■□□□□ 0.11
SEC61A1-201ENST00000243253 PPRC1Q5VV67 1664 aaKnown RBP15.73■□□□□ 0.11
SEC61A1-201ENST00000243253 NUTM2DQ5VT03 806 aaPredicted RBP15.73■□□□□ 0.11
SEC61A1-201ENST00000243253 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
SEC61A1-201ENST00000243253 SETBP1Q9Y6X0 1596 aa15.72■□□□□ 0.11
SEC61A1-201ENST00000243253 PPLO60437 1756 aa15.72■□□□□ 0.11
SEC61A1-201ENST00000243253 EFCAB6Q5THR3 1501 aa15.72■□□□□ 0.11
SEC61A1-201ENST00000243253 NKTRP30414 1462 aaKnown RBP15.71■□□□□ 0.11
SEC61A1-201ENST00000243253 KIDINS220Q9ULH0 1771 aa15.71■□□□□ 0.11
SEC61A1-201ENST00000243253 NEUROD2Q15784 382 aa15.71■□□□□ 0.11
SEC61A1-201ENST00000243253 STAC3Q96MF2 364 aa15.71■□□□□ 0.11
SEC61A1-201ENST00000243253 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.11
SEC61A1-201ENST00000243253 EIF3AQ14152 1382 aaKnown RBP15.71■□□□□ 0.11
SEC61A1-201ENST00000243253 NLRP1Q9C000 1473 aa15.7■□□□□ 0.1
SEC61A1-201ENST00000243253 CENPQQ7L2Z9 268 aaPredicted RBP15.7■□□□□ 0.1
SEC61A1-201ENST00000243253 LMTK2Q8IWU2 1503 aa15.69■□□□□ 0.1
SEC61A1-201ENST00000243253 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
SEC61A1-201ENST00000243253 ADGRB3O60242 1522 aa15.69■□□□□ 0.1
SEC61A1-201ENST00000243253 CARD14Q9BXL6 1004 aa15.68■□□□□ 0.1
SEC61A1-201ENST00000243253 SBNO2Q9Y2G9 1366 aa15.67■□□□□ 0.1
SEC61A1-201ENST00000243253 ADGRB1O14514 1584 aa15.67■□□□□ 0.1
SEC61A1-201ENST00000243253 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
SEC61A1-201ENST00000243253 GOLGA2Q08379 1002 aa15.67■□□□□ 0.1
SEC61A1-201ENST00000243253 SAFB2Q14151 953 aaKnown RBP eCLIP15.67■□□□□ 0.1
SEC61A1-201ENST00000243253 USP19O94966 1318 aa15.67■□□□□ 0.1
SEC61A1-201ENST00000243253 CCDC146Q8IYE0 955 aa15.66■□□□□ 0.1
SEC61A1-201ENST00000243253 KNSTRNQ9Y448 316 aa15.66■□□□□ 0.1
SEC61A1-201ENST00000243253 LAS1LQ9Y4W2 734 aaKnown RBP15.65■□□□□ 0.1
SEC61A1-201ENST00000243253 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.1
SEC61A1-201ENST00000243253 NEFMP07197 916 aa15.64■□□□□ 0.09
SEC61A1-201ENST00000243253 AFAP1Q8N556 730 aa15.64■□□□□ 0.09
SEC61A1-201ENST00000243253 POLR3AO14802 1390 aaPredicted RBP15.63■□□□□ 0.09
SEC61A1-201ENST00000243253 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
SEC61A1-201ENST00000243253 FAM161AQ3B820 660 aa15.62■□□□□ 0.09
SEC61A1-201ENST00000243253 ADGRB2O60241 1585 aa15.62■□□□□ 0.09
SEC61A1-201ENST00000243253 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 FRMPD1Q5SYB0 1578 aa15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 RTL5Q5HYW3 569 aaPredicted RBP15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 IL27Q8NEV9 243 aa15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 SIGLEC1Q9BZZ2 1709 aa15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 BCAR3O75815 825 aa15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 CDCA8Q53HL2 280 aa15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 DDRGK1Q96HY6 314 aa15.61■□□□□ 0.09
SEC61A1-201ENST00000243253 FANCAO15360 1455 aa15.6■□□□□ 0.09
SEC61A1-201ENST00000243253 ADGRF5Q8IZF2 1346 aa15.6■□□□□ 0.09
SEC61A1-201ENST00000243253 IGHDP01880 384 aa15.6■□□□□ 0.09
SEC61A1-201ENST00000243253 ARHGEF28Q8N1W1 1705 aaKnown RBP15.6■□□□□ 0.09
SEC61A1-201ENST00000243253 SPAG9O60271 1321 aaKnown RBP15.6■□□□□ 0.09
SEC61A1-201ENST00000243253 PIK3C2BO00750 1634 aa15.59■□□□□ 0.09
SEC61A1-201ENST00000243253 WDR43Q15061 677 aaKnown RBP eCLIP15.59■□□□□ 0.09
SEC61A1-201ENST00000243253 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
SEC61A1-201ENST00000243253 NFKBIBQ15653 356 aa15.58■□□□□ 0.09
SEC61A1-201ENST00000243253 APAF1O14727 1248 aa15.58■□□□□ 0.08
SEC61A1-201ENST00000243253 RGS3P49796 1198 aa15.57■□□□□ 0.08
SEC61A1-201ENST00000243253 CFAP70Q5T0N1 1121 aa15.56■□□□□ 0.08
SEC61A1-201ENST00000243253 SLC4A3P48751 1232 aa15.56■□□□□ 0.08
SEC61A1-201ENST00000243253 E9PSI1 815 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms