RNA–Protein interactions for RNA: ENST00000242059.9

SCRN1-201, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN1, Length 5,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-201ENST00000242059 KIF6Q6ZMV9 814 aa11.94□□□□□ -0.5
SCRN1-201ENST00000242059 NGEFQ8N5V2 710 aa11.94□□□□□ -0.5
SCRN1-201ENST00000242059 RAD21O60216 631 aa11.94□□□□□ -0.5
SCRN1-201ENST00000242059 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
SCRN1-201ENST00000242059 CFTRP13569 1480 aa11.94□□□□□ -0.5
SCRN1-201ENST00000242059 DIAPH1O60610 1272 aaKnown RBP11.94□□□□□ -0.5
SCRN1-201ENST00000242059 CPLX2Q6PUV4 134 aaKnown RBP11.93□□□□□ -0.5
SCRN1-201ENST00000242059 TPRNQ4KMQ1 711 aa11.93□□□□□ -0.5
SCRN1-201ENST00000242059 CEP89Q96ST8 783 aa11.93□□□□□ -0.5
SCRN1-201ENST00000242059 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
SCRN1-201ENST00000242059 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
SCRN1-201ENST00000242059 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
SCRN1-201ENST00000242059 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
SCRN1-201ENST00000242059 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
SCRN1-201ENST00000242059 AFAP1Q8N556 730 aa11.91□□□□□ -0.5
SCRN1-201ENST00000242059 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
SCRN1-201ENST00000242059 CCDC43Q96MW1 224 aaKnown RBP11.91□□□□□ -0.5
SCRN1-201ENST00000242059 NGLY1Q96IV0 654 aa11.91□□□□□ -0.5
SCRN1-201ENST00000242059 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
SCRN1-201ENST00000242059 DHX16O60231 1041 aaKnown RBP11.9□□□□□ -0.5
SCRN1-201ENST00000242059 LRPPRCP42704 1394 aaKnown RBP11.9□□□□□ -0.5
SCRN1-201ENST00000242059 UBAP1LF5GYI3 381 aa11.89□□□□□ -0.51
SCRN1-201ENST00000242059 RRBP1Q9P2E9 1410 aaKnown RBP11.89□□□□□ -0.51
SCRN1-201ENST00000242059 TPM4P67936 248 aa11.89□□□□□ -0.51
SCRN1-201ENST00000242059 L3MBTL2Q969R5 705 aa11.89□□□□□ -0.51
SCRN1-201ENST00000242059 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
SCRN1-201ENST00000242059 GAS2L2Q8NHY3 880 aa11.89□□□□□ -0.51
SCRN1-201ENST00000242059 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
SCRN1-201ENST00000242059 HSP90AB4PQ58FF6 505 aa11.88□□□□□ -0.51
SCRN1-201ENST00000242059 RAB3GAP2Q9H2M9 1393 aa11.88□□□□□ -0.51
SCRN1-201ENST00000242059 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
SCRN1-201ENST00000242059 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
SCRN1-201ENST00000242059 ZNF644Q9H582 1327 aaPredicted RBP11.87□□□□□ -0.51
SCRN1-201ENST00000242059 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
SCRN1-201ENST00000242059 G3BP1Q13283 466 aaKnown RBP eCLIP11.87□□□□□ -0.512e-7■■■□□ 14.6
SCRN1-201ENST00000242059 R3HCC1Q9Y3T6 440 aaKnown RBP11.87□□□□□ -0.51
SCRN1-201ENST00000242059 GNL3LQ9NVN8 582 aaKnown RBP11.87□□□□□ -0.51
SCRN1-201ENST00000242059 AKNAQ7Z591 1439 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 RPGRIP1LQ68CZ1 1315 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 CSPP1Q1MSJ5 1256 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 TRDNQ13061 729 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 RUFY2Q8WXA3 655 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 CUX1P39880 1505 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 CD109Q6YHK3 1445 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
SCRN1-201ENST00000242059 SNAPC4Q5SXM2 1469 aa11.85□□□□□ -0.51
SCRN1-201ENST00000242059 ERICH2A1L162 156 aa11.85□□□□□ -0.51
SCRN1-201ENST00000242059 RAPGEF3O95398 923 aa11.85□□□□□ -0.51
SCRN1-201ENST00000242059 NUTM2GQ5VZR2 741 aa11.85□□□□□ -0.51
SCRN1-201ENST00000242059 NAP1L5Q96NT1 182 aaPredicted RBP11.85□□□□□ -0.51
SCRN1-201ENST00000242059 CCER2I3L3R5 266 aa11.85□□□□□ -0.51
SCRN1-201ENST00000242059 CABP4P57796 275 aa11.85□□□□□ -0.51
SCRN1-201ENST00000242059 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
SCRN1-201ENST00000242059 PNISRQ8TF01 805 aaKnown RBP11.85□□□□□ -0.51
SCRN1-201ENST00000242059 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
SCRN1-201ENST00000242059 PKNOX2Q96KN3 472 aa11.84□□□□□ -0.51
SCRN1-201ENST00000242059 API5Q9BZZ5 524 aaKnown RBP11.84□□□□□ -0.51
SCRN1-201ENST00000242059 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
SCRN1-201ENST00000242059 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
SCRN1-201ENST00000242059 TOPBP1Q92547 1522 aa11.84□□□□□ -0.51
SCRN1-201ENST00000242059 APPP05067 770 aa11.84□□□□□ -0.51
SCRN1-201ENST00000242059 TSPYL4Q9UJ04 414 aa11.84□□□□□ -0.51
SCRN1-201ENST00000242059 IFIT2P09913 472 aaKnown RBP11.83□□□□□ -0.52
SCRN1-201ENST00000242059 PTMSP20962 102 aa11.83□□□□□ -0.52
SCRN1-201ENST00000242059 GNAI1P63096 354 aa11.83□□□□□ -0.52
SCRN1-201ENST00000242059 DDX54Q8TDD1 881 aaKnown RBP11.83□□□□□ -0.52
SCRN1-201ENST00000242059 TMOD2Q9NZR1 351 aa11.83□□□□□ -0.52
SCRN1-201ENST00000242059 SLC3A2P08195 630 aaKnown RBP11.82□□□□□ -0.52
SCRN1-201ENST00000242059 NBPF8Q3BBV2 869 aa11.82□□□□□ -0.52
SCRN1-201ENST00000242059 NBPF14Q5TI25 921 aa11.82□□□□□ -0.52
SCRN1-201ENST00000242059 PANK3Q9H999 370 aa11.82□□□□□ -0.52
SCRN1-201ENST00000242059 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
SCRN1-201ENST00000242059 ANKRD50Q9ULJ7 1429 aa11.82□□□□□ -0.52
SCRN1-201ENST00000242059 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
SCRN1-201ENST00000242059 ZNF652Q9Y2D9 606 aa11.82□□□□□ -0.52
SCRN1-201ENST00000242059 DNTTIP2Q5QJE6 756 aaKnown RBP11.81□□□□□ -0.52
SCRN1-201ENST00000242059 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
SCRN1-201ENST00000242059 ST20-MTHFSA0A0A6YYL1 179 aa11.81□□□□□ -0.52
SCRN1-201ENST00000242059 TRIM29Q14134 588 aa11.81□□□□□ -0.52
SCRN1-201ENST00000242059 PAXIP1Q6ZW49 1069 aaPredicted RBP11.81□□□□□ -0.52
SCRN1-201ENST00000242059 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
SCRN1-201ENST00000242059 TEX14Q8IWB6 1497 aa11.81□□□□□ -0.52
SCRN1-201ENST00000242059 FKBP5Q13451 457 aaPredicted RBP11.81□□□□□ -0.52
SCRN1-201ENST00000242059 TBC1D2BQ9UPU7 963 aa11.81□□□□□ -0.52
SCRN1-201ENST00000242059 IKQ13123 557 aaPredicted RBP11.8□□□□□ -0.52
SCRN1-201ENST00000242059 DIAPH3Q9NSV4 1193 aa11.8□□□□□ -0.52
SCRN1-201ENST00000242059 TPM2P07951 284 aa11.8□□□□□ -0.52
SCRN1-201ENST00000242059 CCDC27Q2M243 656 aa11.8□□□□□ -0.52
SCRN1-201ENST00000242059 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
SCRN1-201ENST00000242059 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
SCRN1-201ENST00000242059 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
SCRN1-201ENST00000242059 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
SCRN1-201ENST00000242059 ADAMTS2O95450 1211 aa11.79□□□□□ -0.52
SCRN1-201ENST00000242059 MFAP1P55081 439 aaKnown RBP11.78□□□□□ -0.52
SCRN1-201ENST00000242059 RRP7AQ9Y3A4 280 aaKnown RBP11.78□□□□□ -0.52
SCRN1-201ENST00000242059 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
SCRN1-201ENST00000242059 ZPR1O75312 459 aa11.78□□□□□ -0.52
SCRN1-201ENST00000242059 SYAP1Q96A49 352 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms